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{{Coexpression_clusters
{{Coexpression_clusters
|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789417179573912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|full_id=C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel
|full_id=C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel
|gostat_on_coexpression_clusters=GO:0042605!peptide antigen binding!0.0159874021678765!6976;6955$GO:0042287!MHC protein binding!0.0159874021678765!6976;6955$GO:0007585!respiratory gaseous exchange!0.0170655740479378!30012;1080$GO:0001764!neuron migration!0.0198090540169359!30012;1080$GO:0005224!ATP-binding and phosphorylation-dependent chloride channel activity!0.0331729983401609!1080$GO:0005260!channel-conductance-controlling ATPase activity!0.0331729983401609!1080$GO:0006955!immune response!0.0331729983401609!6976;913;910;51744;51561$GO:0006968!cellular defense response!0.0396488492130839!51744;6955
|gostat_on_coexpression_clusters=GO:0042605!peptide antigen binding!0.0159874021678765!6976;6955$GO:0042287!MHC protein binding!0.0159874021678765!6976;6955$GO:0007585!respiratory gaseous exchange!0.0170655740479378!30012;1080$GO:0001764!neuron migration!0.0198090540169359!30012;1080$GO:0005224!ATP-binding and phosphorylation-dependent chloride channel activity!0.0331729983401609!1080$GO:0005260!channel-conductance-controlling ATPase activity!0.0331729983401609!1080$GO:0006955!immune response!0.0331729983401609!6976;913;910;51744;51561$GO:0006968!cellular defense response!0.0396488492130839!51744;6955

Revision as of 17:49, 12 September 2012


Full id: C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel



Phase1 CAGE Peaks

Hg19::chr10:128935860..128935868,+p3@BC152483
p3@BC152484
Hg19::chr10:128935881..128935890,+p4@BC152483
p4@BC152484
Hg19::chr10:128936005..128936009,+p5@BC152483
p5@BC152484
Hg19::chr10:128936021..128936049,+p1@BC152483
p1@BC152484
Hg19::chr10:128936051..128936062,+p2@BC152483
p2@BC152484
Hg19::chr10:129136223..129136235,+p@chr10:129136223..129136235
+
Hg19::chr10:129136238..129136254,+p@chr10:129136238..129136254
+
Hg19::chr10:129136274..129136285,+p@chr10:129136274..129136285
+
Hg19::chr10:129136821..129136824,+p@chr10:129136821..129136824
+
Hg19::chr10:292574..292612,+p@chr10:292574..292612
+
Hg19::chr10:73638214..73638223,-p@chr10:73638214..73638223
-
Hg19::chr10:73638280..73638322,-p@chr10:73638280..73638322
-
Hg19::chr11:112170529..112170557,+p@chr11:112170529..112170557
+
Hg19::chr11:114757673..114757682,-p@chr11:114757673..114757682
-
Hg19::chr11:114757712..114757717,-p@chr11:114757712..114757717
-
Hg19::chr11:115262470..115262485,-p@chr11:115262470..115262485
-
Hg19::chr11:115262496..115262505,-p@chr11:115262496..115262505
-
Hg19::chr11:134597294..134597304,-p@chr11:134597294..134597304
-
Hg19::chr11:32614011..32614012,+p@chr11:32614011..32614012
+
Hg19::chr11:93141281..93141291,+p@chr11:93141281..93141291
+
Hg19::chr12:103887303..103887334,-p@chr12:103887303..103887334
-
Hg19::chr12:3834599..3834613,-p@chr12:3834599..3834613
-
Hg19::chr12:46601061..46601068,-p65@SLC38A1
Hg19::chr12:46601088..46601093,-p67@SLC38A1
Hg19::chr12:46601114..46601120,-p69@SLC38A1
