FFCP PHASE1:Hg19::chr17:48262749..48262800,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:48262749..48262800,+ to FFCP PHASE1:Hg19::chr17:48262749..48262800,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-63bp_to_CU691369_5end | |||
|cluster_id=chr17:48262749..48262800,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_2_at_CU691369_5end | |||
|id=chr17:48262749..48262800,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.55e-33!180;CL:0000057!1.57e-23!75;CL:0000183!4.39e-12!59;CL:0000680!1.36e-11!57;CL:0000056!1.36e-11!57;CL:0000355!1.36e-11!57;CL:0000187!5.51e-11!54;CL:0000393!3.52e-10!60;CL:0000211!3.52e-10!60;CL:0002620!8.47e-09!23;CL:0000048!9.99e-09!430;CL:0000144!1.90e-08!625;CL:0000499!2.28e-08!27;CL:0000723!3.01e-08!436;CL:0000034!4.34e-08!444;CL:0002334!5.34e-08!12;CL:0002371!6.30e-08!591;CL:0000192!8.11e-08!42;CL:0000514!8.11e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000134;6.78e-12;55!CL:0000057;9.85e-11;73!CL:0002620;1.52e-10;23!CL:0000723;1.66e-10;61!CL:0000048;3.01e-10;58!CL:0002320;4.13e-10;188!CL:0002334;2.51e-09;12!CL:0000034;8.42e-09;69!CL:0002570;1.02e-07;8!CL:0000499;2.15e-07;28!CL:0000187;2.25e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.05e-28,76;CL:0000048,2.88e-16,427;CL:0000723,2.76e-15,433;CL:0000034,5.34e-15,441;CL:0000680,2.19e-12,58;CL:0000056,2.19e-12,58;CL:0000355,2.19e-12,58;CL:0000187,1.16e-11,55;CL:0002620,1.33e-10,23;CL:0002320,5.68e-10,361;CL:0000393,9.45e-10,61;CL:0000211,9.45e-10,61;CL:0002334,2.59e-09,12;CL:0000134,3.78e-08,354;CL:0000192,7.17e-08,43;CL:0000514,7.17e-08,43;CL:0002570,1.01e-07,8;CL:0000499,2.32e-07,28;CL:0000219,2.48e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000355;3.66e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.11e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.13e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.11e-14!83;UBERON:0002329!4.11e-14!83;UBERON:0003077!4.11e-14!83;UBERON:0003059!4.11e-14!83;UBERON:0007282!4.11e-14!83;UBERON:0009618!4.11e-14!83;UBERON:0007285!4.11e-14!83;UBERON:0005256!2.87e-12!143;UBERON:0004290!3.93e-12!70;UBERON:0002385!1.31e-11!63;UBERON:0001015!1.31e-11!63;UBERON:0000383!1.31e-11!63;UBERON:0001134!1.42e-11!61;UBERON:0002036!1.42e-11!61;UBERON:0003082!1.42e-11!61;UBERON:0000486!1.62e-10!82;UBERON:0002100!3.96e-08!216;UBERON:0000475!6.83e-08!365;UBERON:0003102!6.84e-08!95;UBERON:0001013!7.58e-08!14;UBERON:0002199!2.61e-07!45;UBERON:0002416!2.61e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;5.61e-10;198!UBERON:0001013;1.79e-08;14!UBERON:0002204;2.69e-07;70!UBERON:0003104;6.99e-07;7!UBERON:0009142;6.99e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,9.32e-14,73;UBERON:0002329,1.44e-13,71;UBERON:0003059,1.44e-13,71;UBERON:0007282,1.44e-13,71;UBERON:0004290,1.44e-13,71;UBERON:0009618,1.44e-13,71;UBERON:0007503,1.64e-13,78;UBERON:0003077,3.77e-13,72;UBERON:0007285,3.77e-13,72;UBERON:0001134,1.24e-12,62;UBERON:0002036,1.24e-12,62;UBERON:0003082,1.24e-12,62;UBERON:0002385,8.82e-12,64;UBERON:0001015,8.82e-12,64;UBERON:0000383,8.82e-12,64;UBERON:0003104,1.41e-11,160;UBERON:0009142,1.41e-11,160;UBERON:0005256,5.32e-11,122;UBERON:0000486,5.90e-11,83;UBERON:0002384,6.61e-10,371;UBERON:0002199,9.86e-09,46;UBERON:0002416,9.86e-09,46;UBERON:0001013,1.69e-08,14;UBERON:0003102,3.76e-07,99;UBERON:0000926,4.40e-07,315;UBERON:0004120,4.40e-07,315;UBERON:0006603,4.40e-07,315;UBERON:0002097,8.93e-07,41 | |||
