FFCP PHASE1:Mm9::chr18:69506715..69506718,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:69506715..69506718,+|id=chr18:69506715..69506718,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.53e-10!75;UBERON:0001016!3.53e-10!75;UBERON:0004121!3.88e-10!102;UBERON:0000924!3.88e-10!102;UBERON:0006601!3.88e-10!102;UBERON:0001017!4.55e-10!73;UBERON:0005743!4.55e-10!73;UBERON:0002346!1.85e-09!71;UBERON:0003075!1.85e-09!71;UBERON:0007284!1.85e-09!71;UBERON:0001049!8.04e-09!52;UBERON:0005068!8.04e-09!52;UBERON:0006241!8.04e-09!52;UBERON:0007135!8.04e-09!52;UBERON:0000468!1.38e-08!333;UBERON:0003056!1.39e-08!49;UBERON:0000955!1.58e-08!50;UBERON:0006238!1.58e-08!50;UBERON:0000033!1.64e-08!63;UBERON:0002616!4.40e-08!49;UBERON:0002020!8.21e-08!34;UBERON:0002791!8.31e-08!29;UBERON:0003528!8.31e-08!29;UBERON:0001893!8.31e-08!29;UBERON:0000956!1.37e-07!21;UBERON:0001869!1.37e-07!21;UBERON:0000203!1.37e-07!21;UBERON:0002780!1.40e-07!39;UBERON:0001890!1.40e-07!39;UBERON:0006240!1.40e-07!39;UBERON:0003080!2.72e-07!40;UBERON:0000922!8.38e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.56e-09,95;UBERON:0000924,1.56e-09,95;UBERON:0006601,1.56e-09,95;UBERON:0002346,4.21e-09,64;UBERON:0003075,4.21e-09,64;UBERON:0007284,4.21e-09,64;UBERON:0001017,4.79e-09,73;UBERON:0001016,5.38e-09,75;UBERON:0010371,3.29e-08,73;UBERON:0010314,4.66e-08,92;UBERON:0000955,5.03e-08,47;UBERON:0006238,5.03e-08,47;UBERON:0003056,6.92e-08,49;UBERON:0001049,7.51e-08,52;UBERON:0005068,7.51e-08,52;UBERON:0006241,7.51e-08,52;UBERON:0007135,7.51e-08,52;UBERON:0003528,1.39e-07,29;UBERON:0002791,1.39e-07,29;UBERON:0001893,1.39e-07,29;UBERON:0002020,1.44e-07,34;UBERON:0002616,1.51e-07,46;UBERON:0000073,1.51e-07,54;UBERON:0000956,1.67e-07,21;UBERON:0001869,1.67e-07,21;UBERON:0000203,1.67e-07,21;UBERON:0010708,6.22e-07,8;UBERON:0002780,6.79e-07,39;UBERON:0001890,6.79e-07,39;UBERON:0006240,6.79e-07,39|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0.473193248037357,1.09691546884591,0.42438965179803,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,6.97680500417429,5.93152693383074,11.2769341463084,1.67983705950435,4.31257693094915,1.34226084846189,0,0.336093799142464,1.28629718017973,3.15186783932632,0.515672092277442,0.809265843438391,1.5869729378161,3.80298842103708,0.338844532069132,2.66788438833342,0,0,0.7104801149461,1.79760066311043,3.84218305321555,17.4198548678242,5.26523159493594,7.99234853135252,0,1.98781686856452,2.44981598429908,4.79227355091182,3.67687514644008,0,1.53224805702225,1.38245879930619,1.31886287730194,0.365950574409639,1.04182674111352,1.95428099300967,2.25105044012672,7.02871939773326,4.71405736757868,2.27794689278565,0.931997229126503,0.681535739998656,2.56943304363071,2.02905142091174,0,0.679971333707751,0,0,0,0,0,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.216491041011214,1.01343946190039,0.505524445014783,0.11418387971906,3.10725460376606,0.29688427812965,1.38788261412909,0.304465478312141,1.38369298353635,1.20578112442098,1.64624189989987,0.502666365318702,0,0.144599356919912,0,1.61766849947409,0.441683036920787,0.484875253135222,0,3.51336956413857,4.1889341362691,0.255457055208591,0.359445373517761,0,0.381210681219194,0.599162557619291,2.74500361691176,0.628271760564322,3.47648640384553,2.30143911597297,1.45451631191692,0.811206315338788,0.81471491080253,1.11966273549084,0.505445516867349,1.26265113531884,1.17108398666433,1.37941262660084,1.80062129805349,2.86339153887859,2.17716797284249,2.17793324484245,2.15513966487376,1.03481348295606,9.91612767491074,18.5323958564463,10.205165201509,3.94552318369635,5.00485048606076,5.2237824978325,4.7329891373827,0.59710280045548,0,0.257347907114715,0.284163499395593,0.828503090142008,1.17263029990548,1.2604344302271,0.946978942340841,1.18058539048442,1.07986979021165,2.32533944750408,1.07309360559848,1.16765342367169,1.31647879930784,2.13417703302824,2.10778904819225,1.60819986167866,1.09775057645525,1.34206418760372,6.9395683026162,10.0846520131699,0.660837565967596,0.264450566663544,1.70630600428187,1.16118