Hg19::chr12:46601131..46601142,-p45@SLC38A1
Hg19::chr13:105493679..105493695,-p@chr13:105493679..105493695
-
Hg19::chr13:105493716..105493723,-p@chr13:105493716..105493723
-
Hg19::chr13:49220471..49220482,+p@chr13:49220471..49220482
+
Hg19::chr13:51381867..51381876,+p4@uc001vey.2
Hg19::chr13:51382635..51382643,+p@chr13:51382635..51382643
+
Hg19::chr13:67588658..67588680,-p@chr13:67588658..67588680
-
Hg19::chr13:67621642..67621674,-p@chr13:67621642..67621674
-
Hg19::chr14:100541182..100541217,-p1@ENST00000554245
Hg19::chr14:22217327..22217347,+p3@uc010aiq.1
p3@uc010tmf.1
Hg19::chr14:22217349..22217370,+p1@uc010aiq.1
p1@uc010tmf.1
Hg19::chr14:22217386..22217400,+p4@uc010aiq.1
p4@uc010tmf.1
Hg19::chr14:22217405..22217431,+p2@uc010aiq.1
p2@uc010tmf.1
Hg19::chr14:22217432..22217439,+p2@TRAV5
Hg19::chr14:22217447..22217456,+p1@TRAV5
Hg19::chr14:22217797..22217804,+p1@U39105
Hg19::chr14:22217929..22217946,+p1@Z22965
Hg19::chr14:22443352..22443373,+p@chr14:22443352..22443373
+
Hg19::chr14:22443396..22443407,+p@chr14:22443396..22443407
+
Hg19::chr14:22471301..22471322,+p2@TRAV18
Hg19::chr14:22471348..22471353,+p4@TRAV18
Hg19::chr14:22475742..22475766,+p1@TRAV19
Hg19::chr14:22475767..22475787,+p1@uc001wcu.3
Hg19::chr14:22476333..22476338,+p2@AF326716
Hg19::chr14:23012123..23012165,+p1@uc001wgk.2
Hg19::chr14:23017196..23017207,+p@chr14:23017196..23017207
+
Hg19::chr14:23017215..23017233,+p@chr14:23017215..23017233
+
Hg19::chr14:23017300..23017308,+p@chr14:23017300..23017308
+
Hg19::chr14:23017430..23017460,+p@chr14:23017430..23017460
+
Hg19::chr14:54235834..54235839,-p@chr14:54235834..54235839
-
Hg19::chr14:54235844..54235851,-p@chr14:54235844..54235851
-
Hg19::chr14:54235896..54235906,-p@chr14:54235896..54235906
-
Hg19::chr14:98185602..98185614,-p@chr14:98185602..98185614
-
Hg19::chr14:98185616..98185624,-p@chr14:98185616..98185624
-
Hg19::chr14:98185629..98185632,-p@chr14:98185629..98185632
-
Hg19::chr14:98552886..98552912,-p@chr14:98552886..98552912
-
Hg19::chr14:98558220..98558222,-p@chr14:98558220..98558222
-
Hg19::chr14:98582132..98582135,-p@chr14:98582132..98582135
-
Hg19::chr14:98597420..98597421,-p@chr14:98597420..98597421
-
Hg19::chr14:98632482..98632507,-p@chr14:98632482..98632507
-
Hg19::chr15:100879255..100879268,-p5@ADAMTS17
Hg19::chr15:100879271..100879278,-p8@ADAMTS17
Hg19::chr15:23746846..23746852,+p@chr15:23746846..23746852
+
Hg19::chr15:23749113..23749125,+p@chr15:23749113..23749125
+
Hg19::chr15:23749134..23749145,+p@chr15:23749134..23749145
+
Hg19::chr15:23749181..23749192,+p@chr15:23749181..23749192
+
Hg19::chr15:23749235..23749256,+p@chr15:23749235..23749256
+
Hg19::chr15:23749299..23749326,+p@chr15:23749299..23749326
+
Hg19::chr15:23763898..23763901,+p@chr15:23763898..23763901
+
Hg19::chr15:23765572..23765574,+p@chr15:23765572..23765574
+
Hg19::chr15:23770128..23770131,+p@chr15:23770128..23770131
+
Hg19::chr15:23811479..23811497,+p@chr15:23811479..23811497
+
Hg19::chr15:23811505..23811523,+p@chr15:23811505..23811523
+
Hg19::chr15:23811537..23811553,+p@chr15:23811537..23811553
+
Hg19::chr15:23811691..23811700,+p@chr15:23811691..23811700
+
Hg19::chr15:23814475..23814483,-p@chr15:23814475..23814483