|phase1_expression=34.1555353028646,35.3265864420122,28.4727896273862,14.0102617694383,29.499432232201,18.3191090061077,58.2589719787114,3.15859936713415,1.82829939739887,1.96587149201207,0,4.80571018686379,18.4636884759917,16.5846912966462,7.95353701746998,13.4465029290355,6.02694528023977,8.03341099426111,19.5173119516203,11.6965005172949,22.2360753456236,20.3745568960757,1.43117993565528,0.547497700291537,3.76627918784408,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,22.13312837022,78.124025286397,91.4441055532953,1.00267582127178,86.4733718196118,0.795285947051099,12.1658717575659,3.30871860074237,7.31707011626461,11.7698612828789,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.549605231791222,0,0,0,107.842913517884,23.3000141462827,21.7151056533679,92.361391881118,36.1761749842324,12.3349072031308,0,179.573975247692,1.24484414159907,5.92726957106628,2.94231425604226,18.6169636003266,14.98057403648,3.98346434117454,4.37024107562449,0,8.21967743034906,1.76151747965647,1.13311061057692,1.40450806702248,4.69554593886255,5.28187564440602,2.47981874821837,28.5120685747693,65.7730031880961,2.73048408581408,28.0261075308333,1.17835279767846,3.00284447692714,0.554128230968366,15.3642167308293,30.955267375701,24.1883274839621,26.996859592085,62.427593219724,45.4877238183549,34.5448998890086,89.1270555370675,23.7020817248409,61.833729610951,21.775672190796,112.236260940442,27.5746724606192,44.17591049272,22.5522251673633,26.671599375104,76.6820719835887,15.6165752252842,13.90396856946,0,0.272746120590835,0,0.609868530647977,0,1.16193942869518,1.55491582523056,1.00928340350251,0,0,49.5295522408522,1.38134921352481,16.7172454091512,33.9283356384705,0.118306800039844,0.337169380156203,0,0.55146986366197,0,0,0,0.392442930250692,0,0,19.6338483324824,38.6879570651516,54.3932232126505,0,0,1.77236972004421,0,0,28.9949599404508,0.548751427043128,0,0,0.0925884451585296,3.25808305310325,7.27954349695705,7.21656710126366,6.02838105870399,10.0971477042807,0.144366447761074,0,0,0,0,0,0,0,0,2.85569617938061,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0.825472625798197,0,0,0,2.77634230298973,0,0,2.69114602428866,5.23152082599936,16.9411440246395,22.10546339458,78.6844180874141,55.789981668696,24.2003686092232,44.7231978718874,13.3747834616314,4.25547396069835,13.0546867717889,107.376473237269,183.948724227699,23.0507294298615,50.8148447498227,90.9803388780917,50.6849198677395,8.13886318060882,0.871533458600294,7.39800134747222,0,0,0,55.113716763064,75.8088776505152,0,3.61953266668948,8.83548186966649,1.25342674267927,0,0,0,0,0,0,0,1.00509759200609,0.637938751653163,0,0,0,20.4894791170964,30.5104017846403,11.6643960190886,342.112067218178,412.349393110241,236.553622550902,49.3165357119323,0.902838299183157,0,21.729344971426,47.8242430945514,4.05612170791747,15.3783997608507,26.6289574149327,67.9423979145495,0,0,0,5.15316871458641,64.9098214090939,84.3668918389808,23.8183495506026,88.547558587212,76.6202057802291,43.4391715976826,10.2341449813341,164.714415251054,16.325987308949,28.3745836596886,60.015863155837,20.6960433154799,14.0198695879578,31.6092229411089,0,0.40101294060657,0.0920809889358963,27.2110242150118,33.1405925772225,21.1110308084673,0,0.308061348417659,1.56869953835371,0,0.73886140225013,0,0,2.15915916102139,4.62681758070868,10.0250181891226,12.5422443463713,0,0,0.895499018888713,0,0,0.256450125116389,0.656