FFCP PHASE1:Hg19::chr17:48275117..48275151,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:48275117..48275151,-
|short_description=p@chr17:48275117..48275151,-
|description=CAGE_peak_at_chr17:48275117..48275151,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:48275117..48275151,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48275117..48275151,- | |||
|id=chr17:48275117..48275151,- | |||
|ontology_enrichment_celltype=CL:0000055!1.95e-37!180;CL:0000057!5.98e-25!75;CL:0000183!1.79e-13!59;CL:0000680!4.24e-13!57;CL:0000056!4.24e-13!57;CL:0000355!4.24e-13!57;CL:0000187!6.75e-13!54;CL:0000048!1.87e-12!430;CL:0000393!8.85e-12!60;CL:0000211!8.85e-12!60;CL:0000723!1.44e-11!436;CL:0000034!5.79e-11!444;CL:0000192!1.41e-10!42;CL:0000514!1.41e-10!42;CL:0002620!7.32e-09!23;CL:0002334!1.18e-08!12;CL:0002371!9.73e-08!591;CL:0000144!2.83e-07!625;CL:0000499!6.43e-07!27;CL:0002494!7.01e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.93e-12;55!CL:0000723;4.20e-11;61!CL:0000048;4.32e-11;58!CL:0002320;5.41e-09;188!CL:0000057;1.34e-08;73!CL:0002334;1.37e-08;12!CL:0002570;2.98e-08;8!CL:0000034;1.31e-07;69!CL:0000499;3.21e-07;28!CL:0002620;9.73e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.95e-22,76;CL:0000048,3.11e-17,427;CL:0000723,2.00e-16,433;CL:0000034,2.18e-15,441;CL:0002320,5.74e-11,361;CL:0000680,3.05e-10,58;CL:0000056,3.05e-10,58;CL:0000355,3.05e-10,58;CL:0000187,8.82e-10,55;CL:0000134,1.20e-09,354;CL:0002334,1.44e-08,12;CL:0000192,1.75e-08,43;CL:0000514,1.75e-08,43;CL:0002570,4.27e-08,8;CL:0000393,5.73e-08,61;CL:0000211,5.73e-08,61;CL:0000219,6.99e-08,386;CL:0000499,2.32e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.87e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.72e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.20e-16!83;UBERON:0002329!9.20e-16!83;UBERON:0003077!9.20e-16!83;UBERON:0003059!9.20e-16!83;UBERON:0007282!9.20e-16!83;UBERON:0009618!9.20e-16!83;UBERON:0007285!9.20e-16!83;UBERON:0004290!9.00e-15!70;UBERON:0001134!5.18e-14!61;UBERON:0002036!5.18e-14!61;UBERON:0003082!5.18e-14!61;UBERON:0002385!9.94e-14!63;UBERON:0001015!9.94e-14!63;UBERON:0000383!9.94e-14!63;UBERON:0000486!4.44e-12!82;UBERON:0005256!8.49e-10!143;UBERON:0002100!1.68e-07!216;UBERON:0004872!1.95e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.02e-08;198!UBERON:0004457;3.03e-08;9!UBERON:0000042;3.03e-08;9!UBERON:0003688;3.08e-08;6!UBERON:0002358;3.08e-08;6!UBERON:0003684;3.08e-08;6!UBERON:0001178;3.08e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.93e-11,371;UBERON:0001134,5.42e-11,62;UBERON:0002036,5.42e-11,62;UBERON:0003082,5.42e-11,62;UBERON:0007524,1.28e-10,73;UBERON:0002385,2.49e-10,64;UBERON:0001015,2.49e-10,64;UBERON:0000383,2.49e-10,64;UBERON:0002329,2.99e-10,71;UBERON:0003059,2.99e-10,71;UBERON:0007282,2.99e-10,71;UBERON:0004290,2.99e-10,71;UBERON:0009618,2.99e-10,71;UBERON:0003077,5.83e-10,72;UBERON:0007285,5.83e-10,72;UBERON:0007503,4.92e-09,78;UBERON:0000486,1.42e-08,83;UBERON:0003688,3.01e-08,6;UBERON:0002358,3.01e-08,6;UBERON:0003684,3.01e-08,6;UBERON:0001178,3.01e-08,6;UBERON:0005256,6.38e-08,122;UBERON:0003104,1.70e-07,160;UBERON:0009142,1.70e-07,160 | |||