-
Hg19::chr15:92069837..92069858,+p@chr15:92069837..92069858
+
Hg19::chr15:99551018..99551022,-p1@PGPEP1L
Hg19::chr16:12599618..12599620,-p@chr16:12599618..12599620
-
Hg19::chr16:12662158..12662161,-p@chr16:12662158..12662161
-
Hg19::chr16:12678256..12678261,-p@chr16:12678256..12678261
-
Hg19::chr16:12680919..12680923,-p@chr16:12680919..12680923
-
Hg19::chr16:12684870..12684876,-p@chr16:12684870..12684876
-
Hg19::chr16:12700714..12700723,-p@chr16:12700714..12700723
-
Hg19::chr16:12713150..12713164,-p@chr16:12713150..12713164
-
Hg19::chr16:12713598..12713613,-p@chr16:12713598..12713613
-
Hg19::chr16:63070860..63070875,+p@chr16:63070860..63070875
+
Hg19::chr16:63074020..63074025,+p@chr16:63074020..63074025
+
Hg19::chr16:68402140..68402168,-p@chr16:68402140..68402168
-
Hg19::chr16:70726869..70726883,-p@chr16:70726869..70726883
-
Hg19::chr16:72258240..72258247,-p@chr16:72258240..72258247
-
Hg19::chr16:72258248..72258258,-p@chr16:72258248..72258258
-
Hg19::chr17:54876375..54876389,-p@chr17:54876375..54876389
-
Hg19::chr17:66342972..66342979,+p2@AK298668
Hg19::chr17:67997853..67997859,+p@chr17:67997853..67997859
+
Hg19::chr18:10322232..10322239,-p@chr18:10322232..10322239
-
Hg19::chr18:10322262..10322265,-p@chr18:10322262..10322265
-
Hg19::chr18:10322282..10322296,-p@chr18:10322282..10322296
-
Hg19::chr18:10322301..10322307,-p@chr18:10322301..10322307
-
Hg19::chr18:12763760..12763764,-p@chr18:12763760..12763764
-
Hg19::chr18:12776132..12776137,-p1@BC065363
Hg19::chr18:683448..683456,-p@chr18:683448..683456
-
Hg19::chr18:76433212..76433221,+p@chr18:76433212..76433221
+
Hg19::chr18:76433242..76433250,+p@chr18:76433242..76433250
+
Hg19::chr18:76438175..76438184,-p@chr18:76438175..76438184
-
Hg19::chr18:76438197..76438205,-p@chr18:76438197..76438205
-
Hg19::chr18:76438317..76438324,-p@chr18:76438317..76438324
-
Hg19::chr18:76694029..76694036,-p@chr18:76694029..76694036
-
Hg19::chr18:76694066..76694072,-p@chr18:76694066..76694072
-
Hg19::chr18:76694733..76694740,-p@chr18:76694733..76694740
-
Hg19::chr18:76694749..76694754,-p@chr18:76694749..76694754
-
Hg19::chr18:76694765..76694776,-p@chr18:76694765..76694776
-
Hg19::chr18:76694782..76694794,-p@chr18:76694782..76694794
-
Hg19::chr18:76694797..76694808,-p@chr18:76694797..76694808
-
Hg19::chr18:76699951..76699988,-p@chr18:76699951..76699988
-
Hg19::chr19:47998825..47998895,-p@chr19:47998825..47998895
-
Hg19::chr1:1078352..1078360,-p@chr1:1078352..1078360
-
Hg19::chr1:116213626..116213637,+p5@VANGL1
Hg19::chr1:116213646..116213662,+p4@VANGL1
Hg19::chr1:116213713..116213720,+p10@VANGL1
Hg19::chr1:116213741..116213752,+p9@VANGL1
Hg19::chr1:154720589..154720602,-p@chr1:154720589..154720602
-
Hg19::chr1:156933227..156933271,-p@chr1:156933227..156933271
-
Hg19::chr1:158301000..158301009,-p14@CD1B
Hg19::chr1:158301019..158301040,-p7@CD1B
Hg19::chr1:158301762..158301767,-p16@CD1B
Hg19::chr1:158301806..158301818,-p15@CD1B
Hg19::chr1:158322941..158322963,+p20@CD1E
Hg19::chr1:158323055..158323063,+p28@CD1E
Hg19::chr1:158323158..158323175,+p13@CD1E
Hg19::chr1:158323183..158323188,+p21@CD1E
Hg19::chr1:158323215..158323229,+p18@CD1E
Hg19::chr1:158323244..158323269,+p3@CD1E
