FFCP PHASE1:Hg19::chr7:98809410..98809436,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:98809410..98809436,- | |||
|description=CAGE_peak_at_chr7:98809410..98809436,- | |description=CAGE_peak_at_chr7:98809410..98809436,- | ||
|id=chr7:98809410..98809436,- | |id=chr7:98809410..98809436,- | ||
|ontology_enrichment_celltype=CL:0000066!5.54e-28!254;CL:0000223!2.10e-25!59;CL:0002076!1.90e-23!43;CL:0002368!3.76e-13!13;CL:0002251!2.67e-10!21;CL:0002621!4.28e-08!3 | |ontology_enrichment_celltype=CL:0000066!5.54e-28!254;CL:0000223!2.10e-25!59;CL:0002076!1.90e-23!43;CL:0002368!3.76e-13!13;CL:0002251!2.67e-10!21;CL:0002621!4.28e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002621;7.73e-25;3!CL:0002368;1.93e-15;13!CL:0002202;1.74e-14;9!CL:0002632;1.74e-14;9!CL:0002076;7.00e-14;42!CL:0000307;1.01e-11;3!CL:0000244;8.88e-09;4!CL:0000731;8.88e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,8.75e-25,3;CL:0002076,2.00e-17,42;CL:0002368,2.12e-15,13;CL:0000223,7.77e-15,58;CL:0002202,1.90e-14,9;CL:0002632,1.90e-14,9;CL:0000066,1.07e-11,253;CL:0000068,1.29e-11,3;CL:0000069,1.29e-11,3;CL:0000307,1.29e-11,3;CL:0000377,1.29e-11,3;CL:0000244,8.21e-09,4;CL:0000731,8.21e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.01e-11;3!CL:0000223;1.90e-10;58 | |||
|ontology_enrichment_disease=DOID:305!2.65e-22!106;DOID:0050687!1.66e-14!143;DOID:299!2.32e-14!25;DOID:7!7.29e-10!39;DOID:5093!2.38e-09!4;DOID:1612!2.38e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.69e-09;1!DOID:3603;1.69e-09;1!DOID:5093;2.66e-09;4!DOID:1612;2.66e-09;4!DOID:299;4.58e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.69e-09,1;DOID:3603,1.69e-09,1;DOID:5093,2.66e-09,4;DOID:1612,2.66e-09,4;DOID:299,4.45e-08,25 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001949;7.73e-25;3!UBERON:0000486;1.68e-16;12!UBERON:0004807;1.21e-12;22!UBERON:0002114;7.92e-12;2!UBERON:0005911;1.17e-11;36!UBERON:0003929;5.58e-11;7!UBERON:0004913;7.97e-10;1!UBERON:0003703;7.97e-10;1!UBERON:0001174;7.97e-10;1!UBERON:0004914;7.97e-10;1!UBERON:0003350;1.14e-09;8!UBERON:0001828;1.14e-09;8!UBERON:0007196;9.26e-09;15!UBERON:0001558;9.26e-09;15!UBERON:0002108;1.95e-07;4!UBERON:0000365;3.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,8.75e-25,3;UBERON:0002114,1.10e-11,2;UBERON:0005911,6.21e-10,82;UBERON:0004807,7.64e-10,28;UBERON:0004913,7.98e-10,1;UBERON:0003703,7.98e-10,1;UBERON:0001174,7.98e-10,1;UBERON:0004914,7.98e-10,1;UBERON:0004119,8.92e-10,160;UBERON:0000925,8.92e-10,160;UBERON:0006595,8.92e-10,160;UBERON:0003350,1.19e-09,8;UBERON:0001828,1.19e-09,8;UBERON:0007196,9.75e-09,15;UBERON:0001558,9.75e-09,15;UBERON:0001004,1.85e-07,74;UBERON:0002108,2.36e-07,4;UBERON:0000365,3.24e-07,5;UBERON:0001007,6.39e-07,145;UBERON:0001555,6.39e-07,145;UBERON:0007026,6.39e-07,145;UBERON:0000915,7.91e-07,52 | |||
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| ||
|short_description=p@chr7:98809410..98809436,- | |short_description=p@chr7:98809410..98809436,- | ||
}} | }} |
Latest revision as of 13:08, 31 July 2015
Short description: | p@chr7:98809410..98809436, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:98809410..98809436, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 8.75e-25 | 3 |
endo-epithelial cell | 2.00e-17 | 42 |
respiratory epithelial cell | 2.12e-15 | 13 |
endodermal cell | 7.77e-15 | 58 |
epithelial cell of tracheobronchial tree | 1.90e-14 | 9 |
epithelial cell of lower respiratory tract | 1.90e-14 | 9 |
epithelial cell | 1.07e-11 | 253 |
duct epithelial cell | 1.29e-11 | 3 |
branched duct epithelial cell | 1.29e-11 | 3 |
tracheal epithelial cell | 1.29e-11 | 3 |
tracheoblast | 1.29e-11 | 3 |
transitional epithelial cell | 8.21e-09 | 4 |
urothelial cell | 8.21e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 8.75e-25 | 3 |
duodenum | 1.10e-11 | 2 |
endo-epithelium | 6.21e-10 | 82 |
respiratory system epithelium | 7.64e-10 | 28 |
hepatopancreatic ampulla | 7.98e-10 | 1 |
extrahepatic bile duct | 7.98e-10 | 1 |
common bile duct | 7.98e-10 | 1 |
duodenal papilla | 7.98e-10 | 1 |
endoderm-derived structure | 8.92e-10 | 160 |
endoderm | 8.92e-10 | 160 |
presumptive endoderm | 8.92e-10 | 160 |
epithelium of mucosa | 1.19e-09 | 8 |
gingiva | 1.19e-09 | 8 |
tracheobronchial tree | 9.75e-09 | 15 |
lower respiratory tract | 9.75e-09 | 15 |
respiratory system | 1.85e-07 | 74 |
small intestine | 2.36e-07 | 4 |
urothelium | 3.24e-07 | 5 |
digestive system | 6.39e-07 | 145 |
digestive tract | 6.39e-07 | 145 |
primitive gut | 6.39e-07 | 145 |
thoracic segment of trunk | 7.91e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.69e-09 | 1 |
mucinous cystadenocarcinoma | 1.69e-09 | 1 |
thoracic cancer | 2.66e-09 | 4 |
breast cancer | 2.66e-09 | 4 |
adenocarcinoma | 4.45e-08 | 25 |