FFCP PHASE1:Hg19::chr6:33265259..33265285,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000066!2.39e-16!254;CL:0000223!5.86e-13!59;CL:0002076!1.21e-12!43;CL:0002368!2.34e-08!13;CL:0002251!5.07e-07!21 | |ontology_enrichment_celltype=CL:0000066!2.39e-16!254;CL:0000223!5.86e-13!59;CL:0002076!1.21e-12!43;CL:0002368!2.34e-08!13;CL:0002251!5.07e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002621;9.18e-15;3!CL:0002076;2.04e-07;42!CL:0002577;2.55e-07;3!CL:0002328;3.07e-07;3 | |ontology_enrichment_celltype_v019=CL:0002621;9.18e-15;3!CL:0002076;2.04e-07;42!CL:0002577;2.55e-07;3!CL:0002328;3.07e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002621,9.23e-15,3;CL:0000223,6.35e-11,58;CL:0002076,3.00e-09,42;CL:0000066,1.59e-07,253;CL:0002577,2.11e-07,3;CL:0002328,3.18e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:5093!6.99e-07!4;DOID:1612!6.99e-07!4 | |ontology_enrichment_disease=DOID:5093!6.99e-07!4;DOID:1612!6.99e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.46e-20;4!DOID:1612;1.46e-20;4 | |ontology_enrichment_disease_v019=DOID:5093;1.46e-20;4!DOID:1612;1.46e-20;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.97e-20,4;DOID:1612,1.97e-20,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.03e-10!169;UBERON:0000925!2.03e-10!169;UBERON:0006595!2.03e-10!169;UBERON:0003124!2.66e-09!7;UBERON:0001004!3.81e-09!72;UBERON:0005631!3.73e-08!14;UBERON:0000158!3.73e-08!14;UBERON:0000166!4.08e-08!21;UBERON:0000161!4.94e-08!35 | |ontology_enrichment_uberon=UBERON:0004119!2.03e-10!169;UBERON:0000925!2.03e-10!169;UBERON:0006595!2.03e-10!169;UBERON:0003124!2.66e-09!7;UBERON:0001004!3.81e-09!72;UBERON:0005631!3.73e-08!14;UBERON:0000158!3.73e-08!14;UBERON:0000166!4.08e-08!21;UBERON:0000161!4.94e-08!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;9.18e-15;3!UBERON:0004807;1.99e-12;22!UBERON:0000310;3.13e-12;10!UBERON:0001987;1.21e-11;4!UBERON:0000161;3.75e-11;19!UBERON:0000166;3.75e-11;19!UBERON:0001443;4.32e-11;11!UBERON:0005911;1.99e-08;36!UBERON:0000915;1.22e-07;52!UBERON:0006947;1.34e-07;3!UBERON:0004054;1.34e-07;3!UBERON:0001044;1.49e-07;6!UBERON:0003293;1.49e-07;6!UBERON:0003294;1.49e-07;6!UBERON:0010047;1.49e-07;6!UBERON:0003408;1.49e-07;6!UBERON:0000167;1.49e-07;6!UBERON:0000165;2.84e-07;28!UBERON:0004815;3.07e-07;3!UBERON:0002031;3.07e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001949;9.18e-15;3!UBERON:0004807;1.99e-12;22!UBERON:0000310;3.13e-12;10!UBERON:0001987;1.21e-11;4!UBERON:0000161;3.75e-11;19!UBERON:0000166;3.75e-11;19!UBERON:0001443;4.32e-11;11!UBERON:0005911;1.99e-08;36!UBERON:0000915;1.22e-07;52!UBERON:0006947;1.34e-07;3!UBERON:0004054;1.34e-07;3!UBERON:0001044;1.49e-07;6!UBERON:0003293;1.49e-07;6!UBERON:0003294;1.49e-07;6!UBERON:0010047;1.49e-07;6!UBERON:0003408;1.49e-07;6!UBERON:0000167;1.49e-07;6!UBERON:0000165;2.84e-07;28!UBERON:0004815;3.07e-07;3!UBERON:0002031;3.07e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,9.23e-15,3;UBERON:0000310,3.29e-12,10;UBERON:0001987,9.44e-12,4;UBERON:0004340,9.44e-12,4;UBERON:0001443,4.52e-11,11;UBERON:0000166,1.41e-09,22;UBERON:0004807,1.92e-09,28;UBERON:0001004,3.07e-09,74;UBERON:0000915,7.27e-09,52;UBERON:0001044,1.31e-07,6;UBERON:0003293,1.31e-07,6;UBERON:0003294,1.31e-07,6;UBERON:0010047,1.31e-07,6;UBERON:0000167,1.31e-07,6;UBERON:0006947,1.48e-07,3;UBERON:0004054,1.48e-07,3;UBERON:0004815,3.18e-07,3;UBERON:0002031,3.18e-07,3;UBERON:0000165,4.84e-07,29;UBERON:0000930,4.84e-07,29;UBERON:0003124,6.90e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0,0,0,0,2.75826367343678,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,1.09288586487763,0.741568885568859,1.29818957461873,0.696518949197069,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09217365061275,1.09098448236334,1.72082757233402,0.243947412259191,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0.590789906681404,0,0.245976877086227,0,1.64625428112938,1.1240175325762,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,6.3216351836742,6.00940313466411,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0,0,0.909382714338778,3.32870879020994,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.184161977871793,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,2.57602529119306,0,0,1.14853107599234,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,1.15699440752685,0.960950336825531,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,2.7301702225266,0.43050537267123,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.95497793895076,0,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08342208868187,4.19807999981739,1.44999915086959,0.796554137998498,1.01701460117107,2.6002644994473,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,4.84184199214926,0.897576444097721,1.95565269459615,0.638002319463839,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,3.13063390291344,0,2.36750641709634,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,1.90915712168644,0.0979923974143777,0,0.52418000472609,0.171986032471617,0,0,0,1.06687918137261,0,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0.372757606696298,0.942776138467182,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