Hg19::chr1:158323271..158323294,+p7@CD1E
Hg19::chr1:158323296..158323301,+p17@CD1E
Hg19::chr1:158323304..158323324,+p9@CD1E
Hg19::chr1:158323344..158323347,+p35@CD1E
Hg19::chr1:158323376..158323381,+p24@CD1E
Hg19::chr1:158323491..158323497,+p25@CD1E
Hg19::chr1:160808812..160808826,-p7@CD244
Hg19::chr1:160808905..160808910,-p11@CD244
Hg19::chr1:16477916..16477925,-p@chr1:16477916..16477925
-
Hg19::chr1:208252658..208252675,-p@chr1:208252658..208252675
-
Hg19::chr1:213541658..213541671,+p@chr1:213541658..213541671
+
Hg19::chr1:223374979..223375023,+p@chr1:223374979..223375023
+
Hg19::chr1:223403556..223403561,-p@chr1:223403556..223403561
-
Hg19::chr1:223537283..223537286,-p6@SUSD4
Hg19::chr1:229290455..229290475,-p@chr1:229290455..229290475
-
Hg19::chr1:27953149..27953152,-p18@FGR
Hg19::chr1:39794062..39794114,+p14@MACF1
Hg19::chr1:62751972..62751982,-p@chr1:62751972..62751982
-
Hg19::chr1:62751988..62751993,-p@chr1:62751988..62751993
-
Hg19::chr1:62752000..62752009,-p@chr1:62752000..62752009
-
Hg19::chr1:62752366..62752399,-p@chr1:62752366..62752399
-
Hg19::chr1:62752796..62752803,-p@chr1:62752796..62752803
-
Hg19::chr1:62752840..62752853,-p@chr1:62752840..62752853
-
Hg19::chr1:62752965..62752973,-p@chr1:62752965..62752973
-
Hg19::chr1:62753005..62753022,-p@chr1:62753005..62753022
-
Hg19::chr1:62753026..62753036,-p@chr1:62753026..62753036
-
Hg19::chr1:62753080..62753090,-p@chr1:62753080..62753090
-
Hg19::chr1:62753095..62753101,-p@chr1:62753095..62753101
-
Hg19::chr1:62753200..62753205,-p@chr1:62753200..62753205
-
Hg19::chr20:42574261..42574270,+p14@TOX2
Hg19::chr20:42574317..42574328,+p12@TOX2
Hg19::chr20:43302648..43302652,-p@chr20:43302648..43302652
-
Hg19::chr20:43947701..43947735,-p@chr20:43947701..43947735
-
Hg19::chr20:56233042..56233052,+p@chr20:56233042..56233052
+
Hg19::chr20:56233080..56233085,+p@chr20:56233080..56233085
+
Hg19::chr20:56234638..56234653,-p@chr20:56234638..56234653
-
Hg19::chr20:56234717..56234758,-p@chr20:56234717..56234758
-
Hg19::chr20:56512403..56512431,+p@chr20:56512403..56512431
+
Hg19::chr20:56513778..56513804,-p@chr20:56513778..56513804
-
Hg19::chr20:56747231..56747236,-p@chr20:56747231..56747236
-
Hg19::chr20:56747253..56747266,-p@chr20:56747253..56747266
-
Hg19::chr20:56747268..56747273,-p@chr20:56747268..56747273
-
Hg19::chr20:61639397..61639409,+p@chr20:61639397..61639409
+
Hg19::chr20:61915536..61915555,-p@chr20:61915536..61915555
-
Hg19::chr21:40262840..40262846,-p@chr21:40262840..40262846
-
Hg19::chr21:40296492..40296522,+p@chr21:40296492..40296522
+
Hg19::chr21:46993733..46993745,-p@chr21:46993733..46993745
-
Hg19::chr21:46993783..46993791,-p@chr21:46993783..46993791
-
Hg19::chr21:46994123..46994132,-p@chr21:46994123..46994132
-
Hg19::chr21:46994152..46994163,-p@chr21:46994152..46994163
-
Hg19::chr21:46994182..46994193,-p@chr21:46994182..46994193
-
Hg19::chr22:42780663..42780702,-p1@AB489188
Hg19::chr22:47853981..47853989,+p@chr22:47853981..47853989
+
Hg19::chr22:49994693..49994722,-p@chr22:49994693..49994722
-
Hg19::chr2:112385033..112385044,-p@chr2:112385033..112385044
-
Hg19::chr2:112460023..112460033,+p@chr2:112460023..112460033
+
Hg19::chr2:112463407..112463420,-p@chr2:112463407..112463420
