FFCP PHASE1:Hg19::chr5:156486149..156486170,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26762 | |EntrezGene=26762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17866 | |HGNC=17866 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFX0 | |UniProt=E9PFX0 | ||
|association_with_transcript=-19bp_to_ENST00000522693,uc011ddm.1_5end | |association_with_transcript=-19bp_to_ENST00000522693,uc011ddm.1_5end | ||
|cluster_id=chr5:156486149..156486170,- | |||
|description=CAGE_peak_2_at_HAVCR1_5end | |description=CAGE_peak_2_at_HAVCR1_5end | ||
|id=chr5:156486149..156486170,- | |id=chr5:156486149..156486170,- | ||
|ontology_enrichment_celltype=CL:1000507!1.83e-26!12;CL:1000494!1.83e-26!12;CL:1000497!2.40e-21!18;CL:0002518!2.40e-21!18;CL:1000449!1.93e-19!16;CL:0002681!1.27e-14!13;CL:0002584!1.27e-14!13;CL:0000239!2.98e-13!3;CL:1000615!2.98e-13!3;CL:0002306!2.98e-13!3;CL:0000066!2.81e-11!254;CL:0002322!6.96e-08!5 | |ontology_enrichment_celltype=CL:1000507!1.83e-26!12;CL:1000494!1.83e-26!12;CL:1000497!2.40e-21!18;CL:0002518!2.40e-21!18;CL:1000449!1.93e-19!16;CL:0002681!1.27e-14!13;CL:0002584!1.27e-14!13;CL:0000239!2.98e-13!3;CL:1000615!2.98e-13!3;CL:0002306!2.98e-13!3;CL:0000066!2.81e-11!254;CL:0002322!6.96e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.21e-24;10!CL:1000494;1.21e-24;10!CL:1000497;1.60e-19;17!CL:0002518;1.60e-19;17!CL:1000449;2.72e-16;15!CL:0000239;2.88e-10;3!CL:1000615;2.88e-10;3!CL:0002306;2.88e-10;3!CL:0002681;1.80e-09;12!CL:0002584;1.80e-09;12!CL:0000313;8.46e-09;1!CL:0002563;2.02e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.19e-24,10;CL:1000494,1.19e-24,10;CL:1000497,1.58e-19,17;CL:0002518,1.58e-19,17;CL:1000449,2.68e-16,15;CL:0000239,2.62e-10,3;CL:1000615,2.62e-10,3;CL:0002306,2.62e-10,3;CL:0000066,1.05e-09,253;CL:0002681,1.80e-09,12;CL:0002584,1.80e-09,12;CL:0000313,8.78e-09,1;CL:0002563,1.98e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.36e-14;31!UBERON:0009497;1.29e-13;13!UBERON:0004161;1.42e-10;11!UBERON:0005425;3.53e-08;1!UBERON:0001041;4.11e-08;30!UBERON:0003918;4.85e-07;10!UBERON:0007687;4.85e-07;10 | |||
|ontology_enrichment_disease=DOID:299!5.48e-12!25;DOID:4468!4.37e-10!2;DOID:305!1.00e-09!106;DOID:0050687!4.92e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;5.99e-16;2!DOID:2152;8.46e-09;1!DOID:299;3.64e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.56e-16,2;DOID:2152,8.78e-09,1;DOID:305,1.07e-07,106;DOID:299,3.57e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.83e-26!12;UBERON:0001231!1.83e-26!12;UBERON:0004810!1.83e-26!12;UBERON:0005172!2.70e-25!55;UBERON:0005173!2.70e-25!55;UBERON:0002417!2.51e-22!61;UBERON:0000916!2.51e-22!61;UBERON:0002113!7.72e-20!27;UBERON:0003918!7.72e-20!27;UBERON:0005095!7.72e-