Personal tools

FFCP PHASE1:Mm9::chr17:31701800..31701818,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:31701800..31701818,+
|short_description=p2@Pknox1
|description=CAGE_peak_2_at_Pknox1_5end
|association_with_transcript=82bp_to_ENSMUST00000097352,NM_016670,NR_027493,uc008bvh.2,uc008bvi.2_5end
|EntrezGene=18771
|EntrezGene=18771
|HGNC=
|HGNC=
|UniProt=O70477
|UniProt=O70477
|association_with_transcript=82bp_to_ENSMUST00000097352,NM_016670,NR_027493,uc008bvh.2,uc008bvi.2_5end
|description=CAGE_peak_2_at_Pknox1_5end
|id=chr17:31701800..31701818,+
|ontology_enrichment_disease=
|phase1_expression=0.960893082628764,2.79180326111489,3.18499467572675,3.93203474698879,3.00537437967808,2.51818907867835,2.10251376535973,7.23090611272827,7.46180227403834,7.49006484230379,5.30775701499065,2.95156988282745,12.1552518251156,9.17914225399473,1.33243904726265,1.41732687172878,2.09868563438444,4.57420139769445,3.56497527374921,5.51706547337439,1.7008658030214,2.87943758482567,3.91799683708403,1.59992422793407,2.98232065387321,1.14846392823004,0.430761996159075,1.72376986148711,1.71021077510736,1.26015064879965,1.33038306393183,0,1.84519436275371,0,1.1554064790051,1.16364251750945,1.02084678131185,2.92972141515835,2.3440060335714,2.09409497589519,2.94115744015507,2.73218193983378,2.42755176515577,0.251793635951155,0.709638518536602,0.367093504323363,0,0.218025156380447,0.219686182734472,1.1665793944457,0.699932108126813,0,9.56360854529097,16.6833292662609,21.1739093459752,0.514518872071894,0.573066879877513,1.03134418455488,1.01158230429799,3.1739458756322,0.633831403506179,2.03306719241479,0,2.2497492932035,1.97773272513395,0.7104801149461,0.898800331555214,0.384218305321555,1.65903379693564,1.35005938331691,1.26194976810829,1.99955689082663,3.09215957332259,2.9397791811589,2.58782771749238,3.67687514644008,0,0.638436690425939,0.46081959976873,1.97829431595291,1.64677758484337,1.56274011167028,0.837548997004143,0,0.61119299110724,3.24091444021034,1.70846016958924,2.98239113320481,1.13589289999776,1.20914496170857,1.44932244350839,2.58127163094416,0.679971333707751,0.539703191637817,2.59910566979068,0.448026887097336,1.68533304158102,0.681721290312231,1.81850203222008,0.70667914902068,1.26759077799012,2.56652954828636,0,0,0.649473123033642,0.506719730950197,1.01104889002957,1.25602267690966,4.40194402200192,1.03909497345377,1.56136794089522,1.21786191324856,1.38369298353635,0.452167921657868,1.41106448562846,0.628332956648377,2.71914464507811,1.15679485535929,6.19227386364912,1.29413479957927,3.09178125844551,2.42437626567611,0,3.51336956413857,1.67557365450764,1.27728527604296,0.718890747035522,1.79970819298022,0.889491589511453,1.04853447583376,0.915001205637253,2.01046963380583,0.347648640384553,1.02286182932132,1.0389402227978,1.94689515681309,0.916554274652847,3.35898820647251,2.27450482590307,2.10441855886474,0.780722657776222,1.83921683546778,1.44049703844279,1.65775299619287,2.24520447199382,2.69038812598185,2.90475346135159,2.32833033665114,2.80238390812695,2.45837904218165,2.63926686245923,1.7535658594206,2.50242524303038,1.74126083261083,1.23469281844766,0.398068533636986,0.702213187313235,2.05878325691772,1.13665399758237,1.44988040774851,0.234526059981096,1.98068267607116,1.18372367792605,0.393528463494808,0.462801338662135,1.16266972375204,1.60964040839772,1.5179494507732,0.16455984991348,1.31333971263276,0.972825714550269,2.19299981137998,0.219550115291051,2.01309628140558,0.630869845692382,1.85228302282712,2.97376904685418,1.58670339998127,1.49301775374664,2.32236671860439,1.28867461322093,1.21010114774006,3.55804870151792,1.14135375667535,1.89811624617805,0.823494773620054,0.754005626400808,0.795825