FFCP PHASE1:Hg19::chr12:15082050..15082081,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=121506|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26495|TSSclassifier=S|UniProt=F5GYS6|association_with_transcript=0bp_to_ENST00000540097_5end|coexpression_cluster_id=C159|description=CAGE_peak_1_at_ERP27_5end|id=chr12:15082050..15082081,-|ontology_enrichment_celltype=CL:0002076!1.65e-08!43;CL:0002251!7.49e-07!21|ontology_enrichment_celltype_v019=CL:0000349;5.67e-11;19!CL:0002541;1.17e-09;3!CL:1000415;3.28e-07;2|ontology_enrichment_celltype_v019_2=CL:0000349,4.76e-11,19;CL:0002541,1.17e-09,3;CL:1000415,3.82e-07,2|ontology_enrichment_development_v019=UBERON:0008947;3.52e-08;29|ontology_enrichment_disease=DOID:1749!1.01e-12!14;DOID:305!6.72e-09!106;DOID:0050687!1.32e-07!143|ontology_enrichment_disease_v019=DOID:1749;8.01e-07;14|ontology_enrichment_disease_v019_2=DOID:305,1.25e-08,106;DOID:0050687,3.43e-07,143;DOID:1749,7.10e-07,14|ontology_enrichment_uberon=UBERON:0005631!2.16e-12!14;UBERON:0000158!2.16e-12!14;UBERON:0004119!4.26e-10!169;UBERON:0000925!4.26e-10!169;UBERON:0006595!4.26e-10!169;UBERON:0004923!1.23e-09!57;UBERON:0000161!2.36e-09!35;UBERON:0001007!3.04e-09!155;UBERON:0001555!3.04e-09!155;UBERON:0007026!3.04e-09!155;UBERON:0000464!8.94e-09!104;UBERON:0000077!2.88e-08!130;UBERON:0003101!7.21e-08!22;UBERON:0000079!7.21e-08!22;UBERON:0004921!2.46e-07!129;UBERON:0004185!2.46e-07!129;UBERON:0003124!2.94e-07!7;UBERON:0000344!4.50e-07!12;UBERON:0000478!5.58e-07!24;UBERON:0000466!5.87e-07!126;UBERON:0001004!8.21e-07!72;UBERON:0000305!9.67e-07!7|ontology_enrichment_uberon_v019=UBERON:0005631;6.88e-14;10!UBERON:0000158;6.88e-14;10!UBERON:0000478;1.60e-12;24!UBERON:0003124;1.17e-09;3!UBERON:0000920;1.17e-09;3!UBERON:0002048;1.72e-09;22!UBERON:0000117;1.72e-09;22!UBERON:0000171;1.72e-09;22!UBERON:0000170;1.72e-09;22!UBERON:0001044;9.79e-08;6!UBERON:0003293;9.79e-08;6!UBERON:0003294;9.79e-08;6!UBERON:0010047;9.79e-08;6!UBERON:0003408;9.79e-08;6!UBERON:0000167;9.79e-08;6!UBERON:0000305;4.61e-07;7!UBERON:0002294;6.53e-07;7!UBERON:0001173;6.53e-07;7!UBERON:0001987;7.01e-07;4!UBERON:0005178;7.61e-07;34!UBERON:0002224;7.61e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.27e-19,14;UBERON:0000158,3.27e-19,14;UBERON:0003124,1.50e-14,7;UBERON:0000478,1.39e-12,24;UBERON:0004119,8.93e-11,160;UBERON:0000925,8.93e-11,160;UBERON:0006595,8.93e-11,160;UBERON:0001007,7.35e-10,145;UBERON:0001555,7.35e-10,145;UBERON:0007026,7.35e-10,145;UBERON:0000920,1.17e-09,3;UBERON:0002048,1.66e-09,22;UBERON:0000117,1.66e-09,22;UBERON:0000171,1.66e-09,22;UBERON:0000170,1.66e-09,22;UBERON:0005597,1.66e-09,22;UBERON:0000118,1.66e-09,22;UBERON:0005153,5.61e-09,37;UBERON:0004921,1.48e-08,118;UBERON:0005178,3.43e-08,34;UBERON:0002224,3.43e-08,34;UBERON:0005911,4.39e-08,82;UBERON:0001004,4.54e-08,74;UBERON:0005181,6.86e-08,35;UBERON:0001044,1.34e-07,6;UBERON:0003293,1.34e-07,6;UBERON:0003294,1.34e-07,6;UBERON:0010047,1.34e-07,6;UBERON:0000167,1.34e-07,6;UBERON:0004923,3.13e-07,66;UBERON:0001041,3.85e-07,87;UBERON:0008947,4.37e-07,38;UBERON:0003258,4.37e-07,38;UBERON:0000305,4.51e-07,7;UBERON:0001987,5.95e-07,4;UBERON:0004340,5.95e-07