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Difference between revisions of "FF:10399-106A3"

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{{f5samples
 
{{f5samples
|id=FF:10399-106A3
+
|DRA_sample_Accession=CAGE@SAMD00005753
|name=acute myeloid leukemia (FAB M5) cell line:THP-1, biol_rep3, tech_rep1 (fresh)
+
|accession_numbers=CAGE;DRX007813;DRR008685;DRZ000110;DRZ001495;DRZ011460;DRZ012845
|sample_age=1
+
|ancestors_in_anatomy_facet=
|sample_species=Human (Homo sapiens)
+
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000576
|sample_sex=male
+
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240,DOID:8692
|sample_tissue=blood
+
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0101370,FF:0101035,FF:0101883,FF:0102332,FF:0100740
|sample_cell_line=THP-1
+
|comment=
|sample_cell_type=monoblast
+
|created_by=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
+
|creation_date=
|sample_cell_catalog=
+
|data_phase=2
|sample_company=
+
|datafreeze_phase=2
|sample_id=10399
+
|def=
|sample_disease=acute myeloid leukemia (FAB M5)
+
|expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.52!327.21!IRF8;;chr11:47400078..47400106,-!p1@SPI1!2.31!202.16!SPI1;;chr6:135502501..135502546,+!p1@MYB!2.02!124.13!MYB;;chr2:68592406..68592424,+!p1@PLEK!1.92!82.65!PLEK;;chr9:96717629..96717644,-!p1@BARX1!1.82!65.75!BARX1;;chr19:33793430..33793447,-!p1@CEBPA!1.80!249.79!CEBPA;;chr12:54778471..54778528,-!p1@ZNF385A!1.74!54.38!ZNF385A;;chr2:63277948..63277974,+!p1@OTX1!1.72!51.00!OTX1;;chr1:92951607..92951661,-!p1@GFI1!1.67!45.78!GFI1;;chr7:115670804..115670825,-!p1@TFEC!1.67!45.47!TFEC;;chr3:18486354..18486377,-!p2@SATB1!1.65!54.69!SATB1;;chr6:135502408..135502459,+!p2@MYB!1.62!47.01!MYB;;chr13:72441315..72441454,-!p1@DACH1!1.57!70.36!DACH1;;chr1:92949331..92949377,-!p2@GFI1!1.53!32.57!GFI1;;chr10:31288398..31288455,-!p2@ZNF438!1.51!35.95!ZNF438;;chr2:175199675..175199688,+!p1@SP9!1.51!31.03!SP9;;chr7:50344289..50344323,+!p1@IKZF1!1.50!30.42!IKZF1;;chr1:156460436..156460462,-!p7@MEF2D!1.49!30.11!MEF2D;;chr1:50889103..50889145,-!p1@DMRTA2!1.46!27.65!DMRTA2;;chr11:47400062..47400077,-!p2@SPI1!1.44!26.42!SPI1;;chr2:200322654..200322707,-!p2@SATB2!1.43!37.18!SATB2;;chr6:135516877..135516900,+!p5@MYB!1.43!25.81!MYB;;chr1:41157363..41157416,+!p1@NFYC!1.42!460.86!NFYC;;chr1:41157421..41157482,+!p2@NFYC!1.40!266.99!NFYC;;chr6:85473156..85473210,-!p2@TBX18!1.39!28.27!TBX18;;chr7:137620650..137620677,-!p3@CREB3L2!1.39!23.35!CREB3L2;;chr5:72744594..72744609,-!p1@FOXD1!1.35!95.24!FOXD1;;chr7:137620684..137620711,-!p4@CREB3L2!1.34!20.89!CREB3L2;;chr7:27205106..27205134,-!p2@HOXA9!1.33!20.28!HOXA9;;chr1:40942922..40942997,+!p1@ZNF642!1.31!50.08!ZNF642;;chr7:113726357..113726443,+!p1@FOXP2!1.31!33.49!FOXP2;;chr2:63277978..63277995,+!p2@OTX1!1.29!18.43!OTX1;;chr2:145277640..145277771,-!p1@ZEB2!1.28!238.11!ZEB2;;chr6:34204973..34204990,+!p4@HMGA1!1.28!236.58!HMGA1;;chr7:27205136..27205164,-!p1@HOXA9!1.28!18.13!HOXA9;;chr1:156470515..156470542,-!p2@MEF2D!1.27!90.02!MEF2D;;chr3:157824001..157824078,-!p2@SHOX2!1.27!17.51!SHOX2;;chr5:88178983..88179012,-!p1@MEF2C!1.26!130.88!MEF2C;;chr1:40997285..40997352,+!p1@ZNF684!1.26!59.91!ZNF684;;chr7:27213893..27213954,-!p1@HOXA10!1.26!17.21!HOXA10;;chr1:40997363..40997392,+!p2@ZNF684!1.25!21.81!ZNF684;;chr6:135502472..135502489,+!p3@MYB!1.25!16.90!MYB;;chr14:75988771..75988826,+!p1@BATF!1.24!21.81!BATF;;chr7:50343634..50343717,+!p2@IKZF1!1.23!15.98!IKZF1;;chr3:157824202..157824211,-!p3@SHOX2!1.22!15.67!SHOX2;;chr18:22805268..22805280,-!p8@ZNF521!1.21!15.36!ZNF521;;chr7:27224795..27224840,-!p2@HOXA11!1.21!15.05!HOXA11;;chr7:27224842..27224872,-!p1@HOXA11!1.20!14.75!HOXA11;;chr11:47399996..47400014,-!p4@SPI1!1.20!14.75!SPI1;;chr1:247242048..247242098,-!p1@ZNF670,p1@ZNF695!1.19!51.92!ZNF670;;chr7:128577972..128578047,+!p1@IRF5!1.19!23.04!IRF5;;chr16:54320646..54320672,-!p2@IRX3!1.19!22.12!IRX3;;chr18:22932080..22932170,-!p1@ZNF521!1.17!58.38!ZNF521;;chr16:54320617..54320643,-!p3@IRX3!1.17!17.51!IRX3;;chr1:92952473..92952489,-!p3@GFI1!1.17!13.83!GFI1;;chr13:41593425..41593480,-!p1@ELF1!1.12!77.73!ELF1;;chr1:247171316..247171336,-!p3@ZNF695!1.12!18.43!ZNF695;;chr6:135516909..135516925,+!p6@MYB!1.12!12.29!MYB;;chr2:175199697..175199706,+!p2@SP9!1.11!11.98!SP9;;chr18:55102598..55102623,+!p1@ONECUT2!1.11!11.98!ONECUT2;;chr20:42295745..42295765,+!p1@MYBL2!1.10!188.65!MYBL2;;chr1:167298300..167298319,+!p2@POU2F1!1.10!11.68!POU2F1;;chr11:47399947..47399961,-!p3@SPI1!1.09!11.37!SPI1;;chr13:72441074..72441172,-!p2@DACH1!1.09!11.37!DACH1;;chr2:100759037..100759058,-!p2@AFF3!1.09!11.37!AFF3;;chr17:41277372..41277418,-!p1@BRCA1!1.07!39.02!BRCA1;;chrY:21906594..21906622,-!p1@KDM5D!1.07!10.75!KDM5D;;chr1:156460473..156460486,-!p12@MEF2D!1.06!10.45!MEF2D;;chr1:3569072..3569093,+!p1@TP73!1.06!10.45!TP73;;chr3:18480217..18480239,-!p3@SATB1!1.06!10.45!SATB1;;chr7:27239703..27239715,-!p1@HOXA13!1.05!10.14!HOXA13;;chr21:34442439..34442455,+!p1@OLIG1!1.05!10.14!OLIG1;;chr10:31288370..