FFCP PHASE2:Hg19::chr17:48263174..48263189,-
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Short description: | p2@COL1A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL1A1_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | -234bp_to_M32790, M32798_5end |
EntrezGene: | COL1A1 |
HGNC: | 2197 |
UniProt: | P02452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@COL1A1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.38e-28 | 76 |
muscle precursor cell | 5.54e-16 | 58 |
myoblast | 5.54e-16 | 58 |
multi-potent skeletal muscle stem cell | 5.54e-16 | 58 |
muscle cell | 2.47e-15 | 55 |
electrically responsive cell | 2.11e-14 | 61 |
electrically active cell | 2.11e-14 | 61 |
smooth muscle cell | 8.46e-12 | 43 |
smooth muscle myoblast | 8.46e-12 | 43 |
multi fate stem cell | 1.77e-11 | 427 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
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epithelial vesicle | 3.11e-17 | 78 |
somite | 7.76e-17 | 71 |
presomitic mesoderm | 7.76e-17 | 71 |
presumptive segmental plate | 7.76e-17 | 71 |
dermomyotome | 7.76e-17 | 71 |
trunk paraxial mesoderm | 7.76e-17 | 71 |
dense mesenchyme tissue | 8.65e-17 | 73 |
paraxial mesoderm | 3.01e-16 | 72 |
presumptive paraxial mesoderm | 3.01e-16 | 72 |
skeletal muscle tissue | 9.87e-16 | 62 |
Showing 1 to 10 of 27 entries