,4|phase1_expression=0,0,0.140954404095971,1.0007329835313,2.68176656656373,0,0,0,0,3.44027511102112,0.697801167972428,0.873765488520689,2.11013582582763,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.511450247374121,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0.773043412653187,0.545492241181669,0,0.365921118388786,0.132529768321485,1.16193942869518,1.7622379352613,2.27088765788066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30459534900897,0.171567810298526,0.219500570817251,0,0,0.462942225792648,0,0,0,0,0.234817388471643,0,0,0,0,1.71697232418975,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,1.30788020649984,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0.106727557803444,0,4.99306318531491,1.81434175997808,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,1.93375119346596,0.200506470303285,0.184161977871793,0,0,0.131124414959424,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0.328014645699706,0,2.16386124460217,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0.145016693914229,0,0,0.495854746082934,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0.1906301939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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=121506 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26495 | |||
|TSSclassifier=S | |||
|UniProt=F5GYS6 | |||
|association_with_transcript=0bp_to_ENST00000540097_5end | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_1_at_ERP27_5end | |||
|id=chr12:15082050..15082081,- | |||
|ontology_enrichment_celltype=CL:0002076!1.65e-08!43;CL:0002251!7.49e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.67e-11;19!CL:0002541;1.17e-09;3!CL:1000415;3.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.76e-11,19;CL:0002541,1.17e-09,3;CL:1000415,3.82e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.52e-08;29 | |||
|ontology_enrichment_disease=DOID:1749!1.01e-12!14;DOID:305!6.72e-09!106;DOID:0050687!1.32e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.01e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.25e-08,106;DOID:0050687,3.43e-07,143;DOID:1749,7.10e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.16e-12!14;UBERON:0000158!2.16e-12!14;UBERON:0004119!4.26e-10!169;UBERON:0000925!4.26e-10!169;UBERON:0006595!4.26e-10!169;UBERON:0004923!1.23e-09!57;UBERON:0000161!2.36e-09!35;UBERON:0001007!3.04e-09!155;UBERON:0001555!3.04e-09!155;UBERON:0007026!3.04e-09!155;UBERON:0000464!8.94e-09!104;UBERON:0000077!2.88e-08!130;UBERON:0003101!7.21e-08!22;UBERON:0000079!7.21e-08!22;UBERON:0004921!2.46e-07!129;UBERON:0004185!2.46e-07!129;UBERON:0003124!2.94e-07!7;UBERON:0000344!4.50e-07!12;UBERON:0000478!5.58e-07!24;UBERON:0000466!5.87e-07!126;UBERON:0001004!8.21e-07!72;UBERON:0000305!9.67e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.88e-14;10!UBERON:0000158;6.88e-14;10!UBERON:0000478;1.60e-12;24!UBERON:0003124;1.17e-09;3!UBERON:0000920;1.17e-09;3!UBERON:0002048;1.72e-09;22!UBERON:0000117;1.72e-09;22!UBERON:0000171;1.72e-09;22!UBERON:0000170;1.72e-09;22!UBERON:0001044;9.79e-08;6!UBERON:0003293;9.79e-08;6!UBERON:0003294;9.79e-08;6!UBERON:0010047;9.79e-08;6!UBERON:0003408;9.79e-08;6