335930219,1.41754207454303,3.42861991859682,1.33426826306922,0.570676878337677,1.42358718463353,1.15289268306808,2.5133520880027,0.994782360205754,0.974820435595601,0,0,0.796565093017469,1.51734320762465,0.456994050438915,0,1.83286195060783,0.775809948670503,1.26244475802573,1.13825766823663,1.18088118383682,1.09899109488962,1.35736880313981,0.889357881261447,0,0.589676985339609,0,0.405720242777006,0,0.50925170356284,0,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.538192240565737,0,0.369506380333209,0.947457058852424,1.30371981153621,1.35796068620151,1.64283173801951,0.837531287209079,0.952174563544055,0.975668239288994,1.26108115284953,1.107323448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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:69506715..69506718,+ | |||
|id=chr18:69506715..69506718,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.53e-10!75;UBERON:0001016!3.53e-10!75;UBERON:0004121!3.88e-10!102;UBERON:0000924!3.88e-10!102;UBERON:0006601!3.88e-10!102;UBERON:0001017!4.55e-10!73;UBERON:0005743!4.55e-10!73;UBERON:0002346!1.85e-09!71;UBERON:0003075!1.85e-09!71;UBERON:0007284!1.85e-09!71;UBERON:0001049!8.04e-09!52;UBERON:0005068!8.04e-09!52;UBERON:0006241!8.04e-09!52;UBERON:0007135!8.04e-09!52;UBERON:0000468!1.38e-08!333;UBERON:0003056!1.39e-08!49;UBERON:0000955!1.58e-08!50;UBERON:0006238!1.58e-08!50;UBERON:0000033!1.64e-08!63;UBERON:0002616!4.40e-08!49;UBERON:0002020!8.21e-08!34;UBERON:0002791!8.31e-08!29;UBERON:0003528!8.31e-08!29;UBERON:0001893!8.31e-08!29;UBERON:0000956!1.37e-07!21;UBERON:0001869!1.37e-07!21;UBERON:0000203!1.37e-07!21;UBERON:0002780!1.40e-07!39;UBERON:0001890!1.40e-07!39;UBERON:0006240!1.40e-07!39;UBERON:0003080!2.72e-07!40;UBERON:0000922!8.38e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.56e-09,95;UBERON:0000924,1.56e-09,95;UBERON:0006601,1.56e-09,95;UBERON:0002346,4.21e-09,64;UBERON:0003075,4.21e-09,64;UBERON:0007284,4.21e-09,64;UBERON:0001017,4.79e-09,73;UBERON:0001016,5.38e-09,75;UBERON:0010371,3.29e-08,73;UBERON:0010314,4.66e-08,92;UBERON:0000955,5.03e-08,47;UBERON:0006238,5.03e-08,47;UBERON:0003056,6.92e-08,49;UBERON:0001049,7.51e-08,52;UBERON:0005068,7.51e-08,52;UBERON:0006241,7.51e-08,52;UBERON:0007135,7.51e-08,52;UBERON:0003528,1.39e-07,29;UBERON:0002791,1.39e-07,29;UBERON:0001893,1.39e-07,29;UBERON:0002020,1.44e-07,34;UBERON:0002616,1.51e-07,46;UBERON:0000073,1.51e-07,54;UBERON:0000956,1.67e-07,21;UBERON:0001869,1.67e-07,21;UBERON:0000203,1.67e-07,21;UBERON:0010708,6.22e-07,8;UBERON:0002780,6.79e-07,39;UBERON:0001890,6.79e-07,39;UBERON:0006240,6.79e-07,39 | |||
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| |||
|short_description=p@chr18:69506715..69506718,+ | |||
}} |
Revision as of 16:40, 13 September 2013
Short description: | p@chr18:69506715..69506718, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:69506715..69506718, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.56e-09 | 95 |
ectoderm | 1.56e-09 | 95 |
presumptive ectoderm | 1.56e-09 | 95 |
neurectoderm | 4.21e-09 | 64 |
neural plate | 4.21e-09 | 64 |
presumptive neural plate | 4.21e-09 | 64 |
central nervous system | 4.79e-09 | 73 |
nervous system | 5.38e-09 | 75 |
ecto-epithelium | 3.29e-08 | 73 |
structure with developmental contribution from neural crest | 4.66e-08 | 92 |
brain | 5.03e-08 | 47 |
future brain | 5.03e-08 | 47 |
pre-chordal neural plate | 6.92e-08 | 49 |
neural tube | 7.51e-08 | 52 |
neural rod | 7.51e-08 | 52 |
future spinal cord | 7.51e-08 | 52 |
neural keel | 7.51e-08 | 52 |
brain grey matter | 1.39e-07 | 29 |
regional part of telencephalon | 1.39e-07 | 29 |
telencephalon | 1.39e-07 | 29 |
gray matter | 1.44e-07 | 34 |
regional part of brain | 1.51e-07 | 46 |
regional part of nervous system | 1.51e-07 | 54 |
cerebral cortex | 1.67e-07 | 21 |
cerebral hemisphere | 1.67e-07 | 21 |
pallium | 1.67e-07 | 21 |
pectoral complex | 6.22e-07 | 8 |
regional part of forebrain | 6.79e-07 | 39 |
forebrain | 6.79e-07 | 39 |
future forebrain | 6.79e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.