FFCP PHASE1:Hg19::chr1:36814419..36814445,-: Difference between revisions
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|id=chr1:36814419..36814445,-
|short_description=p@chr1:36814419..36814445,-
|description=CAGE_peak_at_chr1:36814419..36814445,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:36814419..36814445,- | |||
|description=CAGE_peak_at_chr1:36814419..36814445,- | |||
|id=chr1:36814419..36814445,- | |||
|ontology_enrichment_celltype=CL:0002057!2.93e-09!42;CL:0000860!1.80e-08!45;CL:0002536!1.90e-08!2;CL:0000766!9.25e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.73e-26;19!CL:0002537;5.45e-17;5!CL:0002536;3.70e-11;2!CL:0000771;3.70e-11;2!CL:0000094;8.47e-11;8!CL:0000081;4.18e-08;11!CL:0002541;5.93e-08;3!CL:0000775;7.26e-08;3!CL:0002577;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.73e-26,19;CL:0002537,5.45e-17,5;CL:0000771,3.70e-11,2;CL:0002536,4.52e-11,2;CL:0000094,8.06e-11,8;CL:0000081,4.04e-08,11;CL:0002541,5.93e-08,3;CL:0002577,6.34e-08,3;CL:0000775,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.88e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.17e-16!14;UBERON:0000158!6.17e-16!14;UBERON:0001987!5.20e-09!4;UBERON:0004340!5.20e-09!4;UBERON:0000305!8.37e-09!7;UBERON:0003124!9.24e-09!7;UBERON:0000478!1.13e-08!24;UBERON:0003127!2.36e-08!2;UBERON:0000341!3.49e-08!2;UBERON:0004871!1.08e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.67e-32;10!UBERON:0000158;4.67e-32;10!UBERON:0000478;1.18e-29;24!UBERON:0000305;3.76e-26;7!UBERON:0001987;7.74e-21;4!UBERON:0003127;1.82e-11;2!UBERON:0003124;5.93e-08;3!UBERON:0000920;5.93e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.05e-50,14;UBERON:0000158,1.05e-50,14;UBERON:0000478,1.18e-29,24;UBERON:0003124,3.17e-26,7;UBERON:0000305,4.47e-26,7;UBERON:0004871,6.43e-23,8;UBERON:0001987,6.33e-21,4;UBERON:0004340,6.33e-21,4;UBERON:0003127,1.82e-11,2;UBERON:0004923,8.80e-11,66;UBERON:0000920,5.93e-08,3 | |||
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| ||
|short_description=p@chr1:36814419..36814445,- | |||
}} | }} |
Latest revision as of 07:47, 28 July 2015
Short description: | p@chr1:36814419..36814445, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:36814419..36814445, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.73e-26 | 19 |
amnion mesenchymal stem cell | 5.45e-17 | 5 |
eosinophil | 3.70e-11 | 2 |
amniotic epithelial cell | 4.52e-11 | 2 |
granulocyte | 8.06e-11 | 8 |
blood cell | 4.04e-08 | 11 |
chorionic membrane mesenchymal stem cell | 5.93e-08 | 3 |
placental epithelial cell | 6.34e-08 | 3 |
neutrophil | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.05e-50 | 14 |
membranous layer | 1.05e-50 | 14 |
extraembryonic structure | 1.18e-29 | 24 |
chorion | 3.17e-26 | 7 |
amnion | 4.47e-26 | 7 |
somatic layer of lateral plate mesoderm | 6.43e-23 | 8 |
placenta | 6.33e-21 | 4 |
allantois | 6.33e-21 | 4 |
open tracheal system trachea | 1.82e-11 | 2 |
organ component layer | 8.80e-11 | 66 |
egg chorion | 5.93e-08 | 3 |