-
Hg19::chr2:112463437..112463455,-p@chr2:112463437..112463455
-
Hg19::chr2:112466038..112466067,-p@chr2:112466038..112466067
-
Hg19::chr2:112466098..112466104,-p@chr2:112466098..112466104
-
Hg19::chr2:112466116..112466123,-p@chr2:112466116..112466123
-
Hg19::chr2:136577820..136577843,+p2@LOC100507600
Hg19::chr2:136577861..136577876,+p1@LOC100507600
Hg19::chr2:213405613..213405619,-p@chr2:213405613..213405619
-
Hg19::chr2:220478444..220478454,+p6@STK11IP
Hg19::chr2:220478459..220478466,+p10@STK11IP
Hg19::chr2:98341540..98341544,+p@chr2:98341540..98341544
+
Hg19::chr2:98341570..98341580,+p@chr2:98341570..98341580
+
Hg19::chr2:98341597..98341614,+p@chr2:98341597..98341614
+
Hg19::chr3:133209792..133209807,-p4@AK128281
Hg19::chr3:133209865..133209876,-p3@AK128281
Hg19::chr3:18058090..18058098,+p@chr3:18058090..18058098
+
Hg19::chr3:195869677..195869694,+p1@uc011btt.1
Hg19::chr3:45957088..45957099,-p3@LZTFL1
Hg19::chr4:136809271..136809276,-p1@ENST00000504365
Hg19::chr4:151246994..151247003,-p@chr4:151246994..151247003
-
Hg19::chr4:151247006..151247026,-p@chr4:151247006..151247026
-
Hg19::chr4:169433223..169433234,+p@chr4:169433223..169433234
+
Hg19::chr4:187518318..187518321,-p53@FAT1
Hg19::chr4:187518341..187518353,-p23@FAT1
Hg19::chr4:187518373..187518386,-p17@FAT1
Hg19::chr4:187518389..187518415,-p6@FAT1
Hg19::chr4:187518454..187518463,-p42@FAT1
Hg19::chr4:187519913..187519927,-p49@FAT1
Hg19::chr4:187519949..187519954,-p57@FAT1
Hg19::chr4:187520011..187520021,-p55@FAT1
Hg19::chr4:187520022..187520033,-p46@FAT1
Hg19::chr4:187524184..187524218,-p@chr4:187524184..187524218
-
Hg19::chr4:187524311..187524339,+p@chr4:187524311..187524339
+
Hg19::chr4:187525346..187525358,-p@chr4:187525346..187525358
-
Hg19::chr4:187549370..187549410,-p@chr4:187549370..187549410
-
Hg19::chr4:187555917..187555924,-p@chr4:187555917..187555924
-
Hg19::chr4:187556003..187556008,-p@chr4:187556003..187556008
-
Hg19::chr4:8231056..8231071,+p@chr4:8231056..8231071
+
Hg19::chr4:8231295..8231305,+p@chr4:8231295..8231305
+
Hg19::chr4:8231597..8231598,+p@chr4:8231597..8231598
+
Hg19::chr4:8237045..8237052,+p@chr4:8237045..8237052
+
Hg19::chr4:8237151..8237165,+p@chr4:8237151..8237165
+
Hg19::chr4:8237859..8237898,+p@chr4:8237859..8237898
+
Hg19::chr4:8238051..8238066,+p@chr4:8238051..8238066
+
Hg19::chr4:8238072..8238081,+p@chr4:8238072..8238081
+
Hg19::chr4:8238101..8238108,+p@chr4:8238101..8238108
+
Hg19::chr5:1319245..1319263,+p@chr5:1319245..1319263
+
Hg19::chr5:133434873..133434880,-p@chr5:133434873..133434880
-
Hg19::chr5:133434881..133434886,-p@chr5:133434881..133434886
-
Hg19::chr5:170736075..170736095,-p2@ENST00000528269
Hg19::chr5:170736216..170736238,+p2@TLX3
Hg19::chr5:170736243..170736279,+p1@TLX3
Hg19::chr5:170737544..170737590,+p@chr5:170737544..170737590
+
Hg19::chr5:4420527..4420531,-p@chr5:4420527..4420531
-
Hg19::chr5:964466..964498,+p@chr5:964466..964498
+
Hg19::chr6:14783362..14783368,-p@chr6:14783362..14783368
-
Hg19::chr6:150311074..150311087,+p@chr6:150311074..150311087
+
Hg19::chr6:2900763..2900776,-p4@SERPINB9
Hg19::chr6:31254912..31254928,-p@chr6:31254912..31254928
-
Hg19::chr6:53171264..53171301,-p@chr6:53171264..53171301