|phase1_expression=4.90531624030503,10.7050261945492,7.89344662937438,7.00513088471913,13.4088328328186,8.72338524100369,0,0,0.261185628199839,0.491467873003018,0,0,1.84636884759917,0.618831764800233,1.32558950291166,1.34465029290355,0.602694528023977,0,0.975865597581014,1.35433163884467,3.4680117511523,3.44800193625897,0.85870796139317,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,3.97583067623023,4.51204119572301,2.75208386025565,0.795285947051099,6.32625331393427,0.283604451492204,2.66075276955077,1.66886092816939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4000744059455,4.68532893158945,1.45650098894541,18.3575437279241,2.83734705758686,2.24271040056923,3.20246987189115,7.15335890409764,1.8672662123986,1.75123873690594,1.14423332179421,3.78393569112329,2.88087962239999,0.468642863667593,0,0.570471821544449,0.149448680551801,0.704606991862589,1.13311061057692,0.140450806702248,0.204154171254893,0.245668634623536,0.516628905878827,15.4440371446667,20.0286212715631,0.910161361938026,2.87447256726495,0,0.625592599359821,0,2.63386572528503,11.3400484445637,9.76547382892879,1.92834711372036,1.79389635688862,5.97960688691989,5.08636562782948,8.10245959427886,3.81294358182224,4.3798891807757,2.60563598864226,5.73839529620305,3.41029518064195,4.03894038790583,2.94559675655358,3.39456719319505,2.13005755509969,1.30977727695932,0.67824236924195,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,1.92972281457866,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0.38474715694639,0,2.80483547606892,4.115740113314,7.3504355692771,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.821860859650752,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.672786506072164,1.30788020649984,0.51336800074665,4.00742318849111,7.15312891703765,4.22651376278,3.45719551560332,6.24044621468197,1.02882949704857,1.41849132023278,1.5985330740966,4.43231780340257,10.3098105024374,1.64648067356154,1.30294473717494,4.26470338491055,0.791951872933429,0.301439377059586,0,0.499864955910285,0,0,0,4.79249710983165,1.14861935834114,0,1.88215698667853,1.2328579353023,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,1.10422342547226,2.00068208423871,0.271265023699736,19.3412901223651,18.0213278685133,12.4584907876808,5.15422225967938,2.40756879782175,9.09630016223939,1.03473071292505,2.65690239414175,7.37476674166813,1.99832313276591,4.50342662164303,8.92172901908225,0,0,0,0.606255142892519,9.98612637062982,5.74541557326393,9.17998888929474,5.98501695823444,30.8726103876381,13.1983323733372,6.65219423786715,18.4982009315149,4.45254199334973,1.3878872442239,4.08391968220192,0.410635780069046,0.519254429183621,2.67283870457906,0,0.200506470303285,0,2.87036120411517,2.73136752010076,6.29397191805236,0,0,0,0,0,0,0,0,0,0,2.00675909541941,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,1.19040304263846,0.165018999841176,0,0,1.6068392984416,0.290012154876366,1.07834031980251,1.84204409671355,1.7918754422989,1.50388342815583,2.46528379654188,1.27839941124151,4.62966585363034,0.330569830721956,0.960950336825531,0,0,0,7.24068397710472,0,0,0.532306030317022,0,0.37064843820784,0.858749320451947,1.116475108079,1.2655176988749,4.5751246541718,1.02359116524534,1.71175595213568,1.90921948755562,1.56989728039846,2.69808686374972,3.56898138656871,3.76999687506197,0.202182481573316,3.17020642346017,2.10629228119491,2.92580243453754,1.21856744815642,3.16950440270266,2.72999822815972,9.61556937285247,6.78048699721457,1.65409603063837,0,1.75380354101505,1.15755106853338,1.9676842561399,0.405820753925408,2.78841148289775,1.69017361519345,0.717056761020258,1.8667317792493,0,0.354761064070598,2.74439925886963,3.62224382255892,0.379473173765715,1.74967360122491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,6.22079175323615,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38510465306835,0,0,0,0.108647