FFCP PHASE1:Hg19::chr14:22782867..22782896,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001wdq.2_5end | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_1_at_uc001wdq.2_5end | |||
|id=chr14:22782867..22782896,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.38e-34!18;CL:0000789!2.38e-34!18;CL:0002420!2.38e-34!18;CL:0002419!2.38e-34!18;CL:0000790!2.38e-34!18;CL:0000625!6.67e-24!11;CL:0000084!2.54e-23!25;CL:0000827!2.54e-23!25;CL:0000624!2.25e-14!6;CL:0000838!1.19e-12!52;CL:0000542!2.60e-12!53;CL:0000051!2.60e-12!53;CL:0000898!3.84e-08!3;CL:0000842!1.06e-07!3;CL:0000623!4.04e-07!3;CL:0000825!4.04e-07!3;CL:0002087!8.84e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.88e-56;18!CL:0000789;1.88e-56;18!CL:0002419;1.88e-56;18!CL:0000084;9.88e-40;25!CL:0000625;1.24e-33;11!CL:0000624;1.81e-28;6!CL:0000898;2.26e-15;3!CL:0000815;6.10e-11;2!CL:0000792;6.10e-11;2!CL:0002677;6.10e-11;2!CL:0000542;4.66e-09;53!CL:0000226;2.58e-07;3!CL:0000842;2.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.72e-56,18;CL:0000789,2.72e-56,18;CL:0002420,2.72e-56,18;CL:0002419,2.72e-56,18;CL:0000790,2.72e-56,18;CL:0000084,1.28e-39,25;CL:0000827,1.28e-39,25;CL:0000625,2.20e-33,11;CL:0000624,1.38e-28,6;CL:0000838,2.34e-17,52;CL:0000542,5.73e-17,53;CL:0000051,5.73e-17,53;CL:0000898,2.00e-15,3;CL:0000815,5.53e-11,2;CL:0000792,5.53e-11,2;CL:0002677,5.53e-11,2;CL:0002087,3.79e-08,115;CL:0000738,2.21e-07,136;CL:0000226,2.76e-07,3;CL:0000842,2.76e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.88e-56;18!CL:0000051;4.66e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.59e-16!15;UBERON:0000179!3.59e-16!15;UBERON:0000463!3.59e-16!15;UBERON:0004177!2.17e-08!7;UBERON:0007023!5.76e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.08e-11;2!UBERON:0005058;1.08e-11;2!UBERON:0009113;1.08e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.25e-12,4;UBERON:0005058,3.25e-12,4;UBERON:0009113,3.25e-12,4;UBERON:0003295,3.25e-12,4;UBERON:0005562,3.25e-12,4;UBERON:0003351,2.75e-08,6;UBERON:0001042,3.21e-08,10;UBERON:0009145,3.21e-08,10;UBERON:0006562,1.78e-07,11;UBERON:0004177,3.70e-07,7;UBERON:0005057,3.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0.868043482863407,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16380747125216,1.96505381374582,2.05601498999509,6.52027332023645,3.58514493296949,3.31413464014313,7.79306913631645,4.90206010294764,4.71369451959739,4.43067789167242,16.2482318259009,5.89220070738106,6.37290803043403,5.09757504271396,9.119550586933,7.53488022911136,5.48660283699624,5.35081656179426,10.4535523804977,3.85251765171725,2.29932296161153,3.4362744548263,8.6026695286631,3.18565414324097,1.30216690771284,2.85135613334512,1.50575119077773,3.19966527886046,7.49584359314075,1.18388626022008,0.821127996921047,1.00803371612366,0.267440195783507,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.1097324560988,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.647142602455851,3.30855429190677,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,1.19115887728894,0.822724546172388,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0.714193294391221,12.8531930573652,12.8494658592426,0,0.0636471582781649,0,0.217716747896961,0,1.48174516632093,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,1.81146414231924,0 | |||
|short_description=p1@uc001wdq.2 | |||
}} |
Revision as of 19:06, 11 January 2014
Short description: | p1@uc001wdq.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001wdq.2_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 0bp_to_uc001wdq.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.72e-56 | 18 |
alpha-beta T cell | 2.72e-56 | 18 |
immature T cell | 2.72e-56 | 18 |
mature T cell | 2.72e-56 | 18 |
immature alpha-beta T cell | 2.72e-56 | 18 |
T cell | 1.28e-39 | 25 |
pro-T cell | 1.28e-39 | 25 |
CD8-positive, alpha-beta T cell | 2.20e-33 | 11 |
CD4-positive, alpha-beta T cell | 1.38e-28 | 6 |
lymphoid lineage restricted progenitor cell | 2.34e-17 | 52 |
lymphocyte | 5.73e-17 | 53 |
common lymphoid progenitor | 5.73e-17 | 53 |
naive T cell | 2.00e-15 | 3 |
regulatory T cell | 5.53e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.53e-11 | 2 |
naive regulatory T cell | 5.53e-11 | 2 |
nongranular leukocyte | 3.79e-08 | 115 |
leukocyte | 2.21e-07 | 136 |
single nucleate cell | 2.76e-07 | 3 |
mononuclear cell | 2.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.25e-12 | 4 |
hemolymphoid system gland | 3.25e-12 | 4 |
thymic region | 3.25e-12 | 4 |
pharyngeal gland | 3.25e-12 | 4 |
thymus primordium | 3.25e-12 | 4 |
pharyngeal epithelium | 2.75e-08 | 6 |
chordate pharynx | 3.21e-08 | 10 |
pharyngeal region of foregut | 3.21e-08 | 10 |
pharynx | 1.78e-07 | 11 |
hemopoietic organ | 3.70e-07 | 7 |
immune organ | 3.70e-07 | 7 |