20!27;UBERON:0007687!7.72e-20!27;UBERON:0004211!1.93e-19!16;UBERON:0001285!1.93e-19!16;UBERON:0007684!1.93e-19!16;UBERON:0003220!1.93e-19!16;UBERON:0004208!1.93e-19!16;UBERON:0006555!3.35e-18!17;UBERON:0005103!3.35e-18!17;UBERON:0000083!3.35e-18!17;UBERON:0009201!3.35e-18!17;UBERON:0004819!3.35e-18!17;UBERON:0006553!3.35e-18!17;UBERON:0003074!3.35e-18!17;UBERON:0003060!3.35e-18!17;UBERON:0000080!4.24e-17!18;UBERON:0002120!4.24e-17!18;UBERON:0004875!4.24e-17!18;UBERON:0005721!4.24e-17!18;UBERON:0005754!4.24e-17!18;UBERON:0007297!4.24e-17!18;UBERON:0000489!2.49e-16!32;UBERON:0006554!1.73e-15!44;UBERON:0004876!3.17e-15!20;UBERON:0001008!4.49e-15!45;UBERON:0001851!4.70e-15!16;UBERON:0001225!1.27e-14!13;UBERON:0008987!1.27e-14!13;UBERON:0003887!2.01e-14!21;UBERON:0000058!3.92e-14!26;UBERON:0003064!1.80e-13!37;UBERON:0005177!2.19e-13!107;UBERON:0006853!2.98e-13!3;UBERON:0007685!2.98e-13!3;UBERON:0004134!2.98e-13!3;UBERON:0001155!1.31e-11!9;UBERON:0009569!3.71e-11!113;UBERON:0000353!5.89e-11!17;UBERON:0009854!2.11e-10!23;UBERON:0000160!2.21e-10!27;UBERON:0005409!1.53e-09!35;UBERON:0000059!1.93e-09!11;UBERON:0009497!2.06e-09!25;UBERON:0000015!2.06e-09!25;UBERON:0002423!2.06e-09!25;UBERON:0006235!2.06e-09!25;UBERON:0004161!2.06e-09!25;UBERON:0009856!4.73e-09!26;UBERON:0003929!1.07e-08!54;UBERON:0008835!1.79e-08!22;UBERON:0003894!1.79e-08!22;UBERON:0000466!1.98e-08!126;UBERON:0004921!4.66e-08!129;UBERON:0004185!4.66e-08!129;UBERON:0002107!2.33e-07!19;UBERON:0006925!2.33e-07!19;UBERON:0008836!2.33e-07!19;UBERON:0007499!2.44e-07!25;UBERON:0003104!4.11e-07!238;UBERON:0009142!4.11e-07!238;UBERON:0003886!6.68e-07!63;UBERON:0005256!7.40e-07!143;UBERON:0001007!8.97e-07!155;UBERON:0001555!8.97e-07!155;UBERON:0007026!8.97e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.21e-24;10!UBERON:0009773;1.21e-24;10!UBERON:0001231;1.21e-24;10!UBERON:0004810;1.21e-24;10!UBERON:0002113;2.15e-22;24!UBERON:0011143;2.15e-22;24!UBERON:0000489;2.66e-18;29!UBERON:0006554;1.20e-17;30!UBERON:0001008;1.20e-17;30!UBERON:0006555;2.72e-16;15!UBERON:0004819;2.72e-16;15!UBERON:0001285;2.72e-16;15!UBERON:0007684;2.72e-16;15!UBERON:0005172;6.27e-13;52!UBERON:0005173;6.27e-13;52!UBERON:0002417;2.34e-10;58!UBERON:0000916;2.34e-10;58!UBERON:0006853;2.88e-10;3!UBERON:0007685;2.88e-10;3!UBERON:0004134;2.88e-10;3!UBERON:0001225;1.80e-09;12!UBERON:0008987;1.80e-09;12!UBERON:0004911;8.46e-09;1!UBERON:0001242;2.02e-08;4!UBERON:0001262;2.02e-08;4!UBERON:0004786;2.02e-08;4!UBERON:0004808;2.02e-08;4!UBERON:0001277;2.02e-08;4!UBERON:0000941;3.53e-08;1!UBERON:0001785;3.53e-08;1!UBERON:0002464;3.53e-08;1!UBERON:0004904;3.53e-08;1!UBERON:0001021;3.53e-08;1!UBERON:0001155;7.77e-08;9!UBERON:0001851;1.33e-07;15!UBERON:0000353;1.33e-07;15