888164603,1.16978452271472,3.59527763461689,1.72910439899755,0.995706366271836,1.13800740571849,1.5994791765362,0,1.01825663922657,2.13347735884388,1.75339549725796,2.52946148497029,2.21415221969403,2.19798218977925,2.46794327843601,1.48226313543574,1.33476084572875,1.17935397067922,1.12431056192427,1.21716072833102,1.68824011826692,0.50925170356284,1.43848068725405,1.45921704097532,0.823684239564244,2.87536413054709,1.11642284300551,1.5601883655728,1.76805214562978,1.4351793081753,1.4473305640901,0.739012760666419,0.568474235311454,1.95557971730431,1.86719594352707,1.87752198630802,2.84760637651087,3.33261097240419,2.92700471786698,3.15270288212382,1.99318220683897,3.34855014180723,2.45794972073607,1.89953480052485,2.60368305446721,0,0.54390568381871,1.96705709207614,1.10374698521893,1.60550589987792,1.52375192569864,0.819674726883377,0.504941854408746,1.57754109708128,3.90438744296638,3.23135096599198,1.43381278771531,1.78238939265915,1.13230612315533,2.83367491172426,1.75353514746787,4.34816555741176,0.963963949265421,1.70328102249922,0.534196811001766,0.325773918707152,2.3095817216155,1.32745138339963,0.971122544619926,3.32555912661226,0.377210159511796,1.18120757152309,0.307435147943927,1.03371317267288,1.45413491791002,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,1.36175842301515,1.62054984628179,0.776152102696527,0.857348140126369,1.06404140185364,1.24858172321449,1.64549020602121,0.913394847343798,0.23467170806371,2.54198485036584,1.98475558249466,3.13283880588812,1.61464426695906,1.86970067277283,2.38744688006273,2.46211349617592,1.45740418314925,1.8542530201051,3.07567585436135,0.82554747185289,2.03713980106683,2.63715839806567,1.50363650493128,2.74533807847827,0.509935289981566,1.39951452323658,0.967399816630967,0,1.58167996790568,0.813277868507395,1.62008011232702,1.04544148007234,0.436725127492355,0.809186078308924,1.57041565878138,0.785267825952089,1.29614973291793,0.621339313086926,1.69107881605257,1.19613236835183,1.15820943319968,1.55560950675238,0.774958940866387,1.01373675294467,1.29092962510329,1.5624526181274,1.78260885523708,1.44950472495604,3.74439008135225,11.6924114632426,1.21635129174099,1.1298205288131,2.33857481360031,5.54982756569192,3.57626438606277,5.4087952283986,5.02144392393563,7.77441664600737,8.23033511873998,10.3850970690946,9.06358290879698,10.0060315305943,13.3239668486989,2.26730383615211,1.99787358036658,0.358855426437903,0.503653849092235,1.35232715822533,0.93841237725591,0.73260649706906,0.857473516316263,4.01257683228291,0.564751842617067,0,0,0.859265911718438,0,0,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,1.03787347584177,1.19707462020309,2.21953687480374,1.94485373654635,0.838452650511929,1.47074806760011,0.666740183404846,0.824140228955577,1.60459604795908,0.758091635291392,1.2673964994512,1.69763707247469,1.31098110457835,1.28050304809739,1.26358031702349,0.952587382566147,1.50649623728312,0.77163688185482,1.64834360321323,2.20798380201596,1.71434626192708,2.12970967391205,2.38436189947321,0.872078499793971,1.03520318456864,1.52306294205018,1.09756783723664,1.31534855718921,1.90125759384206,2.24456908663095,1.30498519936592,2.36410757701352,1.63692417267876,1.54936841185966,1.54325288784913,1.24905288968973,1.63752125911786,1.50409737833809,0.956441660344217,1.10295709559758,1.85494268496337