31288393,-!p3@ZNF438!1.05!10.14!ZNF438;;chr15:57511609..57511651,+!p2@TCF12!1.04!16.90!TCF12;;chr20:42295713..42295738,+!p2@MYBL2!1.03!58.38!MYBL2;;chr16:54320675..54320715,-!p1@IRX3!1.02!20.59!IRX3;;chr17:79881332..79881348,-!p3@MAFG!1.02!14.13!MAFG;;chr16:54320158..54320200,-!p5@IRX3!1.02!13.83!IRX3;;chr16:54319010..54319041,-!p8@IRX3!1.02!9.52!IRX3;;chr18:55102628..55102646,+!p2@ONECUT2!1.02!9.52!ONECUT2;;chr2:200322229..200322251,-!p3@SATB2!1.02!9.52!SATB2;;chr11:47400032..47400043,-!p5@SPI1!1.01!9.22!SPI1;;chr1:167298384..167298412,+!p3@POU2F1!1.01!9.22!POU2F1;;chr1:92949505..92949543,-!p5@GFI1!1.00!8.91!GFI1;;chr1:156470494..156470505,-!p3@MEF2D!0.99!12.90!MEF2D;;chr2:68592394..68592405,+!p2@PLEK!0.98!8.60!PLEK;;chr7:113726226..113726245,+!p3@FOXP2!0.98!8.60!FOXP2;;chr7:27239740..27239759,-!p2@HOXA13!0.97!8.30!HOXA13;;chr3:18467290..18467311,-!p8@SATB1!0.97!8.30!SATB1;;chr11:128563948..128564003,+!p1@FLI1!0.96!100.16!FLI1;;chr19:13213662..13213686,-!p1@LYL1!0.96!12.29!LYL1;;chr16:54320280..54320291,-!p9@IRX3!0.95!7.99!IRX3;;chr7:19157248..19157268,-!p1@TWIST1!0.94!21.81!TWIST1;;chr7:50344251..50344288,+!p3@IKZF1!0.94!7.68!IKZF1;;chr11:47400045..47400060,-!p6@SPI1!0.94!7.68!SPI1;;chr20:21378152..21378169,-!p1@NKX2-4!0.94!7.68!NKX2-4;;chr17:48072574..48072597,-!p1@DLX3!0.92!7.37!DLX3;;chr1:40627038..40627071,+!p1@RLF!0.91!97.09!RLF;;chr3:71630980..71631110,-!p3@FOXP1!0.91!26.12!FOXP1;;chr2:102091566..102091581,-!p1@RFX8!0.91!7.07!RFX8;;chr1:41157266..41157314,+!p3@NFYC!0.90!62.06!NFYC;;chr2:145277882..145277967,-!p3@ZEB2!0.90!12.29!ZEB2;;chr1:247171347..247171366,-!p2@ZNF695!0.89!12.60!ZNF695;;chr12:54694758..54694805,-!p1@NFE2!0.89!8.30!NFE2;;chrY:21906761..21906810,-!p2@KDM5D!0.89!6.76!KDM5D;;chr21:36421535..36421610,-!p2@RUNX1!0.88!24.58!RUNX1;;chr9:126774018..126774055,+!p1@LHX2!0.87!6.45!LHX2;;chr10:135044190..135044229,+!p3@UTF1!0.87!6.45!UTF1;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.86!30.42!TAL1;;chr19:20011744..20011770,+!p1@ZNF93!0.86!25.50!ZNF93;;chr8:145669791..145669834,-!p1@TONSL!0.86!19.05!TONSL;;chr2:185463247..185463263,+!p1@ZNF804A!0.85!11.06!ZNF804A;;chr1:41157641..41157665,+!p7@NFYC!0.85!7.99!NFYC;;chr19:13213954..13214021,-!p4@LYL1!0.85!6.14!LYL1;;chr19:22605097..22605121,-!p2@ZNF98!0.85!6.14!ZNF98;;chr19:23299814..23299844,+!p1@ZNF730!0.84!7.37!ZNF730;;chr19:20011775..20011800,+!p2@ZNF93!0.83!10.75!ZNF93;;chr1:221052733..221052749,+!p2@HLX!0.83!7.68!HLX;;chr3:157823517..157823562,-!p1@SHOX2!0.83!6.14!SHOX2;;chr2:145275982..145276003,-!p7@ZEB2!0.83!5.84!ZEB2;;chr2:200320768..200320800,-!p4@SATB2!0.83!5.84!SATB2;;chr18:22804637..22804660,-!p10@ZNF521!0.83!5.84!ZNF521;;chr18:22932004..22932021,-!p2@ZNF521!0.83!5.84!ZNF521;;chr12:54694807..54694832,-!p3@NFE2!0.83!5.84!NFE2;;chr16:54964740..54964789,+!p1@IRX5!0.82!8.30!IRX5;;chr10:22292591..22292606,-!p2@DNAJC1!0.81!9.22!DNAJC1;;chr1:41204530..41204541,+!p8@NFYC!0.81!6.76!NFYC;;chr2:145275947..145275981,-!p10@ZEB2!0.81!5.53!ZEB2;;chr13:100634031..100634045,+!p1@ZIC2!0.81!5.53!ZIC2;;chr5:122424918..122424944,+!p1@PRDM6!0.81!5.53!PRDM6;;chr19:20011731..20011743,+!p3@ZNF93!0.80!7.07!ZNF93;;chr1:25256756..25256774,-!p1@RUNX3!0.79!10.14!RUNX3;;chrX:66763856..66763896,+!p1@AR!0.79!7.68!AR;;chr19:2867298..2867317,+!p2@ZNF556!0.79!5.22!ZNF556;;chr16:54320101..54320125,-!p4@IRX3!0.78!7.37!IRX3;;chr5:321810..321877,+!p1@AHRR!0.77!16.59!AHRR;;chr6:144385698..144385742,-!p2@PLAGL1!0.77!6.14!PLAGL1;;chr8:65492915..65492932,+!p1@BHLHE22!0.77!4.92!BHLHE22;;chr19:22605136..22605154,-!p1@ZNF98!0.77!4.92!ZNF98;;chr19:50922187..50922204,+!p1@SPIB!0.77!4.92!SPIB;;chr7:64838786..64838809,+!p2@ZNF92!0.75!28.88!ZNF92;;chr7:114054885..114054910,+!p4@FOXP2!0.75!4.61!FOXP2;;chr7:35293685..35293718,-!p1@TBX20!0.75!4.61!TBX20;;chr1:156460402..156460417,-!p22@MEF2D!0.75!4.61!MEF2D;;chr3:138665937..138665968,-!p1@FOXL2!0.75!4.61!FOXL2;;chr3:18487057..18487105,-!p4@SATB1!0.75!4.61!SATB1;;chr7:64363638..64363667,+!p1@ZNF273!0.74!24.89!ZNF273;;chr19:22817119..22817145,+!p1@ZNF492!0.74!7.99!ZNF492;;chr1:221052994..221053008,+!p6@HLX!0.73!5.22!HLX;;chr19:21950332..21950356,-!p2@ZNF100!0.72!9.83!ZNF100;;chr1:40367530..40367597,-!p1@MYCL1!0.72!8.30!MYCL1;;chr20:50159198..50159299,-!p1@NFATC2!0.72!6.45!NFATC2;;chr19:13213704..13213726,-!p3@LYL1!0.72!5.84!LYL1;;chr16:88497018..88497035,+!p@chr16:88497018..88497035,+!0.72!4.30!ZNF469;;chr5:71803177..71803255,-!p1@ZNF366!0.72!4.30!ZNF366;;chr5:88120151..88120177,-!p6@MEF2C!0.72!4.30!MEF2C;;chr9:1050331..1050363,+!p1@DMRT2!0.72!4.30!DMRT2;;chrY:2803415..2803468,+!p1@ZFY!0.72!4.30!ZFY;;chr2:100759010..100759035,-!p1@AFF3!0.72!4.30!AFF3;;chr2:200322711..200322722,-!p10@SATB2!0.72!4.30!SATB2;;chr2:200322723..200322739,-!p6@SATB2!0.72!4.30!SATB2;;chr21:34442540..34442560,+!p2@OLIG1!0.72!4.30!OLIG1;;chr1:43148059..43148108,+!p1@YBX1!0.71!300.79!YBX1;;chr2:60780607..60780624,-!p2@BCL11A!0.71!14.13!BCL11A;;chr1:45805872..45805900,+!p2@TOE1!0.71!10.75!TOE1;;chr4:87857474..87857489,+!p7@AFF1!0.71!7.68!AFF1;;