FFCP PHASE1:Hg19::chr4:109089515..109089523,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:109089515..109089523,-
|short_description=p31@LEF1
|description=CAGE_peak_31_at_LEF1_5end
|association_with_transcript=54bp_to_ENST00000265165,uc003hyt.1,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJU2 | |UniProt=Q9UJU2 | ||
|association_with_transcript=54bp_to_ENST00000265165,uc003hyt.1,uc003hyu.1,uc003hyv.1,uc010imb.1_5end | |||
|cluster_id=chr4:109089515..109089523,- | |||
|coexpression_cluster_id=C921 | |||
|description=CAGE_peak_31_at_LEF1_5end | |||
|id=chr4:109089515..109089523,- | |||
|ontology_enrichment_celltype=CL:0000084!2.75e-21!25;CL:0000827!2.75e-21!25;CL:0000791!9.80e-21!18;CL:0000789!9.80e-21!18;CL:0002420!9.80e-21!18;CL:0002419!9.80e-21!18;CL:0000790!9.80e-21!18;CL:0000542!2.54e-16!53;CL:0000051!2.54e-16!53;CL:0000838!2.81e-15!52;CL:0000625!1.82e-14!11;CL:0000624!2.31e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.67e-29;25!CL:0000791;6.93e-23;18!CL:0000789;6.93e-23;18!CL:0002419;6.93e-23;18!CL:0000625;3.48e-17;11!CL:0000817;5.37e-13;1!CL:0000542;1.71e-09;53!CL:0000624;1.04e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.81e-29,25;CL:0000827,7.81e-29,25;CL:0000791,8.43e-23,18;CL:0000789,8.43e-23,18;CL:0002420,8.43e-23,18;CL:0002419,8.43e-23,18;CL:0000790,8.43e-23,18;CL:0000625,4.13e-17,11;CL:0000838,5.60e-17,52;CL:0000542,1.22e-16,53;CL:0000051,1.22e-16,53;CL:0000624,1.08e-08,6;CL:0000738,3.35e-07,136;CL:0002087,5.11e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;6.93e-23;18!CL:0000051;1.71e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.29e-09!15;UBERON:0000179!1.29e-09!15;UBERON:0000463!1.29e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.21e-24;2!UBERON:0005058;1.21e-24;2!UBERON:0009113;1.21e-24;2!UBERON:0004177;1.90e-10;5!UBERON:0005057;1.90e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.70e-13,4;UBERON:0005058,7.70e-13,4;UBERON:0009113,7.70e-13,4;UBERON:0003295,7.70e-13,4;UBERON:0005562,7.70e-13,4;UBERON:0003351,7.33e-09,6;UBERON:0004177,1.02e-07,7;UBERON:0005057,1.02e-07,7 | |||
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| ||
|short_description=p31@LEF1 | |||
}} | }} |
Latest revision as of 15:09, 24 September 2015
Short description: | p31@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_LEF1_5end |
Coexpression cluster: | C921_chronic_thymus_CD4_acute_CD8_Hodgkin_Peripheral |
Association with transcript: | 54bp_to_ENST00000265165, uc003hyt.1, uc003hyu.1, uc003hyv.1, uc010imb.1_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.81e-29 | 25 |
pro-T cell | 7.81e-29 | 25 |
mature alpha-beta T cell | 8.43e-23 | 18 |
alpha-beta T cell | 8.43e-23 | 18 |
immature T cell | 8.43e-23 | 18 |
mature T cell | 8.43e-23 | 18 |
immature alpha-beta T cell | 8.43e-23 | 18 |
CD8-positive, alpha-beta T cell | 4.13e-17 | 11 |
lymphoid lineage restricted progenitor cell | 5.60e-17 | 52 |
lymphocyte | 1.22e-16 | 53 |
common lymphoid progenitor | 1.22e-16 | 53 |
CD4-positive, alpha-beta T cell | 1.08e-08 | 6 |
leukocyte | 3.35e-07 | 136 |
nongranular leukocyte | 5.11e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.70e-13 | 4 |
hemolymphoid system gland | 7.70e-13 | 4 |
thymic region | 7.70e-13 | 4 |
pharyngeal gland | 7.70e-13 | 4 |
thymus primordium | 7.70e-13 | 4 |
pharyngeal epithelium | 7.33e-09 | 6 |
hemopoietic organ | 1.02e-07 | 7 |
immune organ | 1.02e-07 | 7 |