FFCP PHASE1:Hg19::chr12:95610443..95610446,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:95610443..95610446,- | |||
|description=CAGE_peak_at_chr12:95610443..95610446,- | |description=CAGE_peak_at_chr12:95610443..95610446,- | ||
|id=chr12:95610443..95610446,- | |id=chr12:95610443..95610446,- | ||
|ontology_enrichment_celltype=CL:0000066!3.93e-07!254;CL:0002009!7.65e-07!65 | |ontology_enrichment_celltype=CL:0000066!3.93e-07!254;CL:0002009!7.65e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.69e-12;6!CL:0000404;1.69e-12;6!CL:0000511;5.30e-09;1!CL:0002625;5.30e-09;1!CL:0000216;5.30e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.35e-12,6;CL:0000031,1.35e-12,6;CL:0000404,1.35e-12,6;CL:0000047,1.43e-09,8;CL:0000511,2.60e-09,1;CL:0002625,2.60e-09,1;CL:0000216,2.60e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000031;1.69e-12;6!UBERON:0005425;1.88e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.88e-09;1!UBERON:0001785;1.88e-09;1!UBERON:0002464;1.88e-09;1!UBERON:0004904;1.88e-09;1!UBERON:0001021;1.88e-09;1!UBERON:0001136;5.30e-09;1!UBERON:0001343;5.30e-09;1!UBERON:0004910;5.30e-09;1!UBERON:0004813;5.30e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.60e-09,1;UBERON:0001785,1.60e-09,1;UBERON:0002464,1.60e-09,1;UBERON:0004904,1.60e-09,1;UBERON:0001021,1.60e-09,1;UBERON:0003902,1.60e-09,1;UBERON:0005425,1.60e-09,1;UBERON:0001136,2.60e-09,1;UBERON:0001343,2.60e-09,1;UBERON:0004910,2.60e-09,1;UBERON:0005154,2.60e-09,1;UBERON:0005295,2.60e-09,1;UBERON:0004813,2.60e-09,1;UBERON:0005297,2.60e-09,1;UBERON:0005294,2.60e-09,1;UBERON:0010141,2.60e-09,1;UBERON:0005891,2.60e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,1.83884244895785,0,0,0.309868802321207,0.568676929949686,0.293600439334847,0.553995408531877,0.401088894940283,0.434021741431704,1.11957737119962,0.647787332037959,0.515151135268373,0.726991193897824,0,0,0.697287110717054,0,0,0,0,0.709446689665756,0,0,0,0.188242339542605,0,0,0,0,0,0.659702600373432,0.598390972864896,1.27867425159808,0.580418477257168,0,0.622822248995575,0.251248665256743,0.521482918420201,0.868755378820466,0,0,0,0,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0.196468613246569,0.728590576585084,0,0.649094787309367,0.522389211897802,0.664789802594326,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.516833518338658,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0,0,0.357198913136319,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.662045904066094,0.286836620748814,0,0,0,0,0.311211035399766,0.538842688278752,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0.386521706326594,0.545492241181669,0.573609190778008,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0.392442930250692,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0.402115889646523,0.185176890317059,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0,0.297262324577456,0,0.839910640994298,0.425325291727159,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0,0.399891964728228,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0.591092280605782,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,1.00253235151642,0,0.114814448164607,0.182091168006717,0,0,0.231046011313244,0,0,0.633309773357254,0,0.340187410553031,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.309123034943167,0,0.165018999841176,1.14853107599234,0,1.6068392984416,0,0,0,0,0.214840489736547,0.145016693914229,0,0.0890320356467374,0.991709492165869,0,1.02090169995667,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,1.29151611801369,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0.490080431962063,0.185803175125719,0.432807638929335,0.142283686696828,0,0,0,0.211673582723883,0,0,0.684704037099577,0,0,0,0.1605880751037,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0.222886768554957,0,0.23874448473769,0.593929361665277,0.307160702099232,0,0,0.111308705022906,0,0.63337622438398,0.19924798825107,0,0.251932747854276,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0.359030577639089,0.217294743844016,0,0,0,0,0,0,0.451191321234361,0.19606253431774,0,0,0,0.210998064528027,0,0.706765357169704,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0,0,0,0.234264445725339,0.364909578431332,0,0,0,0,0,0.379119477770928,0.150323419414493,0,0,0,0,1.19472429772959,0,0.138674673013139,0,0,0.174118413160805,0,0.687944129886466,0,0.146178634172371,0.164230914106418,0,0,0,0,0.19871461170299,0.189932387867636,0.195551382734803,0,0,0,0,0.229073192331831,1.02956998717179,0.288109595976299,0.124252535565433,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,1.16495949527454,0,0.0824158583811665,0,0,0.0846733320657845,0,0.408610218334727,2.41129722697529,1.37539436597234,2.07720169014593,0.674921674654501,2.32140586367385,0,0.335434687599266,0.0788057072991982,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0.171086837884329,0,0.320362237703084,0.157204305099666,0,0,0.197611631897944,1.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| ||
|short_description=p@chr12:95610443..95610446,- | |short_description=p@chr12:95610443..95610446,- | ||
}} | }} |
Latest revision as of 13:48, 24 July 2015
Short description: | p@chr12:95610443..95610446, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:95610443..95610446, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.35e-12 | 6 |
neuroblast | 1.35e-12 | 6 |
electrically signaling cell | 1.35e-12 | 6 |
neuronal stem cell | 1.43e-09 | 8 |
androgen binding protein secreting cell | 2.60e-09 | 1 |
seminiferous tubule epithelial cell | 2.60e-09 | 1 |
Sertoli cell | 2.60e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.60e-09 | 1 |
cranial nerve | 1.60e-09 | 1 |
nerve trunk | 1.60e-09 | 1 |
nerve connecting eye with brain | 1.60e-09 | 1 |
nerve | 1.60e-09 | 1 |
retinal neural layer | 1.60e-09 | 1 |
presumptive neural retina | 1.60e-09 | 1 |
mesothelium | 2.60e-09 | 1 |
seminiferous tubule of testis | 2.60e-09 | 1 |
epithelium of male gonad | 2.60e-09 | 1 |
epithelial cord | 2.60e-09 | 1 |
sex cord | 2.60e-09 | 1 |
seminiferous tubule epithelium | 2.60e-09 | 1 |
testis sex cord | 2.60e-09 | 1 |
genital ridge | 2.60e-09 | 1 |
primitive sex cord of indifferent gonad | 2.60e-09 | 1 |
coelomic epithelium | 2.60e-09 | 1 |