FFCP PHASE1:Hg19::chr4:158745392..158745410,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C249|description=CAGE_peak_at_chr4:158745392..158745410,-|id=chr4:158745392..158745410,-|ontology_enrichment_celltype=CL:0000066!2.48e-18!254;CL:0002150!3.86e-12!3;CL:0000861!3.86e-12!3;CL:0002251!1.18e-09!21;CL:1000415!8.18e-09!2;CL:0000159!1.44e-08!2|ontology_enrichment_celltype_v019=CL:1000415;1.17e-20;2!CL:0002553;8.62e-12;1!CL:0000313;1.60e-11;1|ontology_enrichment_celltype_v019_2=CL:1000415,1.05e-20,2;CL:0002553,8.62e-12,1;CL:0000066,1.30e-11,253;CL:0000313,1.78e-11,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.46e-39!106;DOID:0050687!1.23e-28!143;DOID:162!2.01e-20!235;DOID:14566!8.67e-20!239;DOID:299!2.52e-19!25;DOID:1749!5.79e-12!14;DOID:3493!2.71e-08!2|ontology_enrichment_disease_v019=DOID:299;2.83e-14;25!DOID:2152;1.60e-11;1!DOID:305;9.60e-11;106!DOID:1749;6.70e-07;14|ontology_enrichment_disease_v019_2=DOID:305,5.79e-28,106;DOID:0050687,1.36e-22,143;DOID:299,2.70e-14,25;DOID:162,1.20e-12,235;DOID:14566,2.51e-12,239;DOID:2152,1.78e-11,1;DOID:1749,6.84e-07,14|ontology_enrichment_uberon=UBERON:0003343!5.07e-15!4;UBERON:0004785!5.07e-15!4;UBERON:0002294!1.04e-13!7;UBERON:0001173!1.04e-13!7;UBERON:0004912!1.04e-13!7;UBERON:0003729!4.94e-12!5;UBERON:0002110!6.04e-12!3;UBERON:0006242!6.04e-12!3;UBERON:0000344!1.66e-10!12;UBERON:0001007!2.66e-10!155;UBERON:0001555!2.66e-10!155;UBERON:0007026!2.66e-10!155;UBERON:0004119!6.11e-09!169;UBERON:0000925!6.11e-09!169;UBERON:0006595!6.11e-09!169;UBERON:0000077!3.84e-08!130;UBERON:0001004!9.21e-08!72;UBERON:0008947!1.68e-07!38;UBERON:0003258!1.68e-07!38;UBERON:0005911!9.84e-07!82|ontology_enrichment_uberon_v019=UBERON:0002294;3.56e-23;7!UBERON:0001173;3.56e-23;7!UBERON:0002110;4.14e-14;3!UBERON:0004911;1.60e-11;1!UBERON:0004913;1.60e-11;1!UBERON:0003703;1.60e-11;1!UBERON:0001174;1.60e-11;1!UBERON:0004914;1.60e-11;1!UBERON:0001301;2.42e-11;1!UBERON:0002394;3.29e-11;4!UBERON:0003928;3.29e-11;4!UBERON:0003343;6.65e-11;4!UBERON:0004785;6.65e-11;4!UBERON:0002423;6.16e-10;25!UBERON:0000058;1.01e-09;10!UBERON:0000974;1.47e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002294,3.92e-18,9;UBERON:0001173,3.92e-18,9;UBERON:0004912,3.92e-18,9;UBERON:0002110,3.87e-14,3;UBERON:0006242,3.87e-14,3;UBERON:0004913,1.45e-11,1;UBERON:0003703,1.45e-11,1;UBERON:0001174,1.45e-11,1;UBERON:0004914,1.45e-11,1;UBERON:0004911,1.78e-11,1;UBERON:0001301,2.68e-11,1;UBERON:0003343,7.35e-11,4;UBERON:0004785,7.35e-11,4;UBERON:0009497,5.93e-10,25;UBERON:0000015,5.93e-10,25;UBERON:0002423,5.93e-10,25;UBERON:0006235,5.93e-10,25;UBERON:0004161,5.93e-10,25;UBERON:0002394,8.95e-08,6;UBERON:0003928,8.95e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11134053551235,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72867758961949,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,2.36387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73375143661528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56148591426813,0,0,0.195984794828755,0,2.27144668714639,0,1.25783230675811,1.0232504392066,1.14961639874493,0,0,0,0,0,0,1.56441106187842,2.16428814679141,0.213452994739353,0.39961921916426,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0.226705925512272,0.463044948647668,0,0,0,0,0,0,1.52048196587765,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8176931968496,0,0,0,0,0,0,0,0,0,0,3.72961330303897,0.11796972334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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_at_chr4:158745392..158745410,- | |||
|id=chr4:158745392..158745410,- | |||
|ontology_enrichment_celltype=CL:0000066!2.48e-18!254;CL:0002150!3.86e-12!3;CL:0000861!3.86e-12!3;CL:0002251!1.18e-09!21;CL:1000415!8.18e-09!2;CL:0000159!1.44e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.17e-20;2!CL:0002553;8.62e-12;1!CL:0000313;1.60e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.05e-20,2;CL:0002553,8.62e-12,1;CL:0000066,1.30e-11,253;CL:0000313,1.78e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.46e-39!106;DOID:0050687!1.23e-28!143;DOID:162!2.01e-20!235;DOID:14566!8.67e-20!239;DOID:299!2.52e-19!25;DOID:1749!5.79e-12!14;DOID:3493!2.71e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:299;2.83e-14;25!DOID:2152;1.60e-11;1!DOID:305;9.60e-11;106!DOID:1749;6.70e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