Personal tools

FFCP PHASE1:Mm9::chr19:23216132..23216157,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=16601|HGNC=|MCL_coexpression_id=2|UniProt=Q8CEC4|association_with_transcript=416bp_to_ENSMUST00000036884,NM_010638,uc008gzz.1_5end|description=CAGE_peak_3_at_Klf9_5end|id=chr19:23216132..23216157,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.04e-11!51;UBERON:0002021!5.59e-08!10;UBERON:0000411!5.59e-08!10;UBERON:0001950!5.59e-08!10;UBERON:0000955!7.08e-07!50;UBERON:0006238!7.08e-07!50;UBERON:0004111!8.42e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.18e-14,51;UBERON:0002021,2.65e-11,10;UBERON:0000411,2.65e-11,10;UBERON:0001950,2.65e-11,10;UBERON:0000955,1.00e-10,47;UBERON:0006238,1.00e-10,47;UBERON:0002616,5.61e-10,46;UBERON:0000073,1.46e-09,54;UBERON:0001049,1.10e-08,52;UBERON:0005068,1.10e-08,52;UBERON:0006241,1.10e-08,52;UBERON:0007135,1.10e-08,52;UBERON:0004111,1.35e-08,122;UBERON:0003080,2.89e-08,40;UBERON:0002780,1.25e-07,39;UBERON:0001890,1.25e-07,39;UBERON:0006240,1.25e-07,39;UBERON:0002619,1.96e-07,17;UBERON:0000025,2.61e-07,114;UBERON:0003528,3.56e-07,29;UBERON:0002791,3.56e-07,29;UBERON:0001893,3.56e-07,29;UBERON:0003056,5.91e-07,49;UBERON:0002346,8.67e-07,64;UBERON:0003075,8.67e-07,64;UBERON:0007284,8.67e-07,64|phase1_expression=0.80074423552397,1.74487703819681,2.27499619694768,3.0246421130683,1.50268718983904,0.671517087647559,0.467225281191051,0.645616617207881,0.703943610758334,0.70219357896598,0.68487187290202,0,0,0,0,0,0,0,0,0,2.89147186513637,0.198581902401771,0,0.799962113967033,0.91763712426868,1.14846392823004,0.430761996159075,1.29282739611533,1.52018735565099,0.504060259519861,0.221730510655305,0,0,0,0,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0.881277725829041,1.01376931219515,0.550640256485045,0.782391344348039,0,0.219686182734472,1.1665793944457,0,1.43752564364972,0,0,0,1.54355661621568,2.29226751951005,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0.856952953211411,0.883474163806454,0,0,0,1.10115880999389,7.53355294702608,5.06901559745603,0,0,0.52091337055676,3.62937898701795,2.25105044012672,2.75036845998258,0,0,0.186399445825301,0.605809546665472,1.20914496170857,1.44932244350839,0,0.679971333707751,1.07940638327563,3.89865850468601,1.34408066129201,2.10666630197628,1.36344258062446,0.519572009205738,0.35333957451034,0.704217098883403,1.28326477414318,0,0,0.649473123033642,1.01343946190039,0.505524445014783,1.7127581957859,0.258937883647172,1.33597925158342,0.346970653532272,0,0.461230994512117,0.301445281105245,1.17588707135705,1.13099932196708,1.73036477414062,4.33798070759735,0,0.485300549842228,0.883366073841574,0.484875253135222,0,9.36898550436951,6.91174132484402,0.510914110417183,0.11981512450592,0.599902730993408,0.381210681219194,7.9389038884556,17.3850229071078,0.376963056338593,17.2086076990354,15.0872119824895,8.93488591606108,8.76102820565891,1.93494791315601,0.870848794270651,1.51633655060205,2.52530227063769,0.130120442962704,0,0.180062129805349,0.150704817835715,0.816437989815934,0.384341160854549,0.281105173679186,5.43277078551933,0,0.378212160335639,0,0,0,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0.414251545071004,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.700592054203017,0.658239399653922,0.985004784474571,1.21603214318784,2.19299981137998,1.3173006917463,0.805238512562231,10.7247873767705,0.823236899034275,1.32167513193519,0.793351699990633,0,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,1.42358718463353,0.658795818896044,0.754005626400808,0.994782360205754,1.9496408711912,0.898819