FFCP PHASE1:Mm9::chr13:83663500..83663519,+: Difference between revisions
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{{FFCP|EntrezGene=17260|HGNC=|MCL_coexpression_id=2|UniProt=Q8C895|association_with_transcript=-390bp_to_uc007rif.1_5end|description=CAGE_peak_8_at_Mef2c_5end|id=chr13:83663500..83663519,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!4.99e-10!21;UBERON:0001869!4.99e-10!21;UBERON:0000203!4.99e-10!21;UBERON:0002021!1.68e-09!10;UBERON:0000411!1.68e-09!10;UBERON:0001950!1.68e-09!10;UBERON:0002619!7.59e-09!17;UBERON:0002791!1.59e-08!29;UBERON:0003528!1.59e-08!29;UBERON:0001893!1.59e-08!29;UBERON:0002020!1.16e-07!34;UBERON:0000955!6.74e-07!50;UBERON:0006238!6.74e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.73e-30,10;UBERON:0000411,4.73e-30,10;UBERON:0001950,4.73e-30,10;UBERON:0002619,7.87e-24,17;UBERON:0000956,3.53e-22,21;UBERON:0001869,3.53e-22,21;UBERON:0000203,3.53e-22,21;UBERON:0003528,2.05e-20,29;UBERON:0002791,2.05e-20,29;UBERON:0001893,2.05e-20,29;UBERON:0002020,6.43e-17,34;UBERON:0002780,2.19e-16,39;UBERON:0001890,2.19e-16,39;UBERON:0006240,2.19e-16,39;UBERON:0003080,6.90e-16,40;UBERON:0000955,7.34e-15,47;UBERON:0006238,7.34e-15,47;UBERON:0002616,2.39e-13,46;UBERON:0003056,2.59e-12,49;UBERON:0000073,2.67e-12,54;UBERON:0001049,2.13e-11,52;UBERON:0005068,2.13e-11,52;UBERON:0006241,2.13e-11,52;UBERON:0007135,2.13e-11,52;UBERON:0001017,2.50e-09,73;UBERON:0001016,5.63e-09,75;UBERON:0002346,1.32e-08,64;UBERON:0003075,1.32e-08,64;UBERON:0007284,1.32e-08,64;UBERON:0010371,4.03e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,3.3123527362615,5.07323404341233,2.12194825899015,1.9559956734746,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,6.37573903019398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,0,0.220868540951614,0.367472397644862,0.0958454710182364,1.83843757322004,0,0.766124028511126,1.0752457327937,0,0.365950574409639,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.10725460376606,0,0.346970653532272,0,0,0,0.470354828542819,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0.958520996047362,0,0.508280908292259,0.299581278809645,3.66000482254901,1.63350657746724,13.0368240144207,12.2743419518559,0.62336413367868,1.94689515681309,0.203678727700633,0.248813941220186,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0.702213187313235,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,1.68231958851302,0.617427674275707,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.678980343100753,0.469380496577004,0.335012514883631,0.238043640886014,0,0.472905432318573,0,0,0.327726629431476,0,0,1.50791283939272,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0.430846795465598,0.955875191810208,0.222798674082394,0.566153061577665,0,0.292255857911312,0.395287777946524,5.78378369559253,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0.32977250588296,0.484393280087717,0.180938774784468,0,0,0,0.18542530201051,1.19609616558497,0,0.185194527369712,0.188368457004691,1.23024804948923,0.457556346413045,1.01987057996313,1.39951452323658,0.967399816630967,0,0,0.203319467126849,0,0,0,0,0.247960367176008,0,0,0,0,0.747582730219894,0,0.388902376688095,0,0.675824501963113,0.704143431874524,0.13020438484395,0.314578033277133,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0,0,0,41.7916363536629,41.8895965221531,40.6755814541972,44.1662678623277,21.2375581128899,30.9711497929777,29.0259675099676,24.7676661773321,19.938265995305,22.7814537170801,0.103787347584177,0,0.170733605754134,0,0.628839487883947,0.367687016900028,0.222246727801615,0,0.962757628775446,0.505394423527595,0.50695859978048,0.754505365544305,0.842773567228942,0.128050304809739,0.402048282689293,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0.953744759789284,0.290692833264657,0.282328141245992,0.507687647350059,0,0,0,1.12228454331548,0.474540072496697,0.197008964751127,1.22769312950907,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0.57386499620653,0,0.231867835620421|short_description=p8@Mef2c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17260 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C895 | |||
|association_with_transcript=-390bp_to_uc007rif.1_5end | |||
|cluster_id=chr13:83663500..83663519,+ | |||
|description=CAGE_peak_8_at_Mef2c_5end | |||