chr16:29818160..29818188,+!p6@MAZ!0.70!21.20!MAZ;;chr5:88179017..88179046,-!p2@MEF2C!0.70!17.82!MEF2C;;chr1:40915725..40915808,+!p1@ZNF643!0.70!13.21!ZNF643;;chr2:208031943..208031978,-!p5@KLF7!0.70!5.53!KLF7;;chr20:21378129..21378142,-!p2@NKX2-4!0.70!3.99!NKX2-4;;chr6:135513595..135513617,+!p4@MYB!0.70!3.99!MYB;;chr11:19262461..19262476,-!p5@E2F8!0.70!3.99!E2F8;;chr11:32457075..32457095,-!p1@WT1!0.70!3.99!WT1;;chr9:137217986..137218049,+!p3@RXRA!0.69!12.29!RXRA;;chr2:71127699..71127744,+!p1@VAX2!0.69!8.60!VAX2;;chr1:23857698..23857733,-!p1@E2F2!0.69!7.68!E2F2;;chr1:41157326..41157337,+!p5@NFYC!0.69!6.45!NFYC;;chr6:45390269..45390298,+!p5@RUNX2!0.68!6.76!RUNX2;;chr1:247242107..247242120,-!p2@ZNF670!0.67!6.14!ZNF670;;chr1:167298425..167298440,+!p8@POU2F1!0.67!3.69!POU2F1;;chr21:36421518..36421532,-!p11@RUNX1!0.67!3.69!RUNX1;;chr11:19262421..19262455,-!p3@E2F8!0.67!3.69!E2F8;;chr11:44331576..44331650,-!p1@ALX4!0.67!3.69!ALX4;;chr13:100623375..100623425,-!p1@ZIC5!0.67!3.69!ZIC5;;chr13:72440901..72440968,-!p4@DACH1!0.67!3.69!DACH1;;chr16:54320322..54320343,-!p7@IRX3!0.67!3.69!IRX3;;chr2:1854631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!NOC3L;;chr6:122720837..122720857,+!p2@HSF2!0.21!1.23!HSF2;;chr7:74072175..74072188,+!p6@GTF2I!0.21!1.23!GTF2I;;chr8:135725369..135725388,-!p3@ZFAT!0.21!1.23!ZFAT;;chr7:148844205..148844236,+!p5@ZNF398!0.21!0.92!ZNF398;;chr8:71316403..71316427,-!p6@NCOA2!0.21!0.92!NCOA2;;chr13:41556186..41556208,-!p12@ELF1!0.21!0.92!ELF1;;chrX:131624020..131624048,-!p9@MBNL3!0.21!0.92!MBNL3;;chrX:131623026..131623039,-!p5@MBNL3!0.21!0.61!MBNL3;;chrX:57619083..57619113,+!p1@ZXDB!0.21!0.61!ZXDB;;chr9:130966497..130966541,-!p4@CIZ1!0.21!0.61!CIZ1;;chrX:131623874..131623878,-!p15@MBNL3!0.21!0.61!MBNL3;;chr15:57212001..57212015,+!p17@TCF12!0.21!0.61!TCF12;;chr15:90545434..90545449,+!p9@ZNF710!0.21!0.61!ZNF710;;chr17:48046642..48046667,+!p3@DLX4!0.21!0.61!DLX4;;chr17:79881409..79881423,-!p8@MAFG!0.21!0.61!MAFG;;chr18:55102959..55102985,+!p6@ONECUT2!0.21!0.61!ONECUT2;;chr18:56940611..56940660,-!p1@RAX!0.21!0.61!RAX;;chr1:157069495..157069541,-!p2@ETV3L!0.21!0.61!ETV3L;;chr1:158985553..158985574,+!p14@IFI16!0.21!0.61!IFI16;;chr1:221053444..221053473,+!p8@HLX!0.21!0.61!HLX;;chr1:25291620..25291635,-!p4@RUNX3!0.21!0.61!RUNX3;;chr1:3568961..3568973,+!p6@TP73!0.21!0.61!TP73;;chr1:40367668..40367684,-!p2@MYCL1!0.21!0.61!MYCL1;;chr1:47779845..47779848,-!p3@STIL,p8@TAL1!0.21!0.61!TAL1;;chr1:6479968..6479986,-!p1@HES2!0.21!0.61!HES2;;chr1:8585919..8585943,-!p18@RERE!0.21!0.61!RERE;;chr20:18038521..18038571,-!p1@OVOL2!0.21!0.61!OVOL2;;chr20:50418012..50418032,-!p7@SALL4!0.21!0.61!SALL4;;chr20:50418128..50418147,-!p2@SALL4!0.21!0.61!SALL4;;chr21:30671130..30671140,+!p10@BACH1!0.21!0.61!BACH1;;chr21:34398234..34398250,+!p1@OLIG2!0.21!0.61!OLIG2;;chr21:34442584..34442587,+!p3@OLIG1!0.21!0.61!OLIG1;;chr21:36421209..36421230,-!p24@RUNX1!0.21!0.61!RUNX1;;chr21:36421237..36421252,-!p33@RUNX1!0.21!0.61!RUNX1;;chr22:22874610..22874616,-!p1@ZNF280A!0.21!0.61!ZNF280A;;chr2:100721281..100721307,-!p5@AFF3!0.21!0.61!AFF3;;chr2:100721328..100721348,-!p4@AFF3!0.21!0.61!AFF3;;chr2:100758991..100759009,-!p3@AFF3!0.21!0.61!AFF3;;chr2:145147310..145147339,-!p20@ZEB2!0.21!0.61!ZEB2;;chr2:145147356..145147376,-!p24@ZEB2!0.21!0.61!ZEB2;;chr2:172950227..172950249,+!p2@DLX1!0.21!0.61!DLX1;;chr2:43454125..43454146,-!p2@ZFP36L2!0.21!0.61!ZFP36L2;;chr2:45169024..45169033,+!p12@SIX3!0.21!0.61!SIX3;;chr2:45236829..45236840,-!p3@SIX2!0.21!0.61!SIX2;;chr2:60780730..60780742,-!p5@BCL11A!0.21!0.61!BCL11A;;chr3:125093970..125093986,-!p5@ZNF148!0.21!0.61!ZNF148;;chr3:157824156..157824164,-!p4@SHOX2!0.21!0.61!SHOX2;;chr3:157824341..157824356,-!p8@SHOX2!0.21!0.61!SHOX2;;chr3:18466026..18466042,-!p30@SATB1!0.21!0.61!SATB1;;chr3:18486740..18486760,-!p10@SATB1!0.21!0.61!SATB1;;chr4:109089095..109089144,-!p6@LEF1!0.21!0.61!LEF1;;chr4:109089290..109089320,-!p14@LEF1!0.21!0.61!LEF1;;chr4:13546632..13546662,-!p1@NKX3-2!0.21!0.61!NKX3-2;;chr10:111967317..111967328,+!p5@MXI1!0.21!0.61!MXI1;;chr10:131762504..131762555,-!p1@EBF3!0.21!0.61!EBF3;;chr10:135044076..135044090,+!p8@UTF1!0.21!0.61!UTF1;;chr11:32456894..32456906,-!p8@WT1!0.21!0.61!WT1;;chr11:32457413..32457431,-!p2@WT1!0.21!0.61!WT1;;chr11:44331679..44331702,-!p2@ALX4!0.21!0.61!ALX4;;chr12:54694653..54694672,-!p2@NFE2!0.21!0.61!NFE2;;chr12:54694738..54694749,-!p5@NFE2!0.21!0.61!NFE2;;chr12:54778444..54778451,-!p8@ZNF385A!0.21!0.61!ZNF385A;;chr12:54779511..54779577,-!p5@ZNF385A!0.21!0.61!ZNF385A;;chr12:85673602..85673614,+!p6@ALX1!0.21!0.61!ALX1;;chr13:100634004..100634025,+!p2@ZIC2!0.21!0.61!ZIC2;;chr13:100634809..100634826,+!p11@ZIC2!0.21!0.61!ZIC2;;chr13:100638124..100638136,+!p7@ZIC2!0.21!0.61!ZIC2;;
|sample_ethnicity=J
+
|ffid_belonging_in_development=CL:0000049,CL:0000134
|sample_description=dev stage: 1 year old child<br>RIN: 10.00000<br>OD230/260: 1.99000<br>OD280/260: 2.06333<br>experiment condition: FREEZOME<br>Notes: machine failed, remainder reloaded, low amount
 
