FFCP PHASE1:Hg19::chr19:50682472..50682515,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:50682472..50682515,- | |||
|description=CAGE_peak_at_chr19:50682472..50682515,- | |||
|id=chr19:50682472..50682515,- | |||
|ontology_enrichment_celltype=CL:0000066!6.56e-13!254;CL:0000838!6.34e-11!52;CL:0000542!1.33e-10!53;CL:0000051!1.33e-10!53;CL:0000064!6.67e-07!3;CL:0005012!6.67e-07!3;CL:0000067!6.67e-07!3;CL:0002304!6.67e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.80e-26;3!CL:0000067;3.80e-26;3!CL:0005012;3.80e-26;3!CL:0002304;3.80e-26;3!CL:0000945;9.16e-13;24!CL:0000946;2.37e-10;1!CL:0000786;2.37e-10;1!CL:0000319;6.91e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.46e-26,3;CL:0000067,2.46e-26,3;CL:0005012,2.46e-26,3;CL:0002304,2.46e-26,3;CL:0000945,9.57e-13,24;CL:0000826,9.57e-13,24;CL:0000946,2.37e-10,1;CL:0000786,2.37e-10,1;CL:0000980,2.37e-10,1;CL:0000319,7.55e-10,1;CL:0000838,1.06e-09,52;CL:0000542,1.69e-09,53;CL:0000051,1.69e-09,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.64e-13!106;DOID:1749!9.78e-09!14;DOID:0050687!1.74e-08!143;DOID:162!6.28e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:630;1.65e-10;1!DOID:0050177;1.65e-10;1!DOID:0050427;1.65e-10;1!DOID:3030;6.91e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.65e-10,1;DOID:0050177,1.65e-10,1;DOID:0050427,1.65e-10,1;DOID:3030,7.55e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!8.13e-10!11;UBERON:0000488!2.16e-08!4;UBERON:0001778!6.67e-07!3;UBERON:0001775!6.67e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;3.80e-26;3!UBERON:0001775;3.80e-26;3!UBERON:0000488;8.80e-20;4!UBERON:0002203;2.15e-13;6!UBERON:0001768;2.15e-13;6!UBERON:0002200;2.15e-13;6!UBERON:0007625;1.21e-12;11!UBERON:0000997;3.39e-10;1!UBERON:0005056;3.39e-10;1!UBERON:0004176;3.39e-10;1!UBERON:0001801;5.62e-10;14!UBERON:0006876;1.53e-07;11!UBERON:0000019;2.16e-07;19!UBERON:0000047;2.16e-07;19!UBERON:0004088;2.16e-07;19!UBERON:0010230;2.16e-07;19!UBERON:0000970;4.98e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.46e-26,3;UBERON:0001775,2.46e-26,3;UBERON:0000488,6.37e-20,4;UBERON:0002203,1.74e-13,6;UBERON:0001768,1.74e-13,6;UBERON:0002200,1.74e-13,6;UBERON:0007625,1.01e-12,11;UBERON:0000997,3.10e-10,1;UBERON:0005056,3.10e-10,1;UBERON:0001801,4.87e-10,14;UBERON:0006876,1.37e-07,11;UBERON:0000019,4.52e-07,20;UBERON:0000047,4.52e-07,20;UBERON:0010312,4.52e-07,20;UBERON:0004088,4.52e-07,20;UBERON:0010230,4.52e-07,20;UBERON:0003072,4.52e-07,20;UBERON:0004128,4.52e-07,20;UBERON:0003071,4.52e-07,20;UBERON:0000970,9.68e-07,21;UBERON:0002104,9.68e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,1.52908960491121,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,2.06316195519468,2.54511827294832,1.57421562627358,0,0.767658796194425,0,0,0,0,0,0.426507697462265,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0.651083453856419,0,0.301150238155546,0.255973222308837,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,1.03988298880475,1.99556457716308,1.93236528524877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0.243947412259191,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0,0,0,1.44331342025273,0.463721619900307,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.896681151948218,0.197030760201927,1.72502059887614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,3.62868351995616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.770153371044148,0,0,0.527758144464379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.735120647943095,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.95497793895076,0,0.614321404198464,0,0,0,0.494411622680279,0,0,0,0,0,1.10776324914963,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06732237412927,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,5.56196651833622,0.311064574191741,0,0,0,0,0.853828638089378,0,3.29763502836749,2.74378712760257,0.174118413160805,0,0,0.19351266257817,0.0730893170861856,0.328461828212837,0.0969890164884194,0,0,0,0,0,0.977756913674015,0.240476460754601,0.213452994739353,0.999048047910651,0,0,0,0,0.124252535565433,0.471388069233591,0.135904206073614,0.104602846312333,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0,0,0,0.137539436597234,0,0,0,0,0,0,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,1.40963004463334,0,0,0,0,0.197611631897944,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0.226705925512272,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.366857197043358,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,3.22655165156182,0,0,0,0,0,0,0,1.12108865325516,0,0.863710364874486,0,0.142953088353313,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.447421727191169,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0,0,0.452888530700021,0,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.71421575442263,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0,0,0.0645889098360061,0.806971285846153,0,0,0,0,0,0,0.215166616178029,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,6.41136984606466 | |||
|short_description=p@chr19:50682472..50682515,- | |||
}} |
Latest revision as of 16:20, 27 July 2015
Short description: | p@chr19:50682472..50682515, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:50682472..50682515, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.46e-26 | 3 |
ciliated epithelial cell | 2.46e-26 | 3 |
multi-ciliated epithelial cell | 2.46e-26 | 3 |
non-pigmented ciliary epithelial cell | 2.46e-26 | 3 |
lymphocyte of B lineage | 9.57e-13 | 24 |
pro-B cell | 9.57e-13 | 24 |
antibody secreting cell | 2.37e-10 | 1 |
plasma cell | 2.37e-10 | 1 |
plasmablast | 2.37e-10 | 1 |
mucus secreting cell | 7.55e-10 | 1 |
lymphoid lineage restricted progenitor cell | 1.06e-09 | 52 |
lymphocyte | 1.69e-09 | 53 |
common lymphoid progenitor | 1.69e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 2.46e-26 | 3 |
ciliary body | 2.46e-26 | 3 |
atypical epithelium | 6.37e-20 | 4 |
vasculature of eye | 1.74e-13 | 6 |
uvea | 1.74e-13 | 6 |
vasculature of head | 1.74e-13 | 6 |
pigment epithelium of eye | 1.01e-12 | 11 |
mammalian vulva | 3.10e-10 | 1 |
external female genitalia | 3.10e-10 | 1 |
anterior segment of eyeball | 4.87e-10 | 14 |
vasculature of organ | 1.37e-07 | 11 |
camera-type eye | 4.52e-07 | 20 |
simple eye | 4.52e-07 | 20 |
immature eye | 4.52e-07 | 20 |
ocular region | 4.52e-07 | 20 |
eyeball of camera-type eye | 4.52e-07 | 20 |
optic cup | 4.52e-07 | 20 |
optic vesicle | 4.52e-07 | 20 |
eye primordium | 4.52e-07 | 20 |
eye | 9.68e-07 | 21 |
visual system | 9.68e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.65e-10 | 1 |
monogenic disease | 1.65e-10 | 1 |
xeroderma pigmentosum | 1.65e-10 | 1 |
mucinous adenocarcinoma | 7.55e-10 | 1 |