|id=chr13:83663500..83663519,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!4.99e-10!21;UBERON:0001869!4.99e-10!21;UBERON:0000203!4.99e-10!21;UBERON:0002021!1.68e-09!10;UBERON:0000411!1.68e-09!10;UBERON:0001950!1.68e-09!10;UBERON:0002619!7.59e-09!17;UBERON:0002791!1.59e-08!29;UBERON:0003528!1.59e-08!29;UBERON:0001893!1.59e-08!29;UBERON:0002020!1.16e-07!34;UBERON:0000955!6.74e-07!50;UBERON:0006238!6.74e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.73e-30,10;UBERON:0000411,4.73e-30,10;UBERON:0001950,4.73e-30,10;UBERON:0002619,7.87e-24,17;UBERON:0000956,3.53e-22,21;UBERON:0001869,3.53e-22,21;UBERON:0000203,3.53e-22,21;UBERON:0003528,2.05e-20,29;UBERON:0002791,2.05e-20,29;UBERON:0001893,2.05e-20,29;UBERON:0002020,6.43e-17,34;UBERON:0002780,2.19e-16,39;UBERON:0001890,2.19e-16,39;UBERON:0006240,2.19e-16,39;UBERON:0003080,6.90e-16,40;UBERON:0000955,7.34e-15,47;UBERON:0006238,7.34e-15,47;UBERON:0002616,2.39e-13,46;UBERON:0003056,2.59e-12,49;UBERON:0000073,2.67e-12,54;UBERON:0001049,2.13e-11,52;UBERON:0005068,2.13e-11,52;UBERON:0006241,2.13e-11,52;UBERON:0007135,2.13e-11,52;UBERON:0001017,2.50e-09,73;UBERON:0001016,5.63e-09,75;UBERON:0002346,1.32e-08,64;UBERON:0003075,1.32e-08,64;UBERON:0007284,1.32e-08,64;UBERON:0010371,4.03e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,3.3123527362615,5.07323404341233,2.12194825899015,1.9559956734746,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,6.37573903019398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,0,0.220868540951614,0.367472397644862,0.0958454710182364,1.83843757322004,0,0.766124028511126,1.0752457327937,0,0.365950574409639,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.10725460376606,0,0.346970653532272,0,0,0,0.470354828542819,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0.958520996047362,0,0.508280908292259,0.299581278809645,3.66000482254901,1.63350657746724,13.0368240144207,12.2743419518559,0.62336413367868,1.94689515681309,0.203678727700633,0.248813941220186,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0.702213187313235,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,1.68231958851302,0.617427674275707,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0.678980343100753,0.469380496577004,0.335012514883631,0.238043640886014,0,0.472905432318573,0,0,0.327726629431476,0,0,1.50791283939272,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0.430846795465598,0.955875191810208,0.222798674082394,0.566153061577665,0,0.292255857911312,0.395287777946524,5.78378369559253,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0.32977250588296,0.484393280087717,0.180938774784468,0,0,0,0.18542530201051,1.19609616558497,0,0.185194527369712,0.188368457004691,1.23024804948923,0.457556346413045,1.01987057996313,1.39951452323658,0.967399816630967,0,0,0.203319467126849,0,0,0,0,0.247960367176008,0,0,0,0,0.747582730219894,0,0.388902376688095,0,0.675824501963113,0.704143431874524,0.13020438484395,0.314578033277133,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0,0,0,41.7916363536629,41.8895965221531,40.6755814541972,44.1662678623277,21.2375581128899,30.9711497929777,29.0259675099676,24.7676661773321,19.938265995305,22.7814537170801,0.103787347584177,0,0.170733605754134,0,0.628839487883947,0.367687016900028,0.222246727801615,0,0.962757628775446,0.505394423527595,0.50695859978048,0.754505365544305,0.842773567228942,0.128050304809739,0.402048282689293,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0.953744759789284,0.290692833264657,0.282328141245992,0.507687647350059,0,0,0,1.12228454331548,0.474540072496697,0.197008964751127,1.22769312950907,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0.57386499620653,0,0.231867835620421 | |||
|short_description=p8@Mef2c | |||
}} |
Revision as of 08:55, 6 August 2015
Short description: | p8@Mef2c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Mef2c_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -390bp_to_uc007rif.1_5end |
EntrezGene: | 17260 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.73e-30 | 10 |
visual cortex | 4.73e-30 | 10 |
neocortex | 4.73e-30 | 10 |
regional part of cerebral cortex | 7.87e-24 | 17 |
cerebral cortex | 3.53e-22 | 21 |
cerebral hemisphere | 3.53e-22 | 21 |
pallium | 3.53e-22 | 21 |
brain grey matter | 2.05e-20 | 29 |
regional part of telencephalon | 2.05e-20 | 29 |
telencephalon | 2.05e-20 | 29 |
gray matter | 6.43e-17 | 34 |
regional part of forebrain | 2.19e-16 | 39 |
forebrain | 2.19e-16 | 39 |
future forebrain | 2.19e-16 | 39 |
anterior neural tube | 6.90e-16 | 40 |
brain | 7.34e-15 | 47 |
future brain | 7.34e-15 | 47 |
regional part of brain | 2.39e-13 | 46 |
pre-chordal neural plate | 2.59e-12 | 49 |
regional part of nervous system | 2.67e-12 | 54 |
neural tube | 2.13e-11 | 52 |
neural rod | 2.13e-11 | 52 |
future spinal cord | 2.13e-11 | 52 |
neural keel | 2.13e-11 | 52 |
central nervous system | 2.50e-09 | 73 |
nervous system | 5.63e-09 | 75 |
neurectoderm | 1.32e-08 | 64 |
neural plate | 1.32e-08 | 64 |
presumptive neural plate | 1.32e-08 | 64 |
ecto-epithelium | 4.03e-07 | 73 |