FFCP PHASE2:Mm9::chr10:75384307..75384370,-
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Short description: | p1@Smarcb1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Smarcb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 0bp_to_ENSMUST00000000925, ENSMUST00000121304, ENSMUST00000140388, ENSMUST00000169174, NM_001161853, NM_011418, uc007ftm.2, uc007ftn.2, uc011xgt.1_5end |
EntrezGene: | Smarcb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@Smarcb1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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ectodermal cell | 6.56e-16 | 44 |
neurectodermal cell | 6.56e-16 | 44 |
neural cell | 7.19e-16 | 43 |
electrically responsive cell | 6.03e-14 | 39 |
electrically active cell | 6.03e-14 | 39 |
neuron | 2.50e-13 | 33 |
neuronal stem cell | 2.50e-13 | 33 |
neuroblast | 2.50e-13 | 33 |
electrically signaling cell | 2.50e-13 | 33 |
CNS neuron (sensu Vertebrata) | 4.66e-10 | 23 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
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central nervous system | 6.44e-21 | 73 |
nervous system | 1.07e-19 | 75 |
ectoderm-derived structure | 3.79e-17 | 95 |
ectoderm | 3.79e-17 | 95 |
presumptive ectoderm | 3.79e-17 | 95 |
neurectoderm | 9.41e-16 | 64 |
neural plate | 9.41e-16 | 64 |
presumptive neural plate | 9.41e-16 | 64 |
regional part of nervous system | 2.99e-13 | 54 |
ecto-epithelium | 3.93e-13 | 73 |
Showing 1 to 10 of 30 entries