-
Hg19::chr6:53227601..53227602,-p@chr6:53227601..53227602
-
Hg19::chr6:53227638..53227648,-p@chr6:53227638..53227648
-
Hg19::chr7:117232436..117232445,+p8@CFTR
Hg19::chr7:117232482..117232495,+p4@CFTR
Hg19::chr7:117232504..117232529,+p3@CFTR
Hg19::chr7:117232534..117232548,+p6@CFTR
Hg19::chr7:117232554..117232568,+p2@CFTR
Hg19::chr7:117232665..117232671,+p@chr7:117232665..117232671
+
Hg19::chr7:133164387..133164423,+p15@EXOC4
Hg19::chr7:133164510..133164521,+p@chr7:133164510..133164521
+
Hg19::chr7:133164822..133164834,+p@chr7:133164822..133164834
+
Hg19::chr7:133168659..133168665,-p@chr7:133168659..133168665
-
Hg19::chr7:133168666..133168676,-p@chr7:133168666..133168676
-
Hg19::chr7:133168690..133168710,-p@chr7:133168690..133168710
-
Hg19::chr7:133286484..133286491,+p8@EXOC4
Hg19::chr7:133286534..133286545,+p5@EXOC4
Hg19::chr7:133286547..133286549,+p17@EXOC4
Hg19::chr7:133286564..133286576,+p4@EXOC4
Hg19::chr7:133286584..133286619,+p2@EXOC4
Hg19::chr7:133286621..133286630,+p11@EXOC4
Hg19::chr7:133286674..133286679,+p20@EXOC4
Hg19::chr7:142149018..142149052,-p1@AY848703
Hg19::chr7:142149108..142149111,-p2@AY848703
Hg19::chr7:142149122..142149140,-p1@M13551
p1@M14299
Hg19::chr7:142149144..142149156,-p2@M13551
p2@M14299
Hg19::chr7:142149275..142149314,-p3@M13551
p3@M14299
Hg19::chr7:142149390..142149421,-p1@TRBV5-5
Hg19::chr7:142149456..142149466,-p1@uc010lnw.1
Hg19::chr7:142149587..142149629,-p2@uc010lnw.1
Hg19::chr7:142149639..142149653,-p3@uc010lnw.1
Hg19::chr7:142149694..142149701,-p4@uc010lnw.1
Hg19::chr7:142150123..142150133,-p@chr7:142150123..142150133
-
Hg19::chr7:142150167..142150175,-p@chr7:142150167..142150175
-
Hg19::chr7:142168871..142168878,-p2@uc011kry.1
Hg19::chr7:142176831..142176842,-p1@TRBV7-4
Hg19::chr7:142247229..142247272,-p1@M13852
Hg19::chr7:142247369..142247386,-p3@AB306217
Hg19::chr7:142247402..142247437,-p1@AB306217
Hg19::chr7:142247443..142247449,-p5@AB306217
Hg19::chr7:142247484..142247501,-p2@AB306217
Hg19::chr7:142247564..142247596,-p2@TRBV7-3
Hg19::chr7:142247924..142247929,-p4@TRBV7-3
Hg19::chr7:142259525..142259549,-p1@TRBV5-2
Hg19::chr7:142499314..142499325,+p@chr7:142499314..142499325
+
Hg19::chr7:142499594..142499616,+p@chr7:142499594..142499616
+
Hg19::chr7:155532646..155532671,+p@chr7:155532646..155532671
+
Hg19::chr7:155534653..155534662,+p@chr7:155534653..155534662
+
Hg19::chr7:155534695..155534726,+p@chr7:155534695..155534726
+
Hg19::chr7:155534746..155534757,+p@chr7:155534746..155534757
+
Hg19::chr7:157406696..157406703,-p@chr7:157406696..157406703
-
Hg19::chr7:157406707..157406727,-p@chr7:157406707..157406727
-
Hg19::chr7:157406739..157406744,-p@chr7:157406739..157406744
-
Hg19::chr7:157406751..157406754,-p@chr7:157406751..157406754
-
Hg19::chr7:158808634..158808635,+p@chr7:158808634..158808635
+
Hg19::chr7:158829640..158829649,+p@chr7:158829640..158829649
+
Hg19::chr7:158829655..158829662,+p@chr7:158829655..158829662
+
Hg19::chr7:158829669..158829680,+p@chr7:158829669..158829680
+
Hg19::chr7:158852535..158852540,+p@chr7:158852535..158852540
+
Hg19::chr7:2208099..2208102,+p@chr7:2208099..2208102
+
Hg19::chr7:38398200..38398207,-p1@X04040
