FFCP PHASE1:Hg19::chr15:42179084..42179102,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:42179084..42179102,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr15:42179084..42179102,- | |||
|id=chr15:42179084..42179102,- | |||
|ontology_enrichment_celltype=CL:0000243!8.84e-07!15;CL:0000125!8.84e-07!15;CL:0000030!8.84e-07!15;CL:0000339!8.84e-07!15 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.40e-66;3 | |||
|ontology_enrichment_disease=DOID:3093!3.14e-09!11;DOID:1324!1.54e-07!15;DOID:5409!1.59e-07!4;DOID:0050615!4.02e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.29e-13;4!DOID:1325;2.35e-08;7!DOID:3904;2.35e-08;7!DOID:3905;8.85e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.29e-13,4;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7;DOID:3905,8.85e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001905!6.61e-50!2;UBERON:0002757!6.61e-50!2;UBERON:0010134!6.61e-50!2;UBERON:0002784!6.61e-50!2;UBERON:0005408!6.61e-50!2;UBERON:0001899!6.61e-50!2;UBERON:0003296!1.43e-25!4;UBERON:0010133!1.43e-25!4;UBERON:0000966!5.44e-21!5;UBERON:0005388!5.44e-21!5;UBERON:0001802!5.44e-21!5;UBERON:0001894!4.37e-15!7;UBERON:0006222!4.37e-15!7;UBERON:0000970!5.70e-12!20;UBERON:0002104!1.96e-11!21;UBERON:0000020!1.69e-10!23;UBERON:0001032!4.35e-10!24;UBERON:0004456!4.35e-10!24;UBERON:0005743!2.84e-07!86;UBERON:0003056!7.76e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.22e-40;5!UBERON:0005388;2.22e-40;5!UBERON:0001802;2.22e-40;5!UBERON:0000970;3.95e-23;20!UBERON:0002104;4.43e-22;21!UBERON:0000020;2.97e-20;23!UBERON:0001032;1.88e-19;24!UBERON:0004456;1.88e-19;24!UBERON:0000019;1.63e-11;19!UBERON:0000047;1.63e-11;19!UBERON:0004088;1.63e-11;19!UBERON:0010230;1.63e-11;19!UBERON:0001456;1.61e-10;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,7.07e-34,6;UBERON:0005388,7.07e-34,6;UBERON:0001802,7.07e-34,6;UBERON:0000970,4.43e-22,21;UBERON:0002104,4.43e-22,21;UBERON:0000020,1.88e-19,24;UBERON:0001032,1.88e-19,24;UBERON:0004456,1.88e-19,24;UBERON:0000019,5.42e-11,20;UBERON:0000047,5.42e-11,20;UBERON:0010312,5.42e-11,20;UBERON:0004088,5.42e-11,20;UBERON:0010230,5.42e-11,20;UBERON:0003072,5.42e-11,20;UBERON:0004128,5.42e-11,20;UBERON:0003071,5.42e-11,20;UBERON:0001456,4.33e-10,22;UBERON:0005085,1.86e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29363407483012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.672567444437648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.723496481918,2.52821778772363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97892930141772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:42179084..42179102,- | |||
}} |
Latest revision as of 01:38, 25 July 2015
Short description: | p@chr15:42179084..42179102, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:42179084..42179102, - |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 7.07e-34 | 6 |
photoreceptor array | 7.07e-34 | 6 |
posterior segment of eyeball | 7.07e-34 | 6 |
eye | 4.43e-22 | 21 |
visual system | 4.43e-22 | 21 |
sense organ | 1.88e-19 | 24 |
sensory system | 1.88e-19 | 24 |
entire sense organ system | 1.88e-19 | 24 |
camera-type eye | 5.42e-11 | 20 |
simple eye | 5.42e-11 | 20 |
immature eye | 5.42e-11 | 20 |
ocular region | 5.42e-11 | 20 |
eyeball of camera-type eye | 5.42e-11 | 20 |
optic cup | 5.42e-11 | 20 |
optic vesicle | 5.42e-11 | 20 |
eye primordium | 5.42e-11 | 20 |
face | 4.33e-10 | 22 |
ectodermal placode | 1.86e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.29e-13 | 4 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |
lung carcinoma | 8.85e-07 | 9 |