|phase1_expression=0.960893082628764,2.79180326111489,3.18499467572675,3.93203474698879,3.00537437967808,2.51818907867835,2.10251376535973,7.23090611272827,7.46180227403834,7.49006484230379,5.30775701499065,2.95156988282745,12.1552518251156,9.17914225399473,1.33243904726265,1.41732687172878,2.09868563438444,4.57420139769445,3.56497527374921,5.51706547337439,1.7008658030214,2.87943758482567,3.91799683708403,1.59992422793407,2.98232065387321,1.14846392823004,0.430761996159075,1.72376986148711,1.71021077510736,1.26015064879965,1.33038306393183,0,1.84519436275371,0,1.1554064790051,1.16364251750945,1.02084678131185,2.92972141515835,2.3440060335714,2.09409497589519,2.94115744015507,2.73218193983378,2.42755176515577,0.251793635951155,0.709638518536602,0.367093504323363,0,0.218025156380447,0.219686182734472,1.1665793944457,0.699932108126813,0,9.56360854529097,16.6833292662609,21.1739093459752,0.514518872071894,0.573066879877513,1.03134418455488,1.01158230429799,3.1739458756322,0.633831403506179,2.03306719241479,0,2.2497492932035,1.97773272513395,0.7104801149461,0.898800331555214,0.384218305321555,1.65903379693564,1.35005938331691,1.26194976810829,1.99955689082663,3.09215957332259,2.9397791811589,2.58782771749238,3.67687514644008,0,0.638436690425939,0.46081959976873,1.97829431595291,1.64677758484337,1.56274011167028,0.837548997004143,0,0.61119299110724,3.24091444021034,1.70846016958924,2.98239113320481,1.13589289999776,1.20914496170857,1.44932244350839,2.58127163094416,0.679971333707751,0.539703191637817,2.59910566979068,0.448026887097336,1.68533304158102,0.681721290312231,1.81850203222008,0.70667914902068,1.26759077799012,2.56652954828636,0,0,0.649473123033642,0.506719730950197,1.01104889002957,1.25602267690966,4.40194402200192,1.03909497345377,1.56136794089522,1.21786191324856,1.38369298353635,0.452167921657868,1.41106448562846,0.628332956648377,2.71914464507811,1.15679485535929,6.19227386364912,1.29413479957927,3.09178125844551,2.42437626567611,0,3.51336956413857,1.67557365450764,1.27728527604296,0.718890747035522,1.79970819298022,0.889491589511453,1.04853447583376,0.915001205637253,2.01046963380583,0.347648640384553,1.02286182932132,1.0389402227978,1.94689515681309,0.916554274652847,3.35898820647251,2.27450482590307,2.10441855886474,0.780722657776222,1.83921683546778,1.44049703844279,1.65775299619287,2.24520447199382,2.69038812598185,2.90475346135159,2.32833033665114,2.80238390812695,2.45837904218165,2.63926686245923,1.7535658594206,2.50242524303038,1.74126083261083,1.23469281844766,0.398068533636986,0.702213187313235,2.05878325691772,1.13665399758237,1.44988040774851,0.234526059981096,1.98068267607116,1.18372367792605,0.393528463494808,0.462801338662135,1.16266972375204,1.60964040839772,1.5179494507732,0.16455984991348,1.31333971263276,0.972825714550269,2.19299981137998,0.219550115291051,2.01309628140558,0.630869845692382,1.85228302282712,2.97376904685418,1.58670339998127,1.49301775374664,2.32236671860439,1.28867461322093,1.21010114774006,3.55804870151792,1.14135375667535,1.89811624617805,0.823494773620054,0.754005626400808,0.795825888164603,1.16978452271472,3.59527763461689,1.72910439899755,0.995706366271836,1.13800740571849,1.5994791765362,0,1.01825663922657,2.13347735884388,1.75339549725796,2.52946148497029,2.21415221969403,2.19798218977925,2.46794327843601,1.48226313543574,1.33476084572875,1.17935397067922,1.12431056192427,1.21716072833102,1.68824011826692,0.50925170356284,1.43848068725405,1.45921704097532,0.823684239564244,2.87536413054709,1.11642284300551,1.5601883655728,1.76805214562978,1.4351793081753,1.4473305640901,0.739012760666419,0.568474235311454,1.95557971730431,1.86719594352707,1.87752198630802,2.84760637651087,3.33261097240419,2.92700471786698,3.15270288212382,1.99318220683897,3.34855014180723,2.45794972073607,1.89953480052485,2.60368305446721,0,0.54390568381871,1.96705709207614,1.10374698521893,1.60550589987792,1.52375192569864,0.819674726883377,0.504941854408746,1.57754109708128,3.90438744296638,3.23135096599198,1.43381278771531,1.78238939265