408654221,0.216138049874694,1.1948476395262,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,1.33258057791605,0.569128834118316,2.36176236767363,0.784993639206874,0.863780147452604,1.48226313543574,0,0,0,0,0,0.25462585178142,0.863088412352432,1.29708181420028,0,0,0.744281895337007,0.936113019343682,1.76805214562978,0.538192240565737,0.964887042726734,1.47802552133284,0.189491411770485,0,0.169745085775188,0.234690248288502,1.00503754465089,2.14239276797412,1.56106918286239,0.788175720530955,1.55025282754142,0.478364305972461,0.81931657357869,0.863424909329478,1.15719246865209,1.50791283939272,0.54390568381871,0.983528546038072,1.37968373152366,4.49541651965817,2.46144541843627,0.819674726883377,2.7771801992481,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0.849229592366497,0.809621403349789,0.876767573733936,0,15.1021018718249,1.27746076687442,0.178065603667255,1.79175655288934,1.48473110675282,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0.775284879504663,1.45413491791002,0,1.26414703174326,1.05418608574999,2.06271086496374,1.70219802876894,0,0.129358683782755,0,1.06404140185364,0.356737635204141,1.81003922662333,0.913394847343798,1.17335854031855,2.1183207086382,1.54369878638473,1.81374878235628,0.322928853391811,0.482503399425247,0.358117032009409,0.164140899745061,0.874442509889552,5.19190845629427,0.170870880797853,0,0.740778109478847,0,0.27338845544205,0.457556346413045,0.509935289981566,0.559805809294632,0.552799895217695,0,0,0.609958401380546,0.324016022465404,0.209088296014469,0,0.539457385539283,0.661227645802687,1.04702376793612,0.90730481304255,1.86401793926078,9.58277995763124,0,0,0,0,0.168956125490778,0.469428954583016,0,0.943734099831398,1.20792060413003,2.30424005006292,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0.15241361331,0.100826185136841,0.584747284438515,0,0.116876902181569,1.81384306892169,1.77588762699252,1.25599399253266,0.839423081820392,1.35232715822533,1.12609485270709,0.915758121336325,0.643105137237198,2.50786052017682,7.34177395402186,9.66682996665071,8.59343270159095,10.3111909406213,16.4419804744954,12.8416962556249,14.1754725048679,16.2115633160719,16.3131267234314,14.497288729051,0,0,0,0,0,0.183843508450014,0.44449345560323,0.824140228955577,0.64183841918363,0.252697211763798,0.50695859978048,1.13175804831646,0.468207537349412,0.704276676453562,0.574354689556133,0.952587382566147,0.231768651889711,0.964546102318525,0.412085900803307,0.588795680537589,0.685738504770831,0.177475806159338,0.476872379894642,0.726732083161643,0.658765662907314,0.507687647350059,0.548783918618318,1.31534855718921,0.407412341537585,0,0.474540072496697,0.197008964751127,1.63692417267876,0.464810523557898,0.578719832943424,0,0.701794825336225,1.07435527024149,3.25190164517034,0.441182838239031,0.927471342481686|short_description=p3@Klf9}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16601
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=uniprot:Q8CEC4
|association_with_transcript=416bp_to_ENSMUST00000036884,NM_010638,uc008gzz.1_5end
|cluster_id=chr19:23216132..23216157,+
|description=CAGE_peak_3_at_Klf9_5end