371922008,0,3.29751336246704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,12.0386647094818,0,0,0,0,0,2.41981432097328,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0.0821154570532092,0.0969890164884194,0,4.74559555639118,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72741985561953,0,1.39641200636127,0.458320848023367,0,0.199679000498991,0,0,0.268733889946905,5.04419836959365,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.5085370753095,2.71499800876856,1.72844298240254,2.28611152076586,0,0,1.5334921960688,0,0,1.32506888912221,0,0,0,0,0,0.31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|phase1_expression=4.90531624030503,10.7050261945492,7.89344662937438,7.00513088471913,13.4088328328186,8.72338524100369,0,0,0.261185628199839,0.491467873003018,0,0,1.84636884759917,0.618831764800233,1.32558950291166,1.34465029290355,0.602694528023977,0,0.975865597581014,1.35433163884467,3.4680117511523,3.44800193625897,0.85870796139317,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,3.97583067623023,4.51204119572301,2.75208386025565,0.795285947051099,6.32625331393427,0.283604451492204,2.66075276955077,1.66886092816939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4000744059455,4.68532893158945,1.45650098894541,18.3575437279241,2.83734705758686,2.24271040056923,3.20246987189115,7.15335890409764,1.8672662123986,1.75123873690594,1.14423332179421,3.78393569112329,2.88087962239999,0.468642863667593,0,0.570471821544449,0.149448680551801,0.704606991862589,1.13311061057692,0.140450806702248,0.204154171254893,0.245668634623536,0.516628905878827,15.4440371446667,20.0286212715631,0.910161361938026,2.87447256726495,0,0.625592599359821,0,2.63386572528503,11.3400484445637,9.76547382892879,1.92834711372036,1.79389635688862,5.97960688691989,5.08636562782948,8.10245959427886,3.81294358182224,4.3798891807757,2.60563598864226,5.73839529620305,3.41029518064195,4.03894038790583,2.94559675655358,3.39456719319505,2.13005755509969,1.30977727695932,0.67824236924195,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,1.92972281457866,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0.38474715694639,0,2.80483547606892,4.115740113314,7.3504355692771,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.821860859650752,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.672786506072164,1.30788020649984,0.51336800074665,4.00742318849111,7.15312891703765,4.22651376278,3.45719551560332,6.24044621468197,1.02882949704857,1.41849132023278,1.5985330740966,4.43231780340257,10.3098105024374,1.64648067356154,1.30294473717494,4.26470338491055,0.791951872933429,0.301439377059586,0,0.499864955910285,0,0,0,4.79249710983165,1.14861935834114,0,1.88215698667853,1.2328579353023,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,1.10422342547226,2.00068208423871,0.271265023699736,19.3412901223651,18.0213278685133,12.4584907876808,5.15422225967938,2.40756879782175,9.09630016223939,1.03473071292505,2.65690239414175,7.37476674166813,1.99832313276591,4.50342662164303,8.92172901908225,0,0,0,0.606255142892519,9.98612637062982,5.74541557326393,9.17998888929474,5.98501695823444,30.8726103876381,13.1983323733372,6.65219423786715,18.4982009315149,4.45254199334973,1.3878872442239,4.08391968220192,0.410635780069046,0.519254429183621,2.67283870457906,0,0.200506470303285,0,2.87036120411517,2.73136752010076,6.29397191805236,0,0,0,0,0,0,0,0,0,0,2.00675909541941,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,1.19040304263846,0.165018999841176,0,0,1.6068