FFCP PHASE1:Hg19::chr14:102829199..102829237,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51550 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23789 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BW66,F5H7P3 | |||
|association_with_transcript=0bp_to_ENST00000216756,ENST00000541568,ENST00000558523_5end | |||
|description=CAGE_peak_1_at_CINP_5end | |||
|id=chr14:102829199..102829237,- | |||
|ontology_enrichment_celltype=CL:0000055!3.09e-12!180;CL:0000183!1.70e-10!59;CL:0000222!1.74e-09!119;CL:0000680!5.46e-09!57;CL:0000056!5.46e-09!57;CL:0000355!5.46e-09!57;CL:0000187!7.89e-09!54;CL:0000393!1.05e-08!60;CL:0000211!1.05e-08!60;CL:0000057!1.18e-08!75;CL:0000192!4.96e-08!42;CL:0000514!4.96e-08!42;CL:0002371!3.42e-07!591;CL:0002620!7.54e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.57e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.17e-10,121;CL:0000680,2.57e-09,58;CL:0000056,2.57e-09,58;CL:0000355,2.57e-09,58;CL:0000187,3.69e-09,55;CL:0000393,5.02e-09,61;CL:0000211,5.02e-09,61;CL:0000057,1.40e-08,76;CL:0000192,2.28e-08,43;CL:0000514,2.28e-08,43;CL:0002620,7.54e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.98e-12!365;UBERON:0000119!8.58e-12!312;UBERON:0000483!2.51e-11!309;UBERON:0000477!6.38e-11!286;UBERON:0000914!7.01e-11!83;UBERON:0002329!7.01e-11!83;UBERON:0003077!7.01e-11!83;UBERON:0003059!7.01e-11!83;UBERON:0007282!7.01e-11!83;UBERON:0009618!7.01e-11!83;UBERON:0007285!7.01e-11!83;UBERON:0000025!9.96e-11!194;UBERON:0004290!5.97e-10!70;UBERON:0004111!1.29e-09!241;UBERON:0005256!1.69e-09!143;UBERON:0000486!5.35e-09!82;UBERON:0000481!7.56e-09!347;UBERON:0003914!1.51e-08!118;UBERON:0001134!2.05e-07!61;UBERON:0002036!2.05e-07!61;UBERON:0003082!2.05e-07!61;UBERON:0002100!2.36e-07!216;UBERON:0000055!2.46e-07!69;UBERON:0002049!5.15e-07!79;UBERON:0007798!5.15e-07!79;UBERON:0001637!6.01e-07!42;UBERON:0003509!6.01e-07!42;UBERON:0004572!6.01e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,6.12e-13,309;UBERON:0007503,1.58e-12,78;UBERON:0000483,1.89e-12,306;UBERON:0000025,7.43e-11,192;UBERON:0003077,2.00e-10,72;UBERON:0007285,2.00e-10,72;UBERON:0007524,2.36e-10,73;UBERON:0002329,2.83e-10,71;UBERON:0003059,2.83e-10,71;UBERON:0007282,2.83e-10,71;UBERON:0004290,2.83e-10,71;UBERON:0009618,2.83e-10,71;UBERON:0004111,1.03e-09,240;UBERON:0000486,2.69e-09,83;UBERON:0003914,2.75e-08,117;UBERON:0001134,1.03e-07,62;UBERON:0002036,1.03e-07,62;UBERON:0003082,1.03e-07,62;UBERON:0000055,2.11e-07,68;UBERON:0005256,4.03e-07,122;UBERON:0002049,4.56e-07,78;UBERON:0007798,4.56e-07,78;UBERON:0002385,5.99e-07,64;UBERON:0001015,5.99e-07,64;UBERON:0000383,5.99e-07,64;UBERON:0001637,6.01e-07,42;UBERON:0003509,6.01e-07,42;UBERON:0004572,6.01e-07,42;UBERON:0000490,7.02e-07,148;UBERON:0010314,8.07e-07,132 | |||
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| |||
|short_description=p1@CINP | |||
}} |
Revision as of 22:05, 11 January 2014
Short description: | p1@CINP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CINP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000216756, ENST00000541568, ENST00000558523_5end |
EntrezGene: | CINP |
HGNC: | 23789 |
UniProt: | Q9BW66F5H7P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.17e-10 | 121 |
muscle precursor cell | 2.57e-09 | 58 |
myoblast | 2.57e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-09 | 58 |
muscle cell | 3.69e-09 | 55 |
electrically responsive cell | 5.02e-09 | 61 |
electrically active cell | 5.02e-09 | 61 |
fibroblast | 1.40e-08 | 76 |
smooth muscle cell | 2.28e-08 | 43 |
smooth muscle myoblast | 2.28e-08 | 43 |
skin fibroblast | 7.54e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
cell layer | 6.12e-13 | 309 |
epithelial vesicle | 1.58e-12 | 78 |
epithelium | 1.89e-12 | 306 |
tube | 7.43e-11 | 192 |
paraxial mesoderm | 2.00e-10 | 72 |
presumptive paraxial mesoderm | 2.00e-10 | 72 |
dense mesenchyme tissue | 2.36e-10 | 73 |
somite | 2.83e-10 | 71 |
presomitic mesoderm | 2.83e-10 | 71 |
presumptive segmental plate | 2.83e-10 | 71 |
dermomyotome | 2.83e-10 | 71 |
trunk paraxial mesoderm | 2.83e-10 | 71 |
anatomical conduit | 1.03e-09 | 240 |
multilaminar epithelium | 2.69e-09 | 83 |
epithelial tube | 2.75e-08 | 117 |
skeletal muscle tissue | 1.03e-07 | 62 |
striated muscle tissue | 1.03e-07 | 62 |
myotome | 1.03e-07 | 62 |
vessel | 2.11e-07 | 68 |
trunk mesenchyme | 4.03e-07 | 122 |
vasculature | 4.56e-07 | 78 |
vascular system | 4.56e-07 | 78 |
muscle tissue | 5.99e-07 | 64 |
musculature | 5.99e-07 | 64 |
musculature of body | 5.99e-07 | 64 |
artery | 6.01e-07 | 42 |
arterial blood vessel | 6.01e-07 | 42 |
arterial system | 6.01e-07 | 42 |
unilaminar epithelium | 7.02e-07 | 148 |
structure with developmental contribution from neural crest | 8.07e-07 | 132 |