FFCP PHASE1:Hg19::chr1:156510877..156510889,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:156510877..156510889,- | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_at_chr1:156510877..156510889,- | |description=CAGE_peak_at_chr1:156510877..156510889,- | ||
|id=chr1:156510877..156510889,- | |id=chr1:156510877..156510889,- | ||
|ontology_enrichment_celltype=CL:0002009!4.46e-22!65;CL:0000557!8.54e-20!71;CL:0002194!2.76e-18!63;CL:0000576!2.76e-18!63;CL:0000040!2.76e-18!63;CL:0000559!2.76e-18!63;CL:0000840!2.64e-17!5;CL:0001029!2.64e-17!5;CL:0000839!5.10e-16!70;CL:0000766!2.08e-14!76;CL:0000990!2.00e-11!8;CL:0000763!9.54e-11!112;CL:0000049!9.54e-11!112;CL:0000235!1.23e-10!10;CL:0001014!1.74e-09!2;CL:0001016!1.74e-09!2;CL:0000451!2.79e-09!10;CL:0002031!3.04e-09!124;CL:0002087!1.18e-07!119;CL:0000738!1.19e-07!140;CL:0002057!1.50e-07!42;CL:0000860!6.36e-07!45 | |ontology_enrichment_celltype=CL:0002009!4.46e-22!65;CL:0000557!8.54e-20!71;CL:0002194!2.76e-18!63;CL:0000576!2.76e-18!63;CL:0000040!2.76e-18!63;CL:0000559!2.76e-18!63;CL:0000840!2.64e-17!5;CL:0001029!2.64e-17!5;CL:0000839!5.10e-16!70;CL:0000766!2.08e-14!76;CL:0000990!2.00e-11!8;CL:0000763!9.54e-11!112;CL:0000049!9.54e-11!112;CL:0000235!1.23e-10!10;CL:0001014!1.74e-09!2;CL:0001016!1.74e-09!2;CL:0000451!2.79e-09!10;CL:0002031!3.04e-09!124;CL:0002087!1.18e-07!119;CL:0000738!1.19e-07!140;CL:0002057!1.50e-07!42;CL:0000860!6.36e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000235;7.31e-83;6!CL:0000840;3.97e-14;5!CL:0000473;2.42e-11;39!CL:0000234;2.42e-11;39!CL:0001014;3.89e-11;2!CL:0002593;3.89e-11;2!CL:0001016;3.89e-11;2!CL:0000990;9.65e-10;8!CL:0000451;3.90e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,7.96e-83,6;CL:0002009,1.48e-15,61;CL:0000840,3.48e-14,5;CL:0001029,3.48e-14,5;CL:0000557,3.63e-14,67;CL:0002194,6.04e-12,59;CL:0000576,6.04e-12,59;CL:0000040,6.04e-12,59;CL:0000559,6.04e-12,59;CL:0001014,3.35e-11,2;CL:0001016,3.35e-11,2;CL:0002593,4.52e-11,2;CL:0000839,1.09e-10,66;CL:0000473,1.42e-10,48;CL:0000234,1.42e-10,48;CL:0000766,8.43e-10,72;CL:0000990,8.84e-10,8;CL:0000763,9.72e-09,108;CL:0000049,9.72e-09,108;CL:0000451,3.63e-08,10;CL:0002031,7.71e-08,120;CL:0000738,6.99e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.20e-17!80;UBERON:0001474!1.77e-15!86;UBERON:0002193!1.54e-14!112;UBERON:0002405!5.18e-14!115;UBERON:0002390!1.34e-13!102;UBERON:0003061!1.34e-13!102;UBERON:0004765!1.90e-12!101;UBERON:0001434!1.90e-12!101;UBERON:0002360!9.04e-09!2;UBERON:0000094!9.04e-09!2;UBERON:0007645!9.04e-09!2;UBERON:0002204!4.29e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!5.20e-17!80;UBERON:0001474!1.77e-15!86;UBERON:0002193!1.54e-14!112;UBERON:0002405!5.18e-14!115;UBERON:0002390!1.34e-13!102;UBERON:0003061!1.34e-13!102;UBERON:0004765!1.90e-12!101;UBERON:0001434!1.90e-12!101;UBERON:0002360!9.04e-09!2;UBERON:0000094!9.04e-09!2;UBERON:0007645!9.04e-09!2;UBERON:0002204!4.29e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.89e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-12,76;UBERON:0001474,1.45e-11,82;UBERON:0002456,4.52e-11,2;UBERON:0004765,1.59e-10,90;UBERON:0002405,3.51e-10,93;UBERON:0002390,1.19e-09,98;UBERON:0003061,1.19e-09,98;UBERON:0001434,1.87e-09,100;UBERON:0002204,3.78e-09,167;UBERON:0002193,9.72e-09,108;UBERON:0003081,1.95e-07,203 | |||
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| ||
|short_description=p@chr1:156510877..156510889,- | |short_description=p@chr1:156510877..156510889,- | ||
}} | }} |
Latest revision as of 22:38, 27 July 2015
Short description: | p@chr1:156510877..156510889, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:156510877..156510889, - |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 7.96e-83 | 6 |
macrophage dendritic cell progenitor | 1.48e-15 | 61 |
immature conventional dendritic cell | 3.48e-14 | 5 |
common dendritic progenitor | 3.48e-14 | 5 |
granulocyte monocyte progenitor cell | 3.63e-14 | 67 |
monopoietic cell | 6.04e-12 | 59 |
monocyte | 6.04e-12 | 59 |
monoblast | 6.04e-12 | 59 |
promonocyte | 6.04e-12 | 59 |
CD1a-positive Langerhans cell | 3.35e-11 | 2 |
immature CD1a-positive Langerhans cell | 3.35e-11 | 2 |
smooth muscle cell of the internal thoracic artery | 4.52e-11 | 2 |
myeloid lineage restricted progenitor cell | 1.09e-10 | 66 |
defensive cell | 1.42e-10 | 48 |
phagocyte | 1.42e-10 | 48 |
myeloid leukocyte | 8.43e-10 | 72 |
conventional dendritic cell | 8.84e-10 | 8 |
myeloid cell | 9.72e-09 | 108 |
common myeloid progenitor | 9.72e-09 | 108 |
dendritic cell | 3.63e-08 | 10 |
hematopoietic lineage restricted progenitor cell | 7.71e-08 | 120 |
leukocyte | 6.99e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.74e-12 | 76 |
bone element | 1.45e-11 | 82 |
internal thoracic artery | 4.52e-11 | 2 |
skeletal element | 1.59e-10 | 90 |
immune system | 3.51e-10 | 93 |
hematopoietic system | 1.19e-09 | 98 |
blood island | 1.19e-09 | 98 |
skeletal system | 1.87e-09 | 100 |
musculoskeletal system | 3.78e-09 | 167 |
hemolymphoid system | 9.72e-09 | 108 |
lateral plate mesoderm | 1.95e-07 | 203 |