FFCP PHASE2:Hg19::chr17:48277133..48277317,-
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Short description: | p4@COL1A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL1A1_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 234bp_to_ENST00000507689_5end |
EntrezGene: | COL1A1 |
HGNC: | 2197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@COL1A1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 1.77e-22 | 76 |
muscle precursor cell | 2.61e-16 | 58 |
myoblast | 2.61e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.61e-16 | 58 |
muscle cell | 1.11e-15 | 55 |
electrically responsive cell | 3.52e-13 | 61 |
electrically active cell | 3.52e-13 | 61 |
smooth muscle cell | 3.40e-12 | 43 |
smooth muscle myoblast | 3.40e-12 | 43 |
vascular associated smooth muscle cell | 1.62e-08 | 32 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
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epithelial vesicle | 4.98e-17 | 78 |
somite | 7.59e-17 | 71 |
presomitic mesoderm | 7.59e-17 | 71 |
presumptive segmental plate | 7.59e-17 | 71 |
dermomyotome | 7.59e-17 | 71 |
trunk paraxial mesoderm | 7.59e-17 | 71 |
dense mesenchyme tissue | 8.71e-17 | 73 |
paraxial mesoderm | 3.33e-16 | 72 |
presumptive paraxial mesoderm | 3.33e-16 | 72 |
skeletal muscle tissue | 3.94e-16 | 62 |
Showing 1 to 10 of 21 entries