.79e-28,106;DOID:0050687,1.36e-22,143;DOID:299,2.70e-14,25;DOID:162,1.20e-12,235;DOID:14566,2.51e-12,239;DOID:2152,1.78e-11,1;DOID:1749,6.84e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003343!5.07e-15!4;UBERON:0004785!5.07e-15!4;UBERON:0002294!1.04e-13!7;UBERON:0001173!1.04e-13!7;UBERON:0004912!1.04e-13!7;UBERON:0003729!4.94e-12!5;UBERON:0002110!6.04e-12!3;UBERON:0006242!6.04e-12!3;UBERON:0000344!1.66e-10!12;UBERON:0001007!2.66e-10!155;UBERON:0001555!2.66e-10!155;UBERON:0007026!2.66e-10!155;UBERON:0004119!6.11e-09!169;UBERON:0000925!6.11e-09!169;UBERON:0006595!6.11e-09!169;UBERON:0000077!3.84e-08!130;UBERON:0001004!9.21e-08!72;UBERON:0008947!1.68e-07!38;UBERON:0003258!1.68e-07!38;UBERON:0005911!9.84e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;3.56e-23;7!UBERON:0001173;3.56e-23;7!UBERON:0002110;4.14e-14;3!UBERON:0004911;1.60e-11;1!UBERON:0004913;1.60e-11;1!UBERON:0003703;1.60e-11;1!UBERON:0001174;1.60e-11;1!UBERON:0004914;1.60e-11;1!UBERON:0001301;2.42e-11;1!UBERON:0002394;3.29e-11;4!UBERON:0003928;3.29e-11;4!UBERON:0003343;6.65e-11;4!UBERON:0004785;6.65e-11;4!UBERON:0002423;6.16e-10;25!UBERON:0000058;1.01e-09;10!UBERON:0000974;1.47e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,3.92e-18,9;UBERON:0001173,3.92e-18,9;UBERON:0004912,3.92e-18,9;UBERON:0002110,3.87e-14,3;UBERON:0006242,3.87e-14,3;UBERON:0004913,1.45e-11,1;UBERON:0003703,1.45e-11,1;UBERON:0001174,1.45e-11,1;UBERON:0004914,1.45e-11,1;UBERON:0004911,1.78e-11,1;UBERON:0001301,2.68e-11,1;UBERON:0003343,7.35e-11,4;UBERON:0004785,7.35e-11,4;UBERON:0009497,5.93e-10,25;UBERON:0000015,5.93e-10,25;UBERON:0002423,5.93e-10,25;UBERON:0006235,5.93e-10,25;UBERON:0004161,5.93e-10,25;UBERON:0002394,8.95e-08,6;UBERON:0003928,8.95e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11134053551235,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72867758961949,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,2.36387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73375143661528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56148591426813,0,0,0.195984794828755,0,2.27144668714639,0,1.25783230675811,1.0232504392066,1.14961639874493,0,0,0,0,0,0,1.56441106187842,2.16428814679141,0.213452994739353,0.39961921916426,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0.226705925512272,0.463044948647668,0,0,0,0,0,0,1.52048196587765,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8176931968496,0,0,0,0,0,0,0,0,0,0,3.72961330303897,0.11796972334774,1.10057159113007,0.231051332300676,0,0,0,0,0,0,0,0,3.84425824164318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.68732060563215,0,0,3.35566295393377,0.098150233615243,4.87671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.430333232356058,0,0.89543595472072,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:158745392..158745410,- | |||
}} |
Revision as of 03:01, 13 September 2013
Short description: | p@chr4:158745392..158745410, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:158745392..158745410, - |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.05e-20 | 2 |
lung fibroblast | 8.62e-12 | 1 |
epithelial cell | 1.30e-11 | 253 |
serous secreting cell | 1.78e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
biliary system | 3.92e-18 | 9 |
biliary tree | 3.92e-18 | 9 |
biliary bud | 3.92e-18 | 9 |
gallbladder | 3.87e-14 | 3 |
gall bladder primordium | 3.87e-14 | 3 |
hepatopancreatic ampulla | 1.45e-11 | 1 |
extrahepatic bile duct | 1.45e-11 | 1 |
common bile duct | 1.45e-11 | 1 |
duodenal papilla | 1.45e-11 | 1 |
epithelium of female gonad | 1.78e-11 | 1 |
epididymis | 2.68e-11 | 1 |
mucosa of oral region | 7.35e-11 | 4 |
respiratory system mucosa | 7.35e-11 | 4 |
epithelium of foregut-midgut junction | 5.93e-10 | 25 |
anatomical boundary | 5.93e-10 | 25 |
hepatobiliary system | 5.93e-10 | 25 |
foregut-midgut junction | 5.93e-10 | 25 |
septum transversum | 5.93e-10 | 25 |
bile duct | 8.95e-08 | 6 |
digestive system duct | 8.95e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.79e-28 | 106 |
cell type cancer | 1.36e-22 | 143 |
adenocarcinoma | 2.70e-14 | 25 |
cancer | 1.20e-12 | 235 |
disease of cellular proliferation | 2.51e-12 | 239 |
ovary epithelial cancer | 1.78e-11 | 1 |
squamous cell carcinoma | 6.84e-07 | 14 |
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