FFCP PHASE1:Hg19::chr13:110076646..110076651,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:110076646..110076651,+ | |||
|coexpression_cluster_id=C1699 | |||
|description=CAGE_peak_at_chr13:110076646..110076651,+ | |description=CAGE_peak_at_chr13:110076646..110076651,+ | ||
|id=chr13:110076646..110076651,+ | |id=chr13:110076646..110076651,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.44e-27!42;CL:0000860!3.21e-24!45;CL:0000557!1.36e-20!71;CL:0000839!7.73e-20!70;CL:0002009!1.60e-19!65;CL:0002194!5.36e-18!63;CL:0000576!5.36e-18!63;CL:0000040!5.36e-18!63;CL:0000559!5.36e-18!63;CL:0000766!4.60e-16!76;CL:0000763!1.42e-15!112;CL:0000049!1.42e-15!112;CL:0002031!1.26e-13!124;CL:0000738!2.76e-12!140;CL:0000037!1.00e-11!172;CL:0000566!1.00e-11!172;CL:0002032!2.12e-11!165;CL:0000837!2.12e-11!165;CL:0000988!1.78e-10!182;CL:0002087!4.06e-10!119;CL:0000197!1.08e-07!6;CL:0000098!1.08e-07!6;CL:0002167!1.08e-07!6 | |ontology_enrichment_celltype=CL:0002057!6.44e-27!42;CL:0000860!3.21e-24!45;CL:0000557!1.36e-20!71;CL:0000839!7.73e-20!70;CL:0002009!1.60e-19!65;CL:0002194!5.36e-18!63;CL:0000576!5.36e-18!63;CL:0000040!5.36e-18!63;CL:0000559!5.36e-18!63;CL:0000766!4.60e-16!76;CL:0000763!1.42e-15!112;CL:0000049!1.42e-15!112;CL:0002031!1.26e-13!124;CL:0000738!2.76e-12!140;CL:0000037!1.00e-11!172;CL:0000566!1.00e-11!172;CL:0002032!2.12e-11!165;CL:0000837!2.12e-11!165;CL:0000988!1.78e-10!182;CL:0002087!4.06e-10!119;CL:0000197!1.08e-07!6;CL:0000098!1.08e-07!6;CL:0002167!1.08e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.09e-24;33!CL:0002057;5.09e-24;33!CL:0000473;1.89e-20;39!CL:0000234;1.89e-20;39!CL:0000576;3.55e-16;48!CL:0000766;1.57e-10;69!CL:0000197;4.85e-09;6!CL:0000098;4.85e-09;6!CL:0002167;4.85e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.04e-31,48;CL:0000234,7.04e-31,48;CL:0000860,1.12e-29,42;CL:0002057,1.12e-29,42;CL:0002009,4.38e-24,61;CL:0000557,3.38e-23,67;CL:0000839,2.77e-22,66;CL:0002194,3.58e-22,59;CL:0000576,3.58e-22,59;CL:0000040,3.58e-22,59;CL:0000559,3.58e-22,59;CL:0000766,3.45e-18,72;CL:0000763,2.00e-16,108;CL:0000049,2.00e-16,108;CL:0002031,1.40e-11,120;CL:0000738,9.56e-10,136;CL:0000037,9.84e-10,168;CL:0002032,3.14e-09,161;CL:0000837,3.14e-09,161;CL:0002087,4.40e-09,115;CL:0000197,4.82e-09,6;CL:0000098,4.82e-09,6;CL:0002167,4.82e-09,6;CL:0000988,1.56e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-21;42!CL:0000049;7.84e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.45e-19!80;UBERON:0001474!4.30e-17!86;UBERON:0004765!1.67e-14!101;UBERON:0001434!1.67e-14!101;UBERON:0002390!9.71e-13!102;UBERON:0003061!9.71e-13!102;UBERON:0002193!7.51e-12!112;UBERON:0002405!1.08e-11!115;UBERON:0002204!2.61e-09!167;UBERON:0001737!6.31e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.54e-10;9!UBERON:0001557;1.54e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.25e-21,76;UBERON:0001474,7.70e-19,82;UBERON:0002405,3.82e-18,93;UBERON:0004765,6.90e-18,90;UBERON:0001434,8.97e-15,100;UBERON:0002390,1.85e-14,98;UBERON:0003061,1.85e-14,98;UBERON:0002193,9.45e-14,108;UBERON:0001737,1.51e-10,9;UBERON:0002204,1.53e-09,167 | |||
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| ||
|short_description=p@chr13:110076646..110076651,+ | |short_description=p@chr13:110076646..110076651,+ | ||
}} | }} |
Latest revision as of 14:26, 24 July 2015
Short description: | p@chr13:110076646..110076651, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110076646..110076651, + |
Coexpression cluster: | C1699_acute_Monocytederived_skeletal_Sebocyte_locus_penis_Aortic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.04e-31 | 48 |
phagocyte | 7.04e-31 | 48 |
classical monocyte | 1.12e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-29 | 42 |
macrophage dendritic cell progenitor | 4.38e-24 | 61 |
granulocyte monocyte progenitor cell | 3.38e-23 | 67 |
myeloid lineage restricted progenitor cell | 2.77e-22 | 66 |
monopoietic cell | 3.58e-22 | 59 |
monocyte | 3.58e-22 | 59 |
monoblast | 3.58e-22 | 59 |
promonocyte | 3.58e-22 | 59 |
myeloid leukocyte | 3.45e-18 | 72 |
myeloid cell | 2.00e-16 | 108 |
common myeloid progenitor | 2.00e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 1.40e-11 | 120 |
leukocyte | 9.56e-10 | 136 |
hematopoietic stem cell | 9.84e-10 | 168 |
hematopoietic oligopotent progenitor cell | 3.14e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.14e-09 | 161 |
nongranular leukocyte | 4.40e-09 | 115 |
receptor cell | 4.82e-09 | 6 |
sensory epithelial cell | 4.82e-09 | 6 |
olfactory epithelial cell | 4.82e-09 | 6 |
hematopoietic cell | 1.56e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.25e-21 | 76 |
bone element | 7.70e-19 | 82 |
immune system | 3.82e-18 | 93 |
skeletal element | 6.90e-18 | 90 |
skeletal system | 8.97e-15 | 100 |
hematopoietic system | 1.85e-14 | 98 |
blood island | 1.85e-14 | 98 |
hemolymphoid system | 9.45e-14 | 108 |
larynx | 1.51e-10 | 9 |
musculoskeletal system | 1.53e-09 | 167 |