|id=chr19:23216132..23216157,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!2.04e-11!51;UBERON:0002021!5.59e-08!10;UBERON:0000411!5.59e-08!10;UBERON:0001950!5.59e-08!10;UBERON:0000955!7.08e-07!50;UBERON:0006238!7.08e-07!50;UBERON:0004111!8.42e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.18e-14,51;UBERON:0002021,2.65e-11,10;UBERON:0000411,2.65e-11,10;UBERON:0001950,2.65e-11,10;UBERON:0000955,1.00e-10,47;UBERON:0006238,1.00e-10,47;UBERON:0002616,5.61e-10,46;UBERON:0000073,1.46e-09,54;UBERON:0001049,1.10e-08,52;UBERON:0005068,1.10e-08,52;UBERON:0006241,1.10e-08,52;UBERON:0007135,1.10e-08,52;UBERON:0004111,1.35e-08,122;UBERON:0003080,2.89e-08,40;UBERON:0002780,1.25e-07,39;UBERON:0001890,1.25e-07,39;UBERON:0006240,1.25e-07,39;UBERON:0002619,1.96e-07,17;UBERON:0000025,2.61e-07,114;UBERON:0003528,3.56e-07,29;UBERON:0002791,3.56e-07,29;UBERON:0001893,3.56e-07,29;UBERON:0003056,5.91e-07,49;UBERON:0002346,8.67e-07,64;UBERON:0003075,8.67e-07,64;UBERON:0007284,8.67e-07,64
|phase1_expression=0.80074423552397,1.74487703819681,2.27499619694768,3.0246421130683,1.50268718983904,0.671517087647559,0.467225281191051,0.645616617207881,0.703943610758334,0.70219357896598,0.68487187290202,0,0,0,0,0,0,0,0,0,2.89147186513637,0.198581902401771,0,0.799962113967033,0.91763712426868,1.14846392823004,0.430761996159075,1.29282739611533,1.52018735565099,0.504060259519861,0.221730510655305,0,0,0,0,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0.881277725829041,1.01376931219515,0.550640256485045,0.782391344348039,0,0.219686182734472,1.1665793944457,0,1.43752564364972,0,0,0,1.54355661621568,2.29226751951005,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0.856952953211411,0.883474163806454,0,0,0,1.10115880999389,7.53355294702608,5.06901559745603,0,0,0.52091337055676,3.62937898701795,2.25105044012672,2.75036845998258,0,0,0.186399445825301,0.605809546665472,1.20914496170857,1.44932244350839,0,0.679971333707751,1.07940638327563,3.89865850468601,1.34408066129201,2.10666630197628,1.36344258062446,0.519572009205738,0.35333957451034,0.704217098883403,1.28326477414318,0,0,0.649473123033642,1.01343946190039,0.505524445014783,1.7127581957859,0.258937883647172,1.33597925158342,0.346970653532272,0,0.461230994512117,0.301445281105245,1.17588707135705,1.13099932196708,1.73036477414062,4.33798070759735,0,0.485300549842228,0.883366073841574,0.484875253135222,0,9.36898550436951,6.91174132484402,0.510914110417183,0.11981512450592,0.599902730993408,0.381210681219194,7.9389038884556,17.3850229071078,0.376963056338593,17.2086076990354,15.0872119824895,8.93488591606108,8.76102820565891,1.93494791315601,0.870848794270651,1.51633655060205,2.52530227063769,0.130120442962704,0,0.180062129805349,0.150704817835715,0.816437989815934,0.384341160854549,0.281105173679186,5.43277078551933,0,0.378212160335639,0,0,0,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0.414251545071004,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.700592054203017,0.658239399653922,0.985004784474571,1.21603214318784,2.19299981137998,1.3173006917463,0.805238512562231,10.7247873767705,0.823236899034275,1.32167513193519,0.793351699990633,0,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,1.42358718463353,0.658795818896044,0.754005626400808,0.994782360205754,1.9496408711912,0.898819408654221,0.216138049874694,1.1948476395262,0.189667900953082,0.114248512609729,0,0.203651327845314,0.387904974335251,1.33258057791605,0.569128834118316,2.36176236767363,0.784993639206874,0.863780147452604,1.48226313543574,0,0,0,0,0,0.25462585178142,0.863088412352432,1.29708181420028,0,0,0.744281895337007,0.936113019343682,1.76805214562978,0.538192240565737,0.964887042726734,1.47802552133284,0.189491411770485,0,0.169745085775188,0.234690248288502,1.00503754465089,2.14239276797412,1.56106918286239,0.788175720530955,1.55025282754142,0.478364305972461,0.81931657357869,0.863424909329478,1.15719246865209,1.50791283939272,0.54390568381871,0.983528546038072,1.37968373152366,4.49541651965817,2.46144541843627,0.819674726883377