0.687697182986169,0.83088067605837,0,0,0.0607495566580247,0.335434687599266,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,0,0,0,0,1.40963004463334,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,1.09937867375164,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57036349601641,0,0.733714394086716,0.346576998451015,0,0,0,0.0752103283492573,0,0,1.57144016688853,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,6.38657065171,0.230467975111559,0,0,0,0,0.222462803784138,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,2.76503864725637,1.29068207646083,0,0.0852134047591577,4.23387050190929,0,0,0,1.23040974977572,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0.11294608203896,0,0,0,0.874238242015829,0,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0.18378979906969,0,0,0,0,0,1.0661699095049,0,0,0,0,0,0.202117188958219,0.653150243690884,0.684466602170562,0.80822463617505,0.645499848534087,0.99798106963804,0.0814032686109745,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0,0,0,0,2.75826367343678,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,1.09288586487763,0.741568885568859,1.29818957461873,0.696518949197069,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09217365061275,1.09098448236334,1.72082757233402,0.243947412259191,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0.590789906681404,0,0.245976877086227,0,1.64625428112938,1.1240175325762,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,6.3216351836742,6.00940313466411,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0,0,0.909382714338778,3.32870879020994,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.184161977871793,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,2.57602529119306,0,0,1.14853107599234,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,1.15699440752685,0.960950336825531,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,2.7301702225266,0.43050537267123,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.95497793895076,0,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08342208868187,4.19807999981739,1.44999915086959,0.796554137998498,1.01701460117107,2.6002644994473,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,4.84184199214926,0.897576444097721,1.95565269459615,0.638002319463839,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,3.13063390291344,0,2.36750641709634,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,1.90915712168644,0.0979923974143777,0,0.52418000472609,0.171986032471617,0,0,0,1.06687918137261,0,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0.372757606696298,0.942776138467182,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0.687697182986169,0.83088067605837,0,0,0.0607495566580247,0.335434687599266,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,0,0,0,0,1.40963004463334,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,1.09937867375164,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57036349601641,0,0.733714394086716,0.346576998451015,0,0,0,0.0752103283492573,0,0,1.57144016688853,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,6.38657065171,0.230467975111559,0,0,0,0,0.222462803784138,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,2.76503864725637,1.29068207646083,0,0.0852134047591577,4.23387050190929,0,0,0,1.23040974977572,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0.11294608203896,0,0,0,0.874238242015829,0,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0.18378979906969,0,0,0,0,0,1.0661699095049,0,0,0,0,0,0.202117188958219,0.653150243690884,0.684466602170562,0.80822463617505,0.645499848534087,0.99798106963804,0.0814032686109745,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p15@RGL2 | |short_description=p15@RGL2 | ||
}} | }} |
Revision as of 06:41, 18 November 2012
Short description: | p15@RGL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_RGL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -96bp_to_ENST00000460988_5end |
EntrezGene: | RGL2 |
HGNC: | 9769 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 9.23e-15 | 3 |
endodermal cell | 6.35e-11 | 58 |
endo-epithelial cell | 3.00e-09 | 42 |
epithelial cell | 1.59e-07 | 253 |
placental epithelial cell | 2.11e-07 | 3 |
bronchial epithelial cell | 3.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 9.23e-15 | 3 |
breast | 3.29e-12 | 10 |
placenta | 9.44e-12 | 4 |
allantois | 9.44e-12 | 4 |
chest | 4.52e-11 | 11 |
oral opening | 1.41e-09 | 22 |
respiratory system epithelium | 1.92e-09 | 28 |
respiratory system | 3.07e-09 | 74 |
thoracic segment of trunk | 7.27e-09 | 52 |
saliva-secreting gland | 1.31e-07 | 6 |
gland of oral region | 1.31e-07 | 6 |
gland of foregut | 1.31e-07 | 6 |
oral gland | 1.31e-07 | 6 |
oral cavity | 1.31e-07 | 6 |
male genital duct | 1.48e-07 | 3 |
internal male genitalia | 1.48e-07 | 3 |
lower respiratory tract epithelium | 3.18e-07 | 3 |
epithelium of bronchus | 3.18e-07 | 3 |
mouth | 4.84e-07 | 29 |
stomodeum | 4.84e-07 | 29 |
chorion | 6.90e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.97e-20 | 4 |
breast cancer | 1.97e-20 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.