029291399411,1.30151357865721,0.206082023295445,5.31102895946392,3.4653989966647,0.574265537996172,0.650060246036521,46.5983396548063,15.7573270816159,4.1593126620954,5.98664331431905,5.23778975441216,12.3533281598515,12.1814022887952,5.96586391912706,149.840915993459,0.661139661443912,1.34533047155574,0.638063562472921,0.30347334256665,6.507837690162,117.739817714659,0.6970372701606,5.85263802334569,0,1.73986598415015,1.11194531462352,0,6.32669227911434,9.49138274156178,36.0291066516029,17.1451520178594,10.698474700848,1.27281299170375,0.78494864019923,14.0300516914985,17.0212958436354,16.6115487307418,0.404364963146632,0,0,21.455884519942,24.6150624527597,0,33.1694784721405,59.1074705566519,4.52032466480971,2.2054613741845,9.28814565337708,0,21.4146947678674,34.1065271064249,0.202910376962704,2.78841148289775,0.563391205064483,58.6552430514571,102.768496899725,0,6.74046021734136,64.1767211304899,52.3578879806244,9.10735617037716,9.79817216685952,0,1.34060455107157,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.71623345421307,0.296964680832639,0.307160702099232,0,0,0,0,0,2.98871982376605,0.276283915531148,0,0.102268682502155,0,20.2175731980175,0,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0.08745999999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| ||
|short_description=p2@CU691369 | |||
}} | }} |
Latest revision as of 18:30, 25 July 2015
Short description: | p2@CU691369 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU691369_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | -63bp_to_CU691369_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.05e-28 | 76 |
multi fate stem cell | 2.88e-16 | 427 |
somatic stem cell | 2.76e-15 | 433 |
stem cell | 5.34e-15 | 441 |
muscle precursor cell | 2.19e-12 | 58 |
myoblast | 2.19e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.19e-12 | 58 |
muscle cell | 1.16e-11 | 55 |
skin fibroblast | 1.33e-10 | 23 |
connective tissue cell | 5.68e-10 | 361 |
electrically responsive cell | 9.45e-10 | 61 |
electrically active cell | 9.45e-10 | 61 |
preadipocyte | 2.59e-09 | 12 |
mesenchymal cell | 3.78e-08 | 354 |
smooth muscle cell | 7.17e-08 | 43 |
smooth muscle myoblast | 7.17e-08 | 43 |
mesenchymal stem cell of adipose | 1.01e-07 | 8 |
stromal cell | 2.32e-07 | 28 |
motile cell | 2.48e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 9.32e-14 | 73 |
somite | 1.44e-13 | 71 |
presomitic mesoderm | 1.44e-13 | 71 |
presumptive segmental plate | 1.44e-13 | 71 |
dermomyotome | 1.44e-13 | 71 |
trunk paraxial mesoderm | 1.44e-13 | 71 |
epithelial vesicle | 1.64e-13 | 78 |
paraxial mesoderm | 3.77e-13 | 72 |
presumptive paraxial mesoderm | 3.77e-13 | 72 |
skeletal muscle tissue | 1.24e-12 | 62 |
striated muscle tissue | 1.24e-12 | 62 |
myotome | 1.24e-12 | 62 |
muscle tissue | 8.82e-12 | 64 |
musculature | 8.82e-12 | 64 |
musculature of body | 8.82e-12 | 64 |
mesenchyme | 1.41e-11 | 160 |
entire embryonic mesenchyme | 1.41e-11 | 160 |
trunk mesenchyme | 5.32e-11 | 122 |
multilaminar epithelium | 5.90e-11 | 83 |
connective tissue | 6.61e-10 | 371 |
integument | 9.86e-09 | 46 |
integumental system | 9.86e-09 | 46 |
adipose tissue | 1.69e-08 | 14 |
surface structure | 3.76e-07 | 99 |
mesoderm | 4.40e-07 | 315 |
mesoderm-derived structure | 4.40e-07 | 315 |
presumptive mesoderm | 4.40e-07 | 315 |
skin of body | 8.93e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.13e-07 | 14 |