915,1.13230612315533,2.83367491172426,1.75353514746787,4.34816555741176,0.963963949265421,1.70328102249922,0.534196811001766,0.325773918707152,2.3095817216155,1.32745138339963,0.971122544619926,3.32555912661226,0.377210159511796,1.18120757152309,0.307435147943927,1.03371317267288,1.45413491791002,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,1.36175842301515,1.62054984628179,0.776152102696527,0.857348140126369,1.06404140185364,1.24858172321449,1.64549020602121,0.913394847343798,0.23467170806371,2.54198485036584,1.98475558249466,3.13283880588812,1.61464426695906,1.86970067277283,2.38744688006273,2.46211349617592,1.45740418314925,1.8542530201051,3.07567585436135,0.82554747185289,2.03713980106683,2.63715839806567,1.50363650493128,2.74533807847827,0.509935289981566,1.39951452323658,0.967399816630967,0,1.58167996790568,0.813277868507395,1.62008011232702,1.04544148007234,0.436725127492355,0.809186078308924,1.57041565878138,0.785267825952089,1.29614973291793,0.621339313086926,1.69107881605257,1.19613236835183,1.15820943319968,1.55560950675238,0.774958940866387,1.01373675294467,1.29092962510329,1.5624526181274,1.78260885523708,1.44950472495604,3.74439008135225,11.6924114632426,1.21635129174099,1.1298205288131,2.33857481360031,5.54982756569192,3.57626438606277,5.4087952283986,5.02144392393563,7.77441664600737,8.23033511873998,10.3850970690946,9.06358290879698,10.0060315305943,13.3239668486989,2.26730383615211,1.99787358036658,0.358855426437903,0.503653849092235,1.35232715822533,0.93841237725591,0.73260649706906,0.857473516316263,4.01257683228291,0.564751842617067,0,0,0.859265911718438,0,0,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,1.03787347584177,1.19707462020309,2.21953687480374,1.94485373654635,0.838452650511929,1.47074806760011,0.666740183404846,0.824140228955577,1.60459604795908,0.758091635291392,1.2673964994512,1.69763707247469,1.31098110457835,1.28050304809739,1.26358031702349,0.952587382566147,1.50649623728312,0.77163688185482,1.64834360321323,2.20798380201596,1.71434626192708,2.12970967391205,2.38436189947321,0.872078499793971,1.03520318456864,1.52306294205018,1.09756783723664,1.31534855718921,1.90125759384206,2.24456908663095,1.30498519936592,2.36410757701352,1.63692417267876,1.54936841185966,1.54325288784913,1.24905288968973,1.63752125911786,1.50409737833809,0.956441660344217,1.10295709559758,1.85494268496337
|short_description=p2@Pknox1
}}
}}

Revision as of 01:42, 18 April 2012

Short description:p2@Pknox1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pknox1_5end
Coexpression cluster:NA
Association with transcript: 82bp_to_ENSMUST00000097352, NM_016670, NR_027493, uc008bvh.2, uc008bvi.2_5end
EntrezGene:Pknox1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pknox1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E412.16
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.18
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A121.17
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.36
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D52.53
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.87
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B511.69
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C15.55
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F85.41
thymus, neonate N03.CNhs11137.2104-43C75.02
thymus, neonate N06.CNhs11197.681-26C47.77
thymus, neonate N07.CNhs11211.713-19D38.23
thymus, neonate N10.CNhs11194.748-24E410.39
thymus, neonate N20.CNhs11186.820-7A29.06
thymus, neonate N25.CNhs11125.1362-25G710.01
thymus, neonate N30.CNhs11132.1393-42G213.32
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:31701800..31701818,%2B&oldid=799517"