!UBERON:0002423;5.50e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.19e-24,10;UBERON:0002113,1.42e-20,26;UBERON:0003918,1.42e-20,26;UBERON:0011143,1.42e-20,26;UBERON:0005095,1.42e-20,26;UBERON:0007687,1.42e-20,26;UBERON:0005172,1.19e-19,54;UBERON:0005173,1.19e-19,54;UBERON:0002417,1.90e-17,60;UBERON:0000916,1.90e-17,60;UBERON:0000489,4.87e-17,31;UBERON:0004211,2.68e-16,15;UBERON:0009773,2.68e-16,15;UBERON:0001231,2.68e-16,15;UBERON:0001285,2.68e-16,15;UBERON:0007684,2.68e-16,15;UBERON:0004208,2.68e-16,15;UBERON:0006555,2.98e-15,16;UBERON:0004819,2.98e-15,16;UBERON:0006554,1.90e-13,47;UBERON:0001008,3.92e-13,48;UBERON:0005177,4.54e-11,101;UBERON:0006853,2.62e-10,3;UBERON:0007685,2.62e-10,3;UBERON:0004134,2.62e-10,3;UBERON:0009569,9.98e-10,112;UBERON:0001225,1.80e-09,12;UBERON:0008987,1.80e-09,12;UBERON:0004911,8.78e-09,1;UBERON:0001242,1.98e-08,4;UBERON:0001262,1.98e-08,4;UBERON:0004786,1.98e-08,4;UBERON:0004808,1.98e-08,4;UBERON:0001277,1.98e-08,4;UBERON:0003104,2.46e-08,160;UBERON:0009142,2.46e-08,160;UBERON:0000941,3.53e-08,1;UBERON:0001785,3.53e-08,1;UBERON:0002464,3.53e-08,1;UBERON:0004904,3.53e-08,1;UBERON:0001021,3.53e-08,1;UBERON:0003902,3.53e-08,1;UBERON:0005425,3.53e-08,1;UBERON:0008835,5.77e-08,22;UBERON:0003894,5.77e-08,22;UBERON:0001155,7.41e-08,9;UBERON:0009854,1.31e-07,23;UBERON:0001851,1.33e-07,15;UBERON:0000353,1.33e-07,15;UBERON:0003929,1.64e-07,54;UBERON:0003103,4.96e-07,68;UBERON:0007499,5.54e-07,25;UBERON:0009497,5.54e-07,25;UBERON:0000015,5.54e-07,25;UBERON:0002423,5.54e-07,25;UBERON:0006235,5.54e-07,25;UBERON:0004161,5.54e-07,25 | |||
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|short_description=p2@HAVCR1 | |short_description=p2@HAVCR1 | ||
}} | }} |
Latest revision as of 13:11, 16 September 2015
Short description: | p2@HAVCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HAVCR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000522693, uc011ddm.1_5end |
EntrezGene: | HAVCR1 |
HGNC: | 17866 |
UniProt: | E9PFX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.19e-24 | 10 |
nephron tubule epithelial cell | 1.19e-24 | 10 |
kidney cell | 1.58e-19 | 17 |
kidney epithelial cell | 1.58e-19 | 17 |
epithelial cell of nephron | 2.68e-16 | 15 |
brush border epithelial cell | 2.62e-10 | 3 |
kidney cortex tubule cell | 2.62e-10 | 3 |
epithelial cell of proximal tubule | 2.62e-10 | 3 |
epithelial cell | 1.05e-09 | 253 |
kidney cortical cell | 1.80e-09 | 12 |
renal cortical epithelial cell | 1.80e-09 | 12 |
serous secreting cell | 8.78e-09 | 1 |
intestinal epithelial cell | 1.98e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.56e-16 | 2 |
ovary epithelial cancer | 8.78e-09 | 1 |
carcinoma | 1.07e-07 | 106 |
adenocarcinoma | 3.57e-07 | 25 |