Hg19::chr7:38398609..38398625,-p1@uc003tgr.2
Hg19::chr7:38398721..38398737,-p1@TRGV3
Hg19::chr7:49619101..49619107,+p@chr7:49619101..49619107
+
Hg19::chr7:49619112..49619123,+p@chr7:49619112..49619123
+
Hg19::chr7:49619132..49619139,+p@chr7:49619132..49619139
+
Hg19::chr8:127262867..127262874,-p@chr8:127262867..127262874
-
Hg19::chr8:130248938..130248940,+p@chr8:130248938..130248940
+
Hg19::chr8:130253425..130253430,+p@chr8:130253425..130253430
+
Hg19::chr8:130253568..130253573,+p@chr8:130253568..130253573
+
Hg19::chr8:130253587..130253607,+p@chr8:130253587..130253607
+
Hg19::chr8:130428171..130428187,+p1@ENST00000519048
Hg19::chr8:130428190..130428203,+p2@ENST00000519048
Hg19::chr8:130428204..130428209,+p5@ENST00000519048
Hg19::chr8:144543988..144544006,-p@chr8:144543988..144544006
-
Hg19::chr8:144544026..144544036,-p@chr8:144544026..144544036
-
Hg19::chr8:144874777..144874810,-p@chr8:144874777..144874810
-
Hg19::chr8:1897525..1897530,-p@chr8:1897525..1897530
-
Hg19::chr8:1900169..1900170,+p@chr8:1900169..1900170
+
Hg19::chr8:2162891..2162901,+p@chr8:2162891..2162901
+
Hg19::chr8:2752564..2752568,-p@chr8:2752564..2752568
-
Hg19::chr8:2752711..2752716,-p@chr8:2752711..2752716
-
Hg19::chr8:2752740..2752752,-p@chr8:2752740..2752752
-
Hg19::chr8:2752886..2752888,-p@chr8:2752886..2752888
-
Hg19::chr8:2752941..2752946,-p@chr8:2752941..2752946
-
Hg19::chr8:2753014..2753021,-p@chr8:2753014..2753021
-
Hg19::chr8:2753417..2753424,-p@chr8:2753417..2753424
-
Hg19::chr8:2891404..2891430,-p@chr8:2891404..2891430
-
Hg19::chr8:2954660..2954663,-p@chr8:2954660..2954663
-
Hg19::chr8:2970547..2970561,-p8@CSMD1
Hg19::chr8:2970593..2970613,-p9@CSMD1
Hg19::chr8:2970800..2970804,-p38@CSMD1
Hg19::chr8:2970846..2970862,-p18@CSMD1
Hg19::chr8:3008963..3008975,-p@chr8:3008963..3008975
-
Hg19::chr8:3009038..3009050,-p@chr8:3009038..3009050
-
Hg19::chr8:3009111..3009122,-p@chr8:3009111..3009122
-
Hg19::chr8:3009125..3009135,-p@chr8:3009125..3009135
-
Hg19::chr8:3009164..3009174,-p@chr8:3009164..3009174
-
Hg19::chr8:3009182..3009185,-p@chr8:3009182..3009185
-
Hg19::chr8:3009202..3009211,-p@chr8:3009202..3009211
-
Hg19::chr8:3009221..3009227,-p@chr8:3009221..3009227
-
Hg19::chr8:3009231..3009257,-p@chr8:3009231..3009257
-
Hg19::chr8:3009266..3009280,-p@chr8:3009266..3009280
-
Hg19::chr8:3009288..3009296,-p@chr8:3009288..3009296
-
Hg19::chr8:3009313..3009322,-p@chr8:3009313..3009322
-
Hg19::chr8:3009332..3009343,-p@chr8:3009332..3009343
-
Hg19::chr8:3009442..3009449,-p@chr8:3009442..3009449
-
Hg19::chr8:3009468..3009477,-p@chr8:3009468..3009477
-
Hg19::chr8:3009579..3009592,-p@chr8:3009579..3009592
-
Hg19::chr8:3009601..3009610,-p@chr8:3009601..3009610
-
Hg19::chr8:3009630..3009641,-p@chr8:3009630..3009641
-
Hg19::chr8:3009684..3009704,-p@chr8:3009684..3009704
-
Hg19::chr8:3009728..3009733,-p@chr8:3009728..3009733
-
Hg19::chr8:3009736..3009741,-p@chr8:3009736..3009741
-
Hg19::chr8:6323140..6323153,-p@chr8:6323140..6323153
-
Hg19::chr8:6323168..6323179,-p@chr8:6323168..6323179
-
Hg19::chr8:6334788..6334803,+p2@MCPH1
Hg19::chr8:6334891..6334898,+p4@MCPH1
Hg19::chr9:100732622..100732644,+p@chr9:100732622..100732644
+
Hg19::chr9:139482350..139482358,-p@chr9:139482350..139482358