,2.7771801992481,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0.849229592366497,0.809621403349789,0.876767573733936,0,15.1021018718249,1.27746076687442,0.178065603667255,1.79175655288934,1.48473110675282,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0.775284879504663,1.45413491791002,0,1.26414703174326,1.05418608574999,2.06271086496374,1.70219802876894,0,0.129358683782755,0,1.06404140185364,0.356737635204141,1.81003922662333,0.913394847343798,1.17335854031855,2.1183207086382,1.54369878638473,1.81374878235628,0.322928853391811,0.482503399425247,0.358117032009409,0.164140899745061,0.874442509889552,5.19190845629427,0.170870880797853,0,0.740778109478847,0,0.27338845544205,0.457556346413045,0.509935289981566,0.559805809294632,0.552799895217695,0,0,0.609958401380546,0.324016022465404,0.209088296014469,0,0.539457385539283,0.661227645802687,1.04702376793612,0.90730481304255,1.86401793926078,9.58277995763124,0,0,0,0,0.168956125490778,0.469428954583016,0,0.943734099831398,1.20792060413003,2.30424005006292,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0.15241361331,0.100826185136841,0.584747284438515,0,0.116876902181569,1.81384306892169,1.77588762699252,1.25599399253266,0.839423081820392,1.35232715822533,1.12609485270709,0.915758121336325,0.643105137237198,2.50786052017682,7.34177395402186,9.66682996665071,8.59343270159095,10.3111909406213,16.4419804744954,12.8416962556249,14.1754725048679,16.2115633160719,16.3131267234314,14.497288729051,0,0,0,0,0,0.183843508450014,0.44449345560323,0.824140228955577,0.64183841918363,0.252697211763798,0.50695859978048,1.13175804831646,0.468207537349412,0.704276676453562,0.574354689556133,0.952587382566147,0.231768651889711,0.964546102318525,0.412085900803307,0.588795680537589,0.685738504770831,0.177475806159338,0.476872379894642,0.726732083161643,0.658765662907314,0.507687647350059,0.548783918618318,1.31534855718921,0.407412341537585,0,0.474540072496697,0.197008964751127,1.63692417267876,0.464810523557898,0.578719832943424,0,0.701794825336225,1.07435527024149,3.25190164517034,0.441182838239031,0.927471342481686
|short_description=p3@Klf9
}}

Revision as of 10:01, 6 August 2015

Short description:p3@Klf9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Klf9_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 416bp_to_ENSMUST00000036884, NM_010638, uc008gzz.1_5end
EntrezGene:16601
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Klf9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A47.94
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D517.21
cortex, neonate N30.CNhs11107.1392-42F215.09
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E810.72
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I915.10
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism3.18e-1451
occipital lobe2.65e-1110
visual cortex2.65e-1110
neocortex2.65e-1110
brain1.00e-1047
future brain1.00e-1047
regional part of brain5.61e-1046
regional part of nervous system1.46e-0954
neural tube1.10e-0852
neural rod1.10e-0852
future spinal cord1.10e-0852
neural keel1.10e-0852
anatomical conduit1.35e-08122
anterior neural tube2.89e-0840
regional part of forebrain1.25e-0739
forebrain1.25e-0739
future forebrain1.25e-0739
regional part of cerebral cortex1.96e-0717
tube2.61e-07114
brain grey matter3.56e-0729
regional part of telencephalon3.56e-0729
telencephalon3.56e-0729
pre-chordal neural plate5.91e-0749
neurectoderm8.67e-0764
neural plate8.67e-0764
presumptive neural plate8.67e-0764
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:23216132..23216157,%2B&oldid=4007664"