FFCP PHASE1:Hg19::chr14:22336953..22336965,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_uc010tmh.1_5end | |||
|cluster_id=chr14:22336953..22336965,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_uc010tmh.1_5end | |||
|id=chr14:22336953..22336965,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.13e-35!18;CL:0000789!1.13e-35!18;CL:0002420!1.13e-35!18;CL:0002419!1.13e-35!18;CL:0000790!1.13e-35!18;CL:0000084!4.82e-33!25;CL:0000827!4.82e-33!25;CL:0000625!2.67e-25!11;CL:0000838!2.48e-19!52;CL:0000542!7.76e-19!53;CL:0000051!7.76e-19!53;CL:0000738!2.16e-14!140;CL:0000624!2.25e-14!6;CL:0002087!2.45e-13!119;CL:0002031!2.25e-11!124;CL:0000037!7.54e-10!172;CL:0000566!7.54e-10!172;CL:0000988!8.77e-09!182;CL:0002032!1.90e-08!165;CL:0000837!1.90e-08!165;CL:0000898!1.97e-08!3;CL:0000842!1.83e-07!3;CL:0000623!2.67e-07!3;CL:0000825!2.67e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.04e-57;18!CL:0000789;1.04e-57;18!CL:0002419;1.04e-57;18!CL:0000625;2.01e-40;11!CL:0000084;2.42e-40;25!CL:0000624;1.98e-22;6!CL:0000898;9.43e-13;3!CL:0000542;3.30e-12;53!CL:0000226;3.51e-11;3!CL:0000842;3.51e-11;3!CL:0000623;6.13e-11;3!CL:0000815;4.54e-09;2!CL:0000792;4.54e-09;2!CL:0002677;4.54e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.06e-57,18;CL:0000789,1.06e-57,18;CL:0002420,1.06e-57,18;CL:0002419,1.06e-57,18;CL:0000790,1.06e-57,18;CL:0000625,2.25e-40,11;CL:0000084,2.45e-40,25;CL:0000827,2.45e-40,25;CL:0000838,4.63e-24,52;CL:0000542,1.64e-23,53;CL:0000051,1.64e-23,53;CL:0000624,1.80e-22,6;CL:0000898,9.07e-13,3;CL:0002087,2.31e-11,115;CL:0000226,3.38e-11,3;CL:0000842,3.38e-11,3;CL:0000623,6.24e-11,3;CL:0000825,6.24e-11,3;CL:0000738,7.51e-10,136;CL:0000815,4.82e-09,2;CL:0000792,4.82e-09,2;CL:0002677,4.82e-09,2;CL:0002031,1.21e-07,120;CL:0000037,5.67e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;1.04e-57;18!CL:0000051;3.30e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.96e-20!15;UBERON:0000179!4.96e-20!15;UBERON:0000463!4.96e-20!15;UBERON:0002193!1.25e-08!112;UBERON:0002390!2.08e-08!102;UBERON:0003061!2.08e-08!102;UBERON:0004177!3.20e-08!7;UBERON:0007023!6.37e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-32;15!UBERON:0000179;2.03e-32;15!UBERON:0000463;2.03e-32;15!UBERON:0002390;2.19e-17;32!UBERON:0002193;2.01e-11;42!UBERON:0002370;1.93e-08;2!UBERON:0005058;1.93e-08;2!UBERON:0009113;1.93e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.81e-32,15;UBERON:0000179,1.81e-32,15;UBERON:0000463,1.81e-32,15;UBERON:0002370,3.12e-09,4;UBERON:0005058,3.12e-09,4;UBERON:0009113,3.12e-09,4;UBERON:0003295,3.12e-09,4;UBERON:0005562,3.12e-09,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1310525448192,0,0,0,0,0,0,0,0,0,0.434021741431704,0.447830948479849,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,3.73748563216283,2.35806457649499,4.72883447698871,11.8702411727381,8.14805666583976,8.5220605032252,3.89653456815823,13.5920757399912,14.7302953737419,15.2858387262699,14.8942125070759,6.91693126518646,6.50296737799391,7.5641436117691,4.14525026678773,15.0697604582227,10.0834862950201,8.56130649887082,7.31748666634838,13.4838117810104,11.8798353016596,12.026960591892,10.6268270648191,9.5569624297229,11.7195021694155,7.60361635558699,22.8874180998215,30.2048402324427,11.2437653897111,7.57687206540854,7.39015197228942,4.23374160771938,3.4767225451856,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,1.50939302401662,1.79680250791648,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,2.37285620900479,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,4.56702848308952,3.82318603571188,1.13929437434833,11.1968934465161,12.752230465672,1.94541993357815,4.86028293514303,3.17250070517708,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0,0.563903507879121,0.709036767709349,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,5.81300188524055,4.59352885789349,0,0,0,0,0,2.22261774948139,0.358611026963382,0,0,0,0,0,0,0,0,0,1.61019034872821,0 | ||
|short_description=p2@uc010tmh.1 | |||
}} | }} |
Latest revision as of 19:06, 24 July 2015
Short description: | p2@uc010tmh.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc010tmh.1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -14bp_to_uc010tmh.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.06e-57 | 18 |
alpha-beta T cell | 1.06e-57 | 18 |
immature T cell | 1.06e-57 | 18 |
mature T cell | 1.06e-57 | 18 |
immature alpha-beta T cell | 1.06e-57 | 18 |
CD8-positive, alpha-beta T cell | 2.25e-40 | 11 |
T cell | 2.45e-40 | 25 |
pro-T cell | 2.45e-40 | 25 |
lymphoid lineage restricted progenitor cell | 4.63e-24 | 52 |
lymphocyte | 1.64e-23 | 53 |
common lymphoid progenitor | 1.64e-23 | 53 |
CD4-positive, alpha-beta T cell | 1.80e-22 | 6 |
naive T cell | 9.07e-13 | 3 |
nongranular leukocyte | 2.31e-11 | 115 |
single nucleate cell | 3.38e-11 | 3 |
mononuclear cell | 3.38e-11 | 3 |
natural killer cell | 6.24e-11 | 3 |
pro-NK cell | 6.24e-11 | 3 |
leukocyte | 7.51e-10 | 136 |
regulatory T cell | 4.82e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.82e-09 | 2 |
naive regulatory T cell | 4.82e-09 | 2 |
hematopoietic lineage restricted progenitor cell | 1.21e-07 | 120 |
hematopoietic stem cell | 5.67e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 1.81e-32 | 15 |
haemolymphatic fluid | 1.81e-32 | 15 |
organism substance | 1.81e-32 | 15 |
thymus | 3.12e-09 | 4 |
hemolymphoid system gland | 3.12e-09 | 4 |
thymic region | 3.12e-09 | 4 |
pharyngeal gland | 3.12e-09 | 4 |
thymus primordium | 3.12e-09 | 4 |