!UBERON:0000167;9.79e-08;6!UBERON:0000305;4.61e-07;7!UBERON:0002294;6.53e-07;7!UBERON:0001173;6.53e-07;7!UBERON:0001987;7.01e-07;4!UBERON:0005178;7.61e-07;34!UBERON:0002224;7.61e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.27e-19,14;UBERON:0000158,3.27e-19,14;UBERON:0003124,1.50e-14,7;UBERON:0000478,1.39e-12,24;UBERON:0004119,8.93e-11,160;UBERON:0000925,8.93e-11,160;UBERON:0006595,8.93e-11,160;UBERON:0001007,7.35e-10,145;UBERON:0001555,7.35e-10,145;UBERON:0007026,7.35e-10,145;UBERON:0000920,1.17e-09,3;UBERON:0002048,1.66e-09,22;UBERON:0000117,1.66e-09,22;UBERON:0000171,1.66e-09,22;UBERON:0000170,1.66e-09,22;UBERON:0005597,1.66e-09,22;UBERON:0000118,1.66e-09,22;UBERON:0005153,5.61e-09,37;UBERON:0004921,1.48e-08,118;UBERON:0005178,3.43e-08,34;UBERON:0002224,3.43e-08,34;UBERON:0005911,4.39e-08,82;UBERON:0001004,4.54e-08,74;UBERON:0005181,6.86e-08,35;UBERON:0001044,1.34e-07,6;UBERON:0003293,1.34e-07,6;UBERON:0003294,1.34e-07,6;UBERON:0010047,1.34e-07,6;UBERON:0000167,1.34e-07,6;UBERON:0004923,3.13e-07,66;UBERON:0001041,3.85e-07,87;UBERON:0008947,4.37e-07,38;UBERON:0003258,4.37e-07,38;UBERON:0000305,4.51e-07,7;UBERON:0001987,5.95e-07,4;UBERON:0004340,5.95e-07,4 | |||
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|short_description=p1@ERP27 | |||
}} |
Revision as of 21:56, 10 September 2013
Short description: | p1@ERP27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ERP27_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | 0bp_to_ENST00000540097_5end |
EntrezGene: | ERP27 |
HGNC: | 26495 |
UniProt: | F5GYS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.76e-11 | 19 |
chorionic membrane mesenchymal stem cell | 1.17e-09 | 3 |
epithelial cell of gall bladder | 3.82e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.27e-19 | 14 |
membranous layer | 3.27e-19 | 14 |
chorion | 1.50e-14 | 7 |
extraembryonic structure | 1.39e-12 | 24 |
endoderm-derived structure | 8.93e-11 | 160 |
endoderm | 8.93e-11 | 160 |
presumptive endoderm | 8.93e-11 | 160 |
digestive system | 7.35e-10 | 145 |
digestive tract | 7.35e-10 | 145 |
primitive gut | 7.35e-10 | 145 |
egg chorion | 1.17e-09 | 3 |
lung | 1.66e-09 | 22 |
respiratory tube | 1.66e-09 | 22 |
respiration organ | 1.66e-09 | 22 |
pair of lungs | 1.66e-09 | 22 |
lung primordium | 1.66e-09 | 22 |
lung bud | 1.66e-09 | 22 |
epithelial bud | 5.61e-09 | 37 |
subdivision of digestive tract | 1.48e-08 | 118 |
thoracic cavity element | 3.43e-08 | 34 |
thoracic cavity | 3.43e-08 | 34 |
endo-epithelium | 4.39e-08 | 82 |
respiratory system | 4.54e-08 | 74 |
thoracic segment organ | 6.86e-08 | 35 |
saliva-secreting gland | 1.34e-07 | 6 |
gland of oral region | 1.34e-07 | 6 |
gland of foregut | 1.34e-07 | 6 |
oral gland | 1.34e-07 | 6 |
oral cavity | 1.34e-07 | 6 |
organ component layer | 3.13e-07 | 66 |
foregut | 3.85e-07 | 87 |
respiratory primordium | 4.37e-07 | 38 |
endoderm of foregut | 4.37e-07 | 38 |
amnion | 4.51e-07 | 7 |
placenta | 5.95e-07 | 4 |
allantois | 5.95e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.25e-08 | 106 |
cell type cancer | 3.43e-07 | 143 |
squamous cell carcinoma | 7.10e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.