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
 
|rna_tube_id=106A3
 
|rna_box=106
 
|rna_position=A3
 
|rna_weight_ug=33.13493
 
|rna_sample_type=total RNA
 
|rna_concentration=1.50613
 
|profile_hcage=CNhs10722,LSID691,release008,COMPLETED
 
|profile_rnaseq=
 
|profile_srnaseq=
 
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002087,CL:0002194,CL:0002320,CL:0002371
 
|ancestors_in_disease_facet=DOID:0050686,DOID:0060083,DOID:1240,DOID:14566,DOID:162,DOID:2531,DOID:4,DOID:8692
 
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765
 
 
|fonse_cell_line=FF:0101035
 
|fonse_cell_line=FF:0101035
 
|fonse_cell_line_closure=FF:0101035
 
|fonse_cell_line_closure=FF:0101035
Line 54: Line 40:
 
|fonse_treatment=
 
|fonse_treatment=
 
|fonse_treatment_closure=
 
|fonse_treatment_closure=
 +
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aTHP-1%2520%2528fresh%2529.CNhs10722.10399-106A3.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aTHP-1%2520%2528fresh%2529.CNhs10722.10399-106A3.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aTHP-1%2520%2528fresh%2529.CNhs10722.10399-106A3.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aTHP-1%2520%2528fresh%2529.CNhs10722.10399-106A3.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aTHP-1%2520%2528fresh%2529.CNhs10722.10399-106A3.hg38.nobarcode.ctss.bed.gz
 +
|id=FF:10399-106A3
 +
|is_a=EFO:0002091;;FF:0000210;;FF:0101370;;FF:0101883
 +
|is_obsolete=
 +
|library_id=CNhs10722
 +
|library_id_phase_based=2:CNhs10722
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10399
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10399
 +
|name=acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh)
 +
|namespace=FANTOM5
 +
|part_of=
 +
|profile_cagescan=
 +
|profile_hcage=CNhs10722,LSID691,release008,COMPLETED
 +
|profile_rnaseq=
 +
|profile_srnaseq=
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
|repeat_enrich_byfamily=0,0,0,0,0,0.20803308059156,0,-0.0439624478761766,0,-0.277362132193514,-0.282403560576942,0,0,0,0,0,0,0,0,0,0.20803308059156,0,0,0,0.0547100702431322,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0.287892114826858,0,0,0,0,0,-0.118005373517684,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.575784229653716,0,-0.0423258072533601,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0.116355582210209,0,0.20803308059156,0,0,0.20803308059156,0,0,0,0,0.0581777911051045,0,0,0,0,0,-0.552571649267773,0,0,0,0.14412666552294,-0.107180862400089,0,0,0,0,-0.0980353512377064,-0.0802994096957905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00764294637331895,0,0,0,-0.175695884392047,-0.546074970118229,0,0,0,0,0,0
 +
|repeat_enrich_byname=0,0,0,0.20803308059156,-0.0980353512377064,0,0,0,0,0.116355582210209,0,0,0,0,0,0,-0.247178875285564,0,-0.266053138160449,-0.143515142523472,0,0.116355582210209,-0.427279086909571,0,0.116355582210209,0,0,0,0,0,0.116355582210209,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,-0.0186252810838506,0.0987119217080248,0,-0.116080270044405,-0.0683442610773682,0,0,0,0,0.267293749027957,0,-0.120879483793741,-0.0827201683234173,-0.221611588102807,-0.350521658225607,-0.055712496781182,0,0,0,-0.405633790370956,-0.0647032929754929,0,0,0.10514253273393,-0.06499403635045,0,0,-0.391044581551635,0,-0.553269213061424,-0.0465829943852163,0,0.194346513006353,0,0,0,0,0,0.116355582210209,0,0,0,0,0,-0.0574934668214365,0.0771955559274632,0,0,0,0,-0.410571774483048,0,-0.0138323107379372,-0.373286155956567,-0.061598895893301,-0.0299146649926606,0.228440242386374,0,-0.018699098809581,-0.182143700642767,-0.0964817744984125,0.14412666552294,-0.147401849371139,-0.189981719549847,0,-0.00162645564315289,-0.0374172737208457,0.0711950721140263,-0.0747496425371637,0,-0.883305637730801,-0.242058979022686,0,0,-0.0378767909832661,-0.266738753632714,0,0,0.324820663637363,-0.058897826556378,-0.421784919673355,-0.0134625920429565,-0.089767486910625,-0.323392611693441,-0.0395325284566706,-0.0035916839249871,-0.0238639173131013,-0.31755578460792,-0.0645308870598809,0,-0.00257146137627817,-0.0916958287873629,-0.115027422989192,0.133029182214487,0,0.157461785483533,0.139688819514192,0.0581777911051045,-0.00376812707209301,0.0263653371405483,0,-0.010600978425358,-0.462421648661203,0,0,0.172175454496096,0,0,0.0147244521043632,-0.0410871094254509,-0.116499979345335,0,-0.108379482793005,-0.00262293601598973,-0.239108289247482,0,-0.345539639793411,0.0620231831341656,0,-0.0089431763959037,0,-0.199528084002445,0.285733364634139,-0.200959890099451,-0.214361724800178,0.756488551302312,0.251923299806521,0.106554726363811,-0.0336566151244388,-0.118055180672097,0,0.0282287497349217,0,-0.88354475051838,-0.140682422157825,0,-0.583529904229572,0,-0.344046863111916,0,0.156295785170975,0.0509101894315,0.102429102915381,0.0353504781804761,1.01317832298675,0.229010735025485,0,-0.203150430797542,-0.788130937773974,0,0.198740767765186,-0.0553537812844944,0,-0.150367083334639,-0.41400533831225,0.231808862145412,-0.138989456679195,0,-0.441977287833353,0,0,0.257849911997175,-0.0274429571728289,0,0.13993174016701,-0.03341868455968,-0.0284318115415784,0.232131797121369,0,0,-0.191855569021117,0,0,0.118460109673411,-0.0636048451378017,-0.619783323958633,1.08082835144191,0,0.137239044941691,0,0,-0.0611721837549662,0.834902072687961,-0.0395799087176419,0,0,-0.000678779796466009,-0.116628112990133,0,0.10401654029578,0,0.0741421641740855,0,-0.044300563269521,0,0,0,0,0,-0.0110171274621957,0.0493508223899841,0,0.0984595697726187,0,0.116355582210209,0,0,0,-0.0261538835367787,0,0,-0.240016054721488,-0.336417379379927,-0.00666183346621081,0,0,0,0,-0.00769032196191485,-0.203236562094724,0,-0.0155071242874222,0,0,0,0,0.0302145924209981,0,0,0,0,0.0586251251565455,-0.26281392504863,0,0,0,-0.27695440160179,0,0,0,0,0.105921574325239,0,0,-0.150782175642338,0,0.0155368159139773,-0.0815818795468414,0,0.152186962584271,0.0497923465616439,-0.274923538833516,0,0,-0.261347131789888,0,0,0.266146821292342,0.0928425298692515,0.116355582210209,0,0,0,0,0,0,0,-0.214314512399756,0.13624713602154,0,0,0,0,0,0,0,0,0,0,-0.130377455546402,-0.0922240566585104,-0.0544990859160704,0,0,0,0,0,0,-0.0241060230789031,0.32435741040168,0,0,0,0,0,0.116355582210209,0,0,-0.06724178705681,0,0,0,0,0,-0.0969923612426051,0,0,0,0,-0.564807121153884,0,0,-0.277362132193514,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.00696350382523828,-0.61276956257784,0,0.116355582210209,0,0,0,0,0,-0.27483329820609,0,0,0,0,0.00247120850123227,0,0,0,0.299387767817276,0,-0.0439624478761766,0.20803308059156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0804874716163111,0,-0.0757240640547137,-0.0314192904625925,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0426486128108651,0,0,0,0,0,0,0,-0.0979578962680575,0,0,-0.0338550186954214,0,0,0,0,0,0,-0.0557476142734532,-0.225042608718042,-0.119938738499359,0,0,0,0.087459741617711,0.575784229653716,0,0,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0547100702431322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116355582210209,0,0,0.162194331400885,0,0,0,0,0,0,0.0241664278296882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575784229653716,0,-0.0800184682686384,0,0,0,-0.213086229657044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20803308059156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.405428866950395,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748855355393166,-0.434148460305503,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505,0,0,-0.118005373517684,0,0,0.0581777911051045,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,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 +
|rna_box=106
 +
|rna_catalog_number=
 +
|rna_concentration=1.506133333
 +
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
 +
|rna_lot_number=
 +
|rna_od260/230=1.99
 +
|rna_od260/280=2.063333333
 +
|rna_position=A3
 +
|rna_rin=10
 +
|rna_sample_type=total RNA
 +
|rna_tube_id=106A3
 +
|rna_weight_ug=33.13493333
 +
|sample_age=1
 +
|sample_category=cell lines
 +
|sample_cell_catalog=
 +
|sample_cell_line=THP-1
 +
|sample_cell_lot=
 +
|sample_cell_type=monoblast
 +
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
 +
|sample_company=
 +
|sample_description=dev stage: 1 year old child<br>RIN: 10.00000<br>OD230/260: 1.99000<br>OD280/260: 2.06333<br>experiment condition: FREEZOME<br>Notes: machine failed, remainder reloaded, low amount
 +
|sample_dev_stage=1 year old child
 +
|sample_disease=acute myeloid leukemia (FAB M5)
 +
|sample_donor(cell lot)=
 +
|sample_ethnicity=J
 +
|sample_experimental_condition=FREEZOME
