FFCP PHASE1:Hg19::chr18:29175113..29175118,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:29175113..29175118,+ | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_at_chr18:29175113..29175118,+ | |||
|id=chr18:29175113..29175118,+ | |||
|ontology_enrichment_celltype=CL:0002195!9.02e-07!2;CL:0002571!9.02e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!3.07e-34!3;UBERON:0005290!3.07e-34!3;UBERON:0010096!3.07e-34!3;UBERON:0002107!1.13e-14!19;UBERON:0006925!1.13e-14!19;UBERON:0008836!1.13e-14!19;UBERON:0002298!2.95e-13!8;UBERON:0008835!1.15e-12!22;UBERON:0003894!1.15e-12!22;UBERON:0002336!1.96e-12!1;UBERON:0001018!1.96e-12!1;UBERON:0002473!1.96e-12!1;UBERON:0005340!1.96e-12!1;UBERON:0002316!1.96e-12!1;UBERON:0003544!1.96e-12!1;UBERON:0001020!1.96e-12!1;UBERON:0005970!1.96e-12!1;UBERON:0002437!1.96e-12!1;UBERON:0009854!4.12e-12!23;UBERON:0002368!3.64e-11!35;UBERON:0007499!3.90e-11!25;UBERON:0009497!3.90e-11!25;UBERON:0000015!3.90e-11!25;UBERON:0002423!3.90e-11!25;UBERON:0006235!3.90e-11!25;UBERON:0004161!3.90e-11!25;UBERON:0005057!1.05e-10!26;UBERON:0009856!1.05e-10!26;UBERON:0001017!1.49e-09!82;UBERON:0005743!4.56e-09!86;UBERON:0000955!4.62e-09!69;UBERON:0006238!4.62e-09!69;UBERON:0004733!5.10e-09!12;UBERON:0002028!5.10e-09!12;UBERON:0007277!5.10e-09!12;UBERON:0002365!5.85e-09!31;UBERON:0002330!5.85e-09!31;UBERON:0001049!1.00e-08!57;UBERON:0005068!1.00e-08!57;UBERON:0006241!1.00e-08!57;UBERON:0007135!1.00e-08!57;UBERON:0000949!1.35e-08!45;UBERON:0002616!2.06e-08!59;UBERON:0004732!2.30e-08!13;UBERON:0007023!2.68e-08!115;UBERON:0000073!4.04e-08!94;UBERON:0001016!4.04e-08!94;UBERON:0003076!2.59e-07!15;UBERON:0003057!2.59e-07!15;UBERON:0003075!2.80e-07!86;UBERON:0007284!2.80e-07!86;UBERON:0003929!4.83e-07!54;UBERON:0002360!5.41e-07!2;UBERON:0000094!5.41e-07!2;UBERON:0007645!5.41e-07!2;UBERON:0001905!6.07e-07!2;UBERON:0002757!6.07e-07!2;UBERON:0010134!6.07e-07!2;UBERON:0002784!6.07e-07!2;UBERON:0005408!6.07e-07!2;UBERON:0001899!6.07e-07!2;UBERON:0002346!6.43e-07!90;UBERON:0005162!7.61e-07!2;UBERON:0000122!7.61e-07!2;UBERON:0001954!9.54e-07!2;UBERON:0003022!9.54e-07!2;UBERON:0002421!9.54e-07!2;UBERON:0002600!9.54e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;8.73e-45;3!UBERON:0005290;8.73e-45;3!UBERON:0002298;5.13e-23;6!UBERON:0001905;9.86e-18;2!UBERON:0002360;9.86e-18;2!UBERON:0002757;9.86e-18;2!UBERON:0010134;9.86e-18;2!UBERON:0000094;9.86e-18;2!UBERON:0005408;9.86e-18;2!UBERON:0001899;9.86e-18;2!UBERON:0010743;9.86e-18;2!UBERON:0004733;4.67e-12;12!UBERON:0002028;4.67e-12;12!UBERON:0004732;3.30e-11;13!UBERON:0002368;3.95e-10;33!UBERON:0003296;1.50e-09;4!UBERON:0010133;1.50e-09;4!UBERON:0002784;1.50e-09;4!UBERON:0002107;5.83e-08;19!UBERON:0006925;5.83e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.25e-45,3;UBERON:0005290,6.25e-45,3;UBERON:0010096,6.25e-45,3;UBERON:0002298,4.34e-23,6;UBERON:0002360,9.07e-18,2;UBERON:0000094,9.07e-18,2;UBERON:0010743,9.07e-18,2;UBERON:0001905,1.27e-17,2;UBERON:0002757,1.27e-17,2;UBERON:0010134,1.27e-17,2;UBERON:0005408,1.27e-17,2;UBERON:0001899,1.27e-17,2;UBERON:0004733,4.30e-12,12;UBERON:0002028,4.30e-12,12;UBERON:0007277,4.30e-12,12;UBERON:0004732,3.05e-11,13;UBERON:0003076,7.09e-10,15;UBERON:0003057,7.09e-10,15;UBERON:0003296,1.70e-09,4;UBERON:0010133,1.70e-09,4;UBERON:0002784,1.70e-09,4;UBERON:0002368,3.24e-09,35;UBERON:0002107,5.94e-08,19;UBERON:0006925,5.94e-08,19;UBERON:0008836,5.94e-08,19;UBERON:0000949,2.55e-07,45;UBERON:0008835,5.40e-07,22;UBERON:0003894,5.40e-07,22;UBERON:0001017,6.53e-07,81;UBERON:0009854,9.95e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45431954397093,1.88579387612649,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:29175113..29175118,+ | |||
}} |
Latest revision as of 00:21, 26 July 2015
Short description: | p@chr18:29175113..29175118, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:29175113..29175118, + |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 6.25e-45 | 3 |
myelencephalon | 6.25e-45 | 3 |
future myelencephalon | 6.25e-45 | 3 |
brainstem | 4.34e-23 | 6 |
meninx | 9.07e-18 | 2 |
membrane organ | 9.07e-18 | 2 |
meningeal cluster | 9.07e-18 | 2 |
pineal body | 1.27e-17 | 2 |
regional part of epithalamus | 1.27e-17 | 2 |
secretory circumventricular organ | 1.27e-17 | 2 |
circumventricular organ | 1.27e-17 | 2 |
epithalamus | 1.27e-17 | 2 |
segmental subdivision of hindbrain | 4.30e-12 | 12 |
hindbrain | 4.30e-12 | 12 |
presumptive hindbrain | 4.30e-12 | 12 |
segmental subdivision of nervous system | 3.05e-11 | 13 |
posterior neural tube | 7.09e-10 | 15 |
chordal neural plate | 7.09e-10 | 15 |
gland of diencephalon | 1.70e-09 | 4 |
neuroendocrine gland | 1.70e-09 | 4 |
regional part of diencephalon | 1.70e-09 | 4 |
endocrine gland | 3.24e-09 | 35 |
liver | 5.94e-08 | 19 |
digestive gland | 5.94e-08 | 19 |
liver bud | 5.94e-08 | 19 |
endocrine system | 2.55e-07 | 45 |
hepatic diverticulum | 5.40e-07 | 22 |
liver primordium | 5.40e-07 | 22 |
central nervous system | 6.53e-07 | 81 |
digestive tract diverticulum | 9.95e-07 | 23 |