392984416,0.290012154876366,1.07834031980251,1.84204409671355,1.7918754422989,1.50388342815583,2.46528379654188,1.27839941124151,4.62966585363034,0.330569830721956,0.960950336825531,0,0,0,7.24068397710472,0,0,0.532306030317022,0,0.37064843820784,0.858749320451947,1.116475108079,1.2655176988749,4.5751246541718,1.02359116524534,1.71175595213568,1.90921948755562,1.56989728039846,2.69808686374972,3.56898138656871,3.76999687506197,0.202182481573316,3.17020642346017,2.10629228119491,2.92580243453754,1.21856744815642,3.16950440270266,2.72999822815972,9.61556937285247,6.78048699721457,1.65409603063837,0,1.75380354101505,1.15755106853338,1.9676842561399,0.405820753925408,2.78841148289775,1.69017361519345,0.717056761020258,1.8667317792493,0,0.354761064070598,2.74439925886963,3.62224382255892,0.379473173765715,1.74967360122491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,6.22079175323615,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38510465306835,0,0,0,0.108647371922008,0,3.29751336246704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,12.0386647094818,0,0,0,0,0,2.41981432097328,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0.0821154570532092,0.0969890164884194,0,4.74559555639118,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72741985561953,0,1.39641200636127,0.458320848023367,0,0.199679000498991,0,0,0.268733889946905,5.04419836959365,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.5085370753095,2.71499800876856,1.72844298240254,2.28611152076586,0,0,1.5334921960688,0,0,1.32506888912221,0,0,0,0,0,0.31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| ||
|short_description=p@chr17:48275117..48275151,- | |||
}} | }} |
Latest revision as of 18:38, 25 July 2015
Short description: | p@chr17:48275117..48275151, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48275117..48275151, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.95e-22 | 76 |
multi fate stem cell | 3.11e-17 | 427 |
somatic stem cell | 2.00e-16 | 433 |
stem cell | 2.18e-15 | 441 |
connective tissue cell | 5.74e-11 | 361 |
muscle precursor cell | 3.05e-10 | 58 |
myoblast | 3.05e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.05e-10 | 58 |
muscle cell | 8.82e-10 | 55 |
mesenchymal cell | 1.20e-09 | 354 |
preadipocyte | 1.44e-08 | 12 |
smooth muscle cell | 1.75e-08 | 43 |
smooth muscle myoblast | 1.75e-08 | 43 |
mesenchymal stem cell of adipose | 4.27e-08 | 8 |
electrically responsive cell | 5.73e-08 | 61 |
electrically active cell | 5.73e-08 | 61 |
motile cell | 6.99e-08 | 386 |
stromal cell | 2.32e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.93e-11 | 371 |
skeletal muscle tissue | 5.42e-11 | 62 |
striated muscle tissue | 5.42e-11 | 62 |
myotome | 5.42e-11 | 62 |
dense mesenchyme tissue | 1.28e-10 | 73 |
muscle tissue | 2.49e-10 | 64 |
musculature | 2.49e-10 | 64 |
musculature of body | 2.49e-10 | 64 |
somite | 2.99e-10 | 71 |
presomitic mesoderm | 2.99e-10 | 71 |
presumptive segmental plate | 2.99e-10 | 71 |
dermomyotome | 2.99e-10 | 71 |
trunk paraxial mesoderm | 2.99e-10 | 71 |
paraxial mesoderm | 5.83e-10 | 72 |
presumptive paraxial mesoderm | 5.83e-10 | 72 |
epithelial vesicle | 4.92e-09 | 78 |
multilaminar epithelium | 1.42e-08 | 83 |
omentum | 3.01e-08 | 6 |
peritoneum | 3.01e-08 | 6 |
abdominal cavity | 3.01e-08 | 6 |
visceral peritoneum | 3.01e-08 | 6 |
trunk mesenchyme | 6.38e-08 | 122 |
mesenchyme | 1.70e-07 | 160 |
entire embryonic mesenchyme | 1.70e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.72e-07 | 14 |