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.67271113898658e-270!GO:0043227;membrane-bound organelle;2.66035167084493e-244!GO:0043231;intracellular membrane-bound organelle;4.69520012514205e-244!GO:0043226;organelle;1.53234358249845e-230!GO:0043229;intracellular organelle;5.82391193213002e-230!GO:0044422;organelle part;3.40507193650367e-162!GO:0044446;intracellular organelle part;1.78616341544735e-160!GO:0005737;cytoplasm;8.91349091067583e-160!GO:0044237;cellular metabolic process;1.98832043261062e-124!GO:0005634;nucleus;2.89436460185819e-122!GO:0044238;primary metabolic process;1.49265870428932e-120!GO:0044444;cytoplasmic part;1.24938914739859e-119!GO:0032991;macromolecular complex;2.28941732606514e-118!GO:0043170;macromolecule metabolic process;9.80726074314242e-114!GO:0030529;ribonucleoprotein complex;1.77643924625876e-102!GO:0044428;nuclear part;1.68650418681742e-99!GO:0043233;organelle lumen;8.15881016074908e-90!GO:0031974;membrane-enclosed lumen;8.15881016074908e-90!GO:0003723;RNA binding;1.98382670617421e-88!GO:0005739;mitochondrion;7.26187048030206e-74!GO:0043283;biopolymer metabolic process;1.16213246977468e-73!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.3632387303445e-70!GO:0010467;gene expression;3.26797563831712e-65!GO:0006396;RNA processing;3.58153004381779e-64!GO:0043234;protein complex;5.65766927792883e-59!GO:0006412;translation;3.8551128658365e-57!GO:0031981;nuclear lumen;4.08790869447905e-57!GO:0005515;protein binding;1.06241335514161e-56!GO:0005840;ribosome;1.18801448486273e-56!GO:0044429;mitochondrial part;1.33056983461252e-52!GO:0006259;DNA metabolic process;2.50533133675701e-51!GO:0016071;mRNA metabolic process;5.75752799855559e-50!GO:0003735;structural constituent of ribosome;6.28474479906995e-50!GO:0031967;organelle envelope;6.89030312517088e-48!GO:0031975;envelope;1.79902646381819e-47!GO:0019538;protein metabolic process;2.52378089797285e-47!GO:0003676;nucleic acid binding;2.73019677020562e-47!GO:0031090;organelle membrane;3.4284640466249e-46!GO:0033036;macromolecule localization;2.5387907446143e-45!GO:0044249;cellular biosynthetic process;3.38294082846329e-45!GO:0009058;biosynthetic process;3.41368088606255e-45!GO:0016043;cellular component organization and biogenesis;1.25134604599407e-44!GO:0008380;RNA splicing;1.2861942201995e-44!GO:0006397;mRNA processing;3.99210482065171e-44!GO:0015031;protein transport;1.0170936159127e-43!GO:0009059;macromolecule biosynthetic process;3.97348612334312e-43!GO:0044260;cellular macromolecule metabolic process;3.97348612334312e-43!GO:0044267;cellular protein metabolic process;5.43662403482002e-43!GO:0033279;ribosomal subunit;2.86712033063136e-42!GO:0045184;establishment of protein localization;1.00684983120481e-41!GO:0008104;protein localization;2.07818885949123e-40!GO:0006996;organelle organization and biogenesis;5.01573809582967e-38!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.21906394813192e-37!GO:0005829;cytosol;1.51215373849663e-37!GO:0065003;macromolecular complex assembly;8.95644012526259e-37!GO:0005654;nucleoplasm;4.78968257728663e-36!GO:0007049;cell cycle;6.50261302051685e-36!GO:0043228;non-membrane-bound organelle;7.25902543184169e-35!GO:0043232;intracellular non-membrane-bound organelle;7.25902543184169e-35!GO:0046907;intracellular transport;1.61873261448548e-34!GO:0016070;RNA metabolic process;7.55044287175966e-34!GO:0005681;spliceosome;1.71553527943719e-33!GO:0005740;mitochondrial envelope;1.87687020650508e-32!GO:0022607;cellular component assembly;3.21141190361014e-31!GO:0006974;response to DNA damage stimulus;9.40819367289012e-31!GO:0006886;intracellular protein transport;1.59774996408844e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.60722748565876e-30!GO:0031966;mitochondrial membrane;4.52372577812328e-30!GO:0019866;organelle inner membrane;7.24483023312786e-30!GO:0005694;chromosome;4.34038430251212e-29!GO:0000166;nucleotide binding;1.78576785505356e-28!GO:0022402;cell cycle process;1.85219134487915e-28!GO:0044451;nucleoplasm part;2.91479200198323e-28!GO:0006281;DNA repair;6.06186414474921e-28!GO:0005743;mitochondrial inner membrane;6.30798768316393e-28!GO:0000278;mitotic cell cycle;3.64231940484055e-27!GO:0051649;establishment of cellular localization;3.78039769894176e-27!GO:0051641;cellular localization;1.57959485628601e-26!GO:0044445;cytosolic part;8.68195128499879e-26!GO:0044427;chromosomal part;2.56318113947333e-25!GO:0006119;oxidative phosphorylation;9.76678421424212e-25!GO:0051276;chromosome organization and biogenesis;1.50700128302357e-24!GO:0022403;cell cycle phase;1.19956903912536e-23!GO:0031980;mitochondrial lumen;1.33179507311805e-23!GO:0005759;mitochondrial matrix;1.33179507311805e-23!GO:0000087;M phase of mitotic cell cycle;2.9635493980212e-22!GO:0044455;mitochondrial membrane part;3.67117667890108e-22!GO:0015935;small ribosomal subunit;4.6674857629914e-22!GO:0007067;mitosis;8.11079311239523e-22!GO:0044265;cellular macromolecule catabolic process;1.76745190158338e-21!GO:0022618;protein-RNA complex assembly;1.8539747564087e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.06103946946184e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;2.2192659367344e-21!GO:0015934;large ribosomal subunit;2.53231000783796e-21!GO:0016462;pyrophosphatase activity;3.72489087502659e-21!GO:0051301;cell division;3.83457465486377e-21!GO:0009719;response to endogenous stimulus;5.93690302351466e-21!GO:0016874;ligase activity;6.09071680664689e-21!GO:0006457;protein folding;6.92181897346633e-21!GO:0017111;nucleoside-triphosphatase activity;1.93942650037292e-20!GO:0005730;nucleolus;2.43811853233849e-20!GO:0006260;DNA replication;6.39412231892892e-20!GO:0000279;M phase;7.03904502272756e-20!GO:0043285;biopolymer catabolic process;3.14378927366751e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;7.20008980158086e-19!GO:0005746;mitochondrial respiratory chain;9.53067814812348e-19!GO:0032553;ribonucleotide binding;1.35723946799438e-18!GO:0032555;purine ribonucleotide binding;1.35723946799438e-18!GO:0017076;purine nucleotide binding;1.7787701557594e-18!GO:0044248;cellular catabolic process;1.9459697684215e-18!GO:0009057;macromolecule catabolic process;2.05288122577323e-18!GO:0051186;cofactor metabolic process;2.54842022698232e-18!GO:0006323;DNA packaging;3.43190596110254e-18!GO:0005524;ATP binding;5.37934771900834e-18!GO:0032559;adenyl ribonucleotide binding;1.02442993295295e-17!GO:0006512;ubiquitin cycle;1.57676312653966e-17!GO:0048770;pigment granule;1.92752878422344e-17!GO:0042470;melanosome;1.92752878422344e-17!GO:0030554;adenyl nucleotide binding;2.29310718361098e-17!GO:0012505;endomembrane system;2.96376762083642e-17!GO:0008135;translation factor activity, nucleic acid binding;4.81655065360264e-17!GO:0042254;ribosome biogenesis and assembly;5.98166998457313e-17!GO:0006605;protein targeting;6.12707977030075e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;6.53032259379619e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.68821525731877e-17!GO:0006511;ubiquitin-dependent protein catabolic process;9.3958970446286e-17!GO:0019941;modification-dependent protein catabolic process;9.68395616119285e-17!GO:0043632;modification-dependent macromolecule catabolic process;9.68395616119285e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.22284404758421e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.2952172352226e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.65376273767814e-16!GO:0003954;NADH dehydrogenase activity;1.65376273767814e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.65376273767814e-16!GO:0044257;cellular protein catabolic process;1.76764956215293e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;1.91796641522754e-16!GO:0000375;RNA splicing, via transesterification reactions;1.91796641522754e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.91796641522754e-16!GO:0005635;nuclear envelope;4.03603484450571e-16!GO:0005761;mitochondrial ribosome;4.26566920341832e-16!GO:0000313;organellar ribosome;4.26566920341832e-16!GO:0006732;coenzyme metabolic process;9.58446393963278e-16!GO:0016887;ATPase activity;1.0352966811355e-15!GO:0042623;ATPase activity, coupled;1.724671123848e-15!GO:0008134;transcription factor binding;2.00621998048082e-15!GO:0050657;nucleic acid transport;2.34071897279435e-15!GO:0051236;establishment of RNA localization;2.34071897279435e-15!GO:0050658;RNA transport;2.34071897279435e-15!GO:0006913;nucleocytoplasmic transport;2.9447709301844e-15!GO:0006403;RNA localization;4.11330082593728e-15!GO:0051169;nuclear transport;7.1387242624592e-15!GO:0016604;nuclear body;8.04920945453019e-15!GO:0042775;organelle ATP synthesis coupled electron transport;9.4903007002369e-15!GO:0042773;ATP synthesis coupled electron