FFCP PHASE2:Hg19::chr19:13136130..13136165,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4784 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7788 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7788 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q13051 | ||
|association_with_transcript=0bp_to_U18760_5end | |association_with_transcript=0bp_to_U18760_5end | ||
|cluster_id=chr19:13136130..13136165,+ | |cluster_id=chr19:13136130..13136165,+ |
Latest revision as of 23:23, 15 September 2015
Short description: | p6@NFIX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NFIX_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_U18760_5end |
EntrezGene: | NFIX |
HGNC: | 7788 |
UniProt: | Q13051 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@NFIX |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.08e-13 | 76 |
muscle precursor cell | 3.72e-10 | 58 |
myoblast | 3.72e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.72e-10 | 58 |
electrically responsive cell | 4.35e-09 | 61 |
electrically active cell | 4.35e-09 | 61 |
muscle cell | 7.09e-09 | 55 |
smooth muscle cell | 3.27e-08 | 43 |
smooth muscle myoblast | 3.27e-08 | 43 |
vascular associated smooth muscle cell | 8.79e-08 | 32 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 2.10e-25 | 56 |
neural rod | 2.10e-25 | 56 |
future spinal cord | 2.10e-25 | 56 |
neural keel | 2.10e-25 | 56 |
regional part of nervous system | 2.63e-25 | 53 |
regional part of brain | 2.63e-25 | 53 |
central nervous system | 2.61e-22 | 81 |
structure with developmental contribution from neural crest | 5.54e-22 | 132 |
neural plate | 3.46e-21 | 82 |
presumptive neural plate | 3.46e-21 | 82 |
Showing 1 to 10 of 87 entries