FFCP PHASE2:Hg19::chr4:109086403..109086421,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:51176 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6551 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6551 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 14:44, 24 September 2015
| Short description: | p19@LEF1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_19_at_LEF1_5end |
| Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
| Association with transcript: | 0bp_to_ENST00000510135, ENST00000510717, uc011cfj.1_5end |
| EntrezGene: | LEF1 |
| HGNC: | 6551 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p19@LEF1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| T cell | 5.87e-27 | 25 |
| pro-T cell | 5.87e-27 | 25 |
| mature alpha-beta T cell | 3.01e-24 | 18 |
| alpha-beta T cell | 3.01e-24 | 18 |
| immature T cell | 3.01e-24 | 18 |
| mature T cell | 3.01e-24 | 18 |
| immature alpha-beta T cell | 3.01e-24 | 18 |
| CD4-positive, alpha-beta T cell | 1.77e-19 | 6 |
| regulatory T cell | 5.56e-16 | 2 |
| CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.56e-16 | 2 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| thymus | 1.53e-08 | 4 |
| hemolymphoid system gland | 1.53e-08 | 4 |
| thymic region | 1.53e-08 | 4 |
| pharyngeal gland | 1.53e-08 | 4 |
| thymus primordium | 1.53e-08 | 4 |
| blood | 1.17e-07 | 15 |
| haemolymphatic fluid | 1.17e-07 | 15 |
| organism substance | 1.17e-07 | 15 |
Showing 1 to 8 of 8 entries