transport;9.4903007002369e-15!GO:0044453;nuclear membrane part;1.05222982238126e-14!GO:0031965;nuclear membrane;1.10274287618242e-14!GO:0051082;unfolded protein binding;1.15411166665851e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.53253230387752e-14!GO:0030964;NADH dehydrogenase complex (quinone);1.53253230387752e-14!GO:0045271;respiratory chain complex I;1.53253230387752e-14!GO:0005747;mitochondrial respiratory chain complex I;1.53253230387752e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.60494943003684e-14!GO:0043412;biopolymer modification;4.86142395589412e-14!GO:0051726;regulation of cell cycle;8.47770408442903e-14!GO:0030163;protein catabolic process;8.83994825614226e-14!GO:0006413;translational initiation;8.89263985363255e-14!GO:0005643;nuclear pore;9.0335193945735e-14!GO:0044432;endoplasmic reticulum part;1.08433503963358e-13!GO:0003743;translation initiation factor activity;1.20659514018007e-13!GO:0000074;regulation of progression through cell cycle;1.2471224041032e-13!GO:0006399;tRNA metabolic process;2.22730279930796e-13!GO:0051028;mRNA transport;2.91534285637923e-13!GO:0006333;chromatin assembly or disassembly;5.09078939335213e-13!GO:0004386;helicase activity;5.09078939335213e-13!GO:0000785;chromatin;6.78336339086783e-13!GO:0016568;chromatin modification;8.06498134342331e-13!GO:0065002;intracellular protein transport across a membrane;2.43105766149831e-12!GO:0065004;protein-DNA complex assembly;4.31239129198123e-12!GO:0006446;regulation of translational initiation;4.47135771644625e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.10604130020114e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.12056221375962e-12!GO:0016607;nuclear speck;6.74787094887671e-12!GO:0006364;rRNA processing;7.8320075205985e-12!GO:0005783;endoplasmic reticulum;8.74875911869666e-12!GO:0046930;pore complex;9.499328300284e-12!GO:0051188;cofactor biosynthetic process;1.0840346730427e-11!GO:0006464;protein modification process;1.1107541040262e-11!GO:0009259;ribonucleotide metabolic process;1.1282442208734e-11!GO:0016072;rRNA metabolic process;1.56550903017718e-11!GO:0008026;ATP-dependent helicase activity;2.83272092829411e-11!GO:0009056;catabolic process;3.26583907382183e-11!GO:0000775;chromosome, pericentric region;3.27257774649389e-11!GO:0006163;purine nucleotide metabolic process;3.30626412233051e-11!GO:0006366;transcription from RNA polymerase II promoter;3.88576969767271e-11!GO:0016192;vesicle-mediated transport;4.04586943255739e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.43510928222446e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.01839165043309e-10!GO:0012501;programmed cell death;1.21665468869534e-10!GO:0009055;electron carrier activity;1.22227910178053e-10!GO:0009260;ribonucleotide biosynthetic process;1.24623569762474e-10!GO:0048193;Golgi vesicle transport;1.31925258991809e-10!GO:0017038;protein import;1.33259765277387e-10!GO:0006915;apoptosis;1.34155629351548e-10!GO:0006164;purine nucleotide biosynthetic process;1.5023308348248e-10!GO:0016787;hydrolase activity;1.7072582502483e-10!GO:0005789;endoplasmic reticulum membrane;1.9310527092921e-10!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.94272554314481e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.20523061064634e-10!GO:0043566;structure-specific DNA binding;2.36801941027555e-10!GO:0009150;purine ribonucleotide metabolic process;2.93687713004897e-10!GO:0016779;nucleotidyltransferase activity;3.17954200237994e-10!GO:0043687;post-translational protein modification;3.24511893245054e-10!GO:0006261;DNA-dependent DNA replication;3.41024269077962e-10!GO:0003712;transcription cofactor activity;3.44088056664933e-10!GO:0009108;coenzyme biosynthetic process;4.30667279405229e-10!GO:0019222;regulation of metabolic process;5.44731602211836e-10!GO:0008639;small protein conjugating enzyme activity;5.92938700836228e-10!GO:0006334;nucleosome assembly;8.1362149432162e-10!GO:0008565;protein transporter activity;8.46313641524943e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.50375035403724e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.04173970407048e-09!GO:0004812;aminoacyl-tRNA ligase activity;1.04173970407048e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.04173970407048e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.33341914010049e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.33425783412761e-09!GO:0004842;ubiquitin-protein ligase activity;1.44023057352007e-09!GO:0008219;cell death;1.49220292686012e-09!GO:0016265;death;1.49220292686012e-09!GO:0009141;nucleoside triphosphate metabolic process;1.5192321927354e-09!GO:0050794;regulation of cellular process;1.64768879501983e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.86545909344599e-09!GO:0019787;small conjugating protein ligase activity;1.87357923354817e-09!GO:0043038;amino acid activation;1.9651684975327e-09!GO:0006418;tRNA aminoacylation for protein translation;1.9651684975327e-09!GO:0043039;tRNA aminoacylation;1.9651684975327e-09!GO:0009142;nucleoside triphosphate biosynthetic process;2.12479491327852e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.12479491327852e-09!GO:0015986;ATP synthesis coupled proton transport;2.67654169596849e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.67654169596849e-09!GO:0009060;aerobic respiration;2.78874288262491e-09!GO:0005819;spindle;2.97194273897375e-09!GO:0031497;chromatin assembly;2.97983253748259e-09!GO:0003697;single-stranded DNA binding;3.31373403878229e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.79927210006518e-09!GO:0009144;purine nucleoside triphosphate metabolic process;3.79927210006518e-09!GO:0006461;protein complex assembly;4.41169481040915e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.51863064991531e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.51863064991531e-09!GO:0019829;cation-transporting ATPase activity;1.07942551656966e-08!GO:0016881;acid-amino acid ligase activity;1.18120089411141e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.32980333256786e-08!GO:0015630;microtubule cytoskeleton;1.37135249650789e-08!GO:0045333;cellular respiration;2.21173619304053e-08!GO:0005657;replication fork;2.22322624235288e-08!GO:0051325;interphase;2.47154815506171e-08!GO:0046034;ATP metabolic process;2.56270959487604e-08!GO:0051329;interphase of mitotic cell cycle;2.62620171616507e-08!GO:0006754;ATP biosynthetic process;3.28240697447677e-08!GO:0006753;nucleoside phosphate metabolic process;3.28240697447677e-08!GO:0051170;nuclear import;4.95411342963833e-08!GO:0031323;regulation of cellular metabolic process;5.40986536698597e-08!GO:0007051;spindle organization and biogenesis;6.0397129188685e-08!GO:0015078;hydrogen ion transmembrane transporter activity;7.27582069076384e-08!GO:0005839;proteasome core complex (sensu Eukaryota);7.68109710356979e-08!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.07784669567752e-07!GO:0032446;protein modification by small protein conjugation;1.12629586082385e-07!GO:0006099;tricarboxylic acid cycle;1.26865471704216e-07!GO:0046356;acetyl-CoA catabolic process;1.26865471704216e-07!GO:0005813;centrosome;1.2794065193457e-07!GO:0000075;cell cycle checkpoint;1.38195885257333e-07!GO:0016567;protein ubiquitination;1.5794128331296e-07!GO:0005815;microtubule organizing center;1.67795205747002e-07!GO:0006606;protein import into nucleus;1.75091322332852e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.72245792196901e-07!GO:0005794;Golgi apparatus;2.92816723819308e-07!GO:0004298;threonine endopeptidase activity;3.29688705763713e-07!GO:0003713;transcription coactivator activity;3.33910898479311e-07!GO:0000245;spliceosome assembly;3.35244353678781e-07!GO:0006084;acetyl-CoA metabolic process;3.40607415486293e-07!GO:0006752;group transfer coenzyme metabolic process;3.40607415486293e-07!GO:0016740;transferase activity;3.5485323582415e-07!GO:0009117;nucleotide metabolic process;3.84042466113406e-07!GO:0051246;regulation of protein metabolic process;4.00993217403321e-07!GO:0045259;proton-transporting ATP synthase complex;4.49316246428624e-07!GO:0051168;nuclear export;5.43771413338443e-07!GO:0030120;vesicle coat;6.28252112451162e-07!GO:0030662;coated vesicle membrane;6.28252112451162e-07!GO:0008094;DNA-dependent ATPase activity;6.60615449183772e-07!GO:0006350;transcription;6.6067574182718e-07!GO:0006302;double-strand break repair;7.1804992001454e-07!GO:0007059;chromosome segregation;7.2179026202191e-07!GO:0009109;coenzyme catabolic process;7.3005007503974e-07!GO:0005773;vacuole;8.01211522905338e-07!GO:0000151;ubiquitin ligase complex;8.20984476512118e-07!GO:0043623;cellular protein complex assembly;1.06424420289329e-06!GO:0005793;ER-Golgi