-
Hg19::chr9:139482367..139482372,-p@chr9:139482367..139482372
-
Hg19::chr9:139482373..139482377,-p@chr9:139482373..139482377
-
Hg19::chr9:35617130..35617156,-p@chr9:35617130..35617156
-
Hg19::chr9:35619539..35619544,-p4@CD72
Hg19::chr9:79516808..79516819,-p@chr9:79516808..79516819
-
Hg19::chr9:79516839..79516857,-p@chr9:79516839..79516857
-
Hg19::chr9:79519652..79519664,-p@chr9:79519652..79519664
-
Hg19::chr9:90219251..90219263,+p@chr9:90219251..90219263
+
Hg19::chr9:90219273..90219281,+p@chr9:90219273..90219281
+
Hg19::chr9:96054279..96054289,+p@chr9:96054279..96054289
+
Hg19::chr9:96237680..96237711,+p@chr9:96237680..96237711
+
Hg19::chrX:135180717..135180728,-p3@ENST00000468625
Hg19::chrX:135180729..135180741,-p2@ENST00000468625
Hg19::chrX:19702240..19702252,-p@chrX:19702240..19702252
-
Hg19::chrX:6995412..6995425,-p@chrX:6995412..6995425
-
Hg19::chrX:6995436..6995491,-p@chrX:6995436..6995491
-
Hg19::chrX:6995507..6995515,-p@chrX:6995507..6995515
-
Hg19::chrX:6995572..6995579,-p@chrX:6995572..6995579
-
Hg19::chrX:6996037..6996044,-p@chrX:6996037..6996044
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0042605peptide antigen binding0.0159874021678765
GO:0042287MHC protein binding0.0159874021678765
GO:0007585respiratory gaseous exchange0.0170655740479378
GO:0001764neuron migration0.0198090540169359
GO:0005224ATP-binding and phosphorylation-dependent chloride channel activity0.0331729983401609
GO:0005260channel-conductance-controlling ATPase activity0.0331729983401609
GO:0006955immune response0.0331729983401609
GO:0006968cellular defense response0.0396488492130839



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Cell Type
Ontology termp-valuen
leukocyte1.71e-34140
hematopoietic stem cell1.58e-32172
angioblastic mesenchymal cell1.58e-32172
hematopoietic cell8.30e-31182
hematopoietic oligopotent progenitor cell1.40e-29165
hematopoietic multipotent progenitor cell1.40e-29165
nongranular leukocyte1.12e-27119
hematopoietic lineage restricted progenitor cell1.04e-26124
lymphocyte8.45e-1653
common lymphoid progenitor8.45e-1653
T cell1.37e-1525
pro-T cell1.37e-1525
lymphoid lineage restricted progenitor cell2.59e-1552
myeloid leukocyte2.79e-1476
myeloid cell3.66e-14112
common myeloid progenitor3.66e-14112
mature alpha-beta T cell2.28e-1218
alpha-beta T cell2.28e-1218
immature T cell2.28e-1218
mature T cell2.28e-1218
immature alpha-beta T cell2.28e-1218
granulocyte monocyte progenitor cell7.99e-1271
macrophage dendritic cell progenitor1.25e-1165
classical monocyte1.73e-1145
myeloid lineage restricted progenitor cell2.82e-1170
monopoietic cell5.84e-1163
monocyte5.84e-1163
monoblast5.84e-1163
promonocyte5.84e-1163
CD14-positive, CD16-negative classical monocyte8.25e-1142
CD8-positive, alpha-beta T cell2.25e-0811
Uber Anatomy
Ontology termp-valuen
hematopoietic system1.01e-17102
blood island1.01e-17102
adult organism3.18e-16115
hemolymphoid system1.88e-15112
blood1.67e-0915
haemolymphatic fluid1.67e-0915
organism substance1.67e-0915
bone marrow1.46e-0880
immune system2.24e-07115
bone element4.72e-0786


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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