intermediate compartment;1.10112079405022e-06!GO:0006310;DNA recombination;1.17065235715319e-06!GO:0048475;coated membrane;1.31299790291282e-06!GO:0030117;membrane coat;1.31299790291282e-06!GO:0000323;lytic vacuole;1.36379092906555e-06!GO:0005764;lysosome;1.36379092906555e-06!GO:0005667;transcription factor complex;1.37216073966669e-06!GO:0016363;nuclear matrix;1.42992894029621e-06!GO:0007005;mitochondrion organization and biogenesis;1.46134110043034e-06!GO:0006793;phosphorus metabolic process;1.56876014706765e-06!GO:0006796;phosphate metabolic process;1.56876014706765e-06!GO:0003899;DNA-directed RNA polymerase activity;1.94542961471379e-06!GO:0051187;cofactor catabolic process;1.96829425196304e-06!GO:0042981;regulation of apoptosis;2.46624688086075e-06!GO:0005768;endosome;2.95986721443995e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.99792442393994e-06!GO:0043067;regulation of programmed cell death;3.64388646733081e-06!GO:0006613;cotranslational protein targeting to membrane;3.94751104681707e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.00770977199058e-06!GO:0006401;RNA catabolic process;4.35496388676568e-06!GO:0010468;regulation of gene expression;4.35496388676568e-06!GO:0050789;regulation of biological process;4.52439337539028e-06!GO:0016563;transcription activator activity;4.74261986364063e-06!GO:0003690;double-stranded DNA binding;4.94154342804837e-06!GO:0051427;hormone receptor binding;5.0058347368878e-06!GO:0003677;DNA binding;5.24264911790903e-06!GO:0005762;mitochondrial large ribosomal subunit;6.46207315955482e-06!GO:0000315;organellar large ribosomal subunit;6.46207315955482e-06!GO:0000776;kinetochore;7.1835664120287e-06!GO:0007088;regulation of mitosis;7.49486823231001e-06!GO:0031324;negative regulation of cellular metabolic process;8.22252518988997e-06!GO:0016853;isomerase activity;1.08094906969879e-05!GO:0035257;nuclear hormone receptor binding;1.08644181266992e-05!GO:0016491;oxidoreductase activity;1.14688269158857e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.16603769421812e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.41449701626238e-05!GO:0003724;RNA helicase activity;1.61808342431911e-05!GO:0016564;transcription repressor activity;1.94022467630554e-05!GO:0006612;protein targeting to membrane;2.02964189456991e-05!GO:0016741;transferase activity, transferring one-carbon groups;2.09051316028112e-05!GO:0004518;nuclease activity;2.19287584224348e-05!GO:0000786;nucleosome;2.41075439469189e-05!GO:0043021;ribonucleoprotein binding;3.07871215727991e-05!GO:0008168;methyltransferase activity;3.19904031875423e-05!GO:0008033;tRNA processing;3.28598049157881e-05!GO:0009165;nucleotide biosynthetic process;3.83150701257068e-05!GO:0044452;nucleolar part;3.9635935085097e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;4.24883225881467e-05!GO:0048523;negative regulation of cellular process;4.28596091633286e-05!GO:0003729;mRNA binding;5.20592675447323e-05!GO:0032774;RNA biosynthetic process;5.42713352340494e-05!GO:0045786;negative regulation of progression through cell cycle;5.54502521240732e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.80570484007123e-05!GO:0016310;phosphorylation;5.82782208215708e-05!GO:0007093;mitotic cell cycle checkpoint;5.87898877392073e-05!GO:0006950;response to stress;5.90239989887106e-05!GO:0004527;exonuclease activity;6.28703717407478e-05!GO:0003684;damaged DNA binding;7.04050380764129e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;7.66481816311758e-05!GO:0006351;transcription, DNA-dependent;7.79916906121822e-05!GO:0003678;DNA helicase activity;7.80320838207013e-05!GO:0000059;protein import into nucleus, docking;8.0619972619336e-05!GO:0003682;chromatin binding;8.80191670121862e-05!GO:0000314;organellar small ribosomal subunit;0.000100153761344892!GO:0005763;mitochondrial small ribosomal subunit;0.000100153761344892!GO:0006091;generation of precursor metabolites and energy;0.000109354785178414!GO:0006405;RNA export from nucleus;0.000111997510130774!GO:0005788;endoplasmic reticulum lumen;0.000113763629542322!GO:0030880;RNA polymerase complex;0.000123181309872309!GO:0005798;Golgi-associated vesicle;0.000127318181081904!GO:0032508;DNA duplex unwinding;0.000129656347308533!GO:0032392;DNA geometric change;0.000129656347308533!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000133361669853082!GO:0006414;translational elongation;0.000133822398829476!GO:0016859;cis-trans isomerase activity;0.000141044214064808!GO:0000228;nuclear chromosome;0.00014229958061069!GO:0008654;phospholipid biosynthetic process;0.00014551160597931!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000147740393063162!GO:0009892;negative regulation of metabolic process;0.000150066149883576!GO:0006383;transcription from RNA polymerase III promoter;0.000152874634679831!GO:0005885;Arp2/3 protein complex;0.000153853469202635!GO:0051052;regulation of DNA metabolic process;0.000162099284407893!GO:0015992;proton transport;0.000172418566263354!GO:0031988;membrane-bound vesicle;0.000173015083641316!GO:0006818;hydrogen transport;0.000179470867173583!GO:0043681;protein import into mitochondrion;0.000182385207446096!GO:0016481;negative regulation of transcription;0.000183099831756743!GO:0006268;DNA unwinding during replication;0.000228999533085811!GO:0007052;mitotic spindle organization and biogenesis;0.000256164603911849!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000259934594538278!GO:0015399;primary active transmembrane transporter activity;0.000259934594538278!GO:0046489;phosphoinositide biosynthetic process;0.000269824407703171!GO:0006402;mRNA catabolic process;0.000269890264953214!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000271474707258838!GO:0000428;DNA-directed RNA polymerase complex;0.000271474707258838!GO:0008186;RNA-dependent ATPase activity;0.000284913107910465!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000285200980310092!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000311601916091311!GO:0016023;cytoplasmic membrane-bound vesicle;0.00032444647369211!GO:0045454;cell redox homeostasis;0.000327428621734289!GO:0000082;G1/S transition of mitotic cell cycle;0.000334328940077479!GO:0043069;negative regulation of programmed cell death;0.000350691345704041!GO:0019752;carboxylic acid metabolic process;0.000352053891799734!GO:0043596;nuclear replication fork;0.000354366353341682!GO:0006082;organic acid metabolic process;0.000363762582649529!GO:0006626;protein targeting to mitochondrion;0.000377400783757299!GO:0065009;regulation of a molecular function;0.00039542426070162!GO:0030867;rough endoplasmic reticulum membrane;0.000396280280364347!GO:0051252;regulation of RNA metabolic process;0.000422980245339237!GO:0043066;negative regulation of apoptosis;0.000426424957233833!GO:0045449;regulation of transcription;0.000449507633713994!GO:0044440;endosomal part;0.000470614748738338!GO:0010008;endosome membrane;0.000470614748738338!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000476357757162339!GO:0048519;negative regulation of biological process;0.000477197172735082!GO:0015980;energy derivation by oxidation of organic compounds;0.00047803334086843!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000486517302085988!GO:0031982;vesicle;0.000499363573344221!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000527825203768946!GO:0005741;mitochondrial outer membrane;0.000561949461151029!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000574931661985617!GO:0031072;heat shock protein binding;0.000574931661985617!GO:0031968;organelle outer membrane;0.00058069167220121!GO:0031124;mRNA 3'-end processing;0.000631886808050061!GO:0016251;general RNA polymerase II transcription factor activity;0.000671274415107021!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000690469261936563!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000690469261936563!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000690469261936563!GO:0030384;phosphoinositide metabolic process;0.000715862433598223!GO:0046474;glycerophospholipid biosynthetic process;0.000783534972041333!GO:0004004;ATP-dependent RNA helicase activity;0.000820072789576278!GO:0019867;outer membrane;0.000820072789576278!GO:0005770;late endosome;0.000862589489825457!GO:0006916;anti-apoptosis;0.000868191961882463!GO:0048500;signal recognition particle;0.000888759644617738!GO:0045045;secretory pathway;0.000926537371677806!GO:0006611;protein export from nucleus;0.0010105943971027!GO:0000922;spindle pole;0.0010468750947069!GO:0005769;early endosome;0.00109472263647693!GO:0007006;mitochondrial membrane organization and biogenesis;0.00114503990223393!GO:0003702;RNA polymerase II transcription factor activity;0.00114899848570021!GO:0030658;transport vesicle membrane;0.00117387031323073!GO:0005684;U2-dependent spliceosome;0.0012280329520193!GO:0031410;cytoplasmic vesicle;0.00123766386872458!GO:0006352;transcription initiation;0.00124811471271052!GO:0006270;DNA replication initiation;0.00124811471271052!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00127706864401863!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00127706864401863!GO:0032940;secretion by cell;0.00131792540774181!GO:0008312;7S RNA binding;0.00132837835527237!GO:0051920;peroxiredoxin activity;0.00133114087253304!GO:0043601;nuclear replisome;0.00134792899363562!GO:0030894;replisome;0.00134792899363562!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00135305894530854!GO:0000819;sister chromatid segregation;0.00137071377532722!GO:0006839;mitochondrial transport;0.0014354307488655!GO:0005876;spindle microtubule;0.00155704047814234!GO:0019899;enzyme binding;0.00157291513064507!GO:0042393;histone binding;0.00157291513064507!GO:0046483;heterocycle metabolic process;0.00160948720878484!GO:0003924;GTPase activity;0.00161173905875025!GO:0033367;protein localization in mast cell secretory granule;0.00161173905875025!GO:0033365;protein localization in organelle;0.00161173905875025!GO:0033371;T cell secretory granule organization and biogenesis;0.00161173905875025!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00161173905875025!GO:0033375;protease localization in T cell secretory granule;0.00161173905875025!GO:0042629;mast cell granule;0.00161173905875025!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00161173905875025!GO:0033364;mast cell secretory granule organization and biogenesis;0.00161173905875025!GO:0033380;granzyme B localization in T cell secretory granule;0.00161173905875025!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00161173905875025!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00161173905875025!GO:0033368;protease localization in mast cell secretory granule;0.00161173905875025!GO:0033366;protein localization in secretory granule;0.00161173905875025!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00161173905875025!GO:0033374;protein localization in T cell secretory granule;0.00161173905875025!GO:0005048;signal sequence binding;0.00173963818209554!GO:0030663;COPI coated vesicle membrane;0.00174013969720921!GO:0030126;COPI vesicle coat;0.00174013969720921!GO:0009112;nucleobase metabolic process;0.00177557489880662!GO:0043492;ATPase activity, coupled to movement of substances;0.00179724256693423!GO:0000725;recombinational repair;0.00181710032441397!GO:0000724;double-strand break repair via homologous recombination;0.00181710032441397!GO:0000070;mitotic sister chromatid segregation;0.00183324312438069!GO:0005525;GTP binding;0.00190574048118001!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00195802055802331!GO:0045047;protein targeting to ER;0.00195802055802331!GO:0044431;Golgi apparatus part;0.00202019060776338!GO:0006284;base-excision repair;0.00203639973414573!GO:0019843;rRNA binding;0.00205133180639258!GO:0000910;cytokinesis;0.002125616520216!GO:0031252;leading edge;0.00219428155477183!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00221726037766004!GO:0003714;transcription corepressor activity;0.00223884792672679!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00230409470125369!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00231593488690532!GO:0030660;Golgi-associated vesicle membrane;0.00236195220030482!GO:0000792;heterochromatin;0.0024318240395424!GO:0005758;mitochondrial intermembrane space;0.00246336888044176!GO:0003711;transcription elongation regulator activity;0.00255026077023414!GO:0000152;nuclear ubiquitin ligase complex;0.00259064858813591!GO:0031123;RNA 3'-end processing;0.00270546284226642!GO:0000049;tRNA binding;0.00273484263421586!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00276461783098668!GO:0006506;GPI anchor biosynthetic process;0.00284115830255191!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00286381970118902!GO:0006417;regulation of translation;0.00288620356983677!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00291441645282896!GO:0006650;glycerophospholipid metabolic process;0.00309079894642461!GO:0044454;nuclear chromosome part;0.00311873998853187!GO:0051087;chaperone binding;0.00311873998853187!GO:0022890;inorganic cation transmembrane transporter activity;0.00314497529501036!GO:0005774;vacuolar membrane;0.00323129574874084!GO:0000178;exosome (RNase complex);0.00328311356071758!GO:0031570;DNA integrity checkpoint;0.00333909099688561!GO:0050662;coenzyme binding;0.00336880290951929!GO:0043284;biopolymer biosynthetic process;0.00339708069732394!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00367611714774611!GO:0008408;3'-5' exonuclease activity;0.00371734840216384!GO:0006355;regulation of transcription, DNA-dependent;0.00378844424257951!GO:0006595;polyamine metabolic process;0.003793192965802!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00389826187541899!GO:0032200;telomere organization and biogenesis;0.00412368647734602!GO:0000723;telomere maintenance;0.00412368647734602!GO:0006505;GPI anchor metabolic process;0.00421243185640836!GO:0006338;chromatin remodeling;0.0042533132809368!GO:0006733;oxidoreduction coenzyme metabolic process;0.00433732688574261!GO:0065007;biological regulation;0.00434664625352609!GO:0009451;RNA modification;0.0043528485525378!GO:0046467;membrane lipid biosynthetic process;0.00445472703583168!GO:0008276;protein methyltransferase activity;0.00445472703583168!GO:0051539;4 iron, 4 sulfur cluster binding;0.004580806272232!GO:0006767;water-soluble vitamin metabolic process;0.00467169083679832!GO:0035258;steroid hormone receptor binding;0.00483983497272947!GO:0006891;intra-Golgi vesicle-mediated transport;0.00483983497272947!GO:0000726;non-recombinational repair;0.00483983497272947!GO:0008632;apoptotic program;0.00483983497272947!GO:0006497;protein amino acid lipidation;0.00484383641222549!GO:0000339;RNA cap binding;0.00494417018234776!GO:0008610;lipid biosynthetic process;0.00499289490047441!GO:0000096;sulfur amino acid metabolic process;0.00504214091760588!GO:0006520;amino acid metabolic process;0.00510232236927202!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00515367683053367!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00521784324991766!GO:0016272;prefoldin complex;0.00525610633214036!GO:0030118;clathrin coat;0.00526264455158299!GO:0031326;regulation of cellular biosynthetic process;0.00529157592269881!GO:0044262;cellular carbohydrate metabolic process;0.00549540558585811!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00551966621855174!GO:0043488;regulation of mRNA stability;0.00555809501052274!GO:0043487;regulation of RNA stability;0.00555809501052274!GO:0008047;enzyme activator activity;0.00558168508605908!GO:0030521;androgen receptor signaling pathway;0.00560396140176366!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00562051492920112!GO:0030176;integral to endoplasmic reticulum membrane;0.00566894388528723!GO:0006378;mRNA polyadenylation;0.00608518948345129!GO:0043414;biopolymer methylation;0.00608551070825125!GO:0006406;mRNA export from nucleus;0.00611691786556527!GO:0031970;organelle envelope lumen;0.00612516461323612!GO:0006144;purine base metabolic process;0.00614058672418914!GO:0006289;nucleotide-excision repair;0.00619281457461363!GO:0003887;DNA-directed DNA polymerase activity;0.0063520056785!GO:0032259;methylation;0.00644203520930704!GO:0046966;thyroid hormone receptor binding;0.0064610290874212!GO:0042802;identical protein binding;0.00646633515513542!GO:0007017;microtubule-based process;0.00654840036024788!GO:0005669;transcription factor TFIID complex;0.00656900751133487!GO:0007021;tubulin folding;0.00663311107569336!GO:0000139;Golgi membrane;0.00669771521355395!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00677083776422775!GO:0030137;COPI-coated vesicle;0.00678202077705972!GO:0005637;nuclear inner membrane;0.00679598981361933!GO:0006376;mRNA splice site selection;0.0068017431947332!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0068017431947332!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00700949134116086!GO:0005765;lysosomal membrane;0.00706195242754683!GO:0051540;metal cluster binding;0.00710169256268129!GO:0051536;iron-sulfur cluster binding;0.00710169256268129!GO:0047485;protein N-terminus binding;0.00729619061392716!GO:0051053;negative regulation of DNA metabolic process;0.00729619061392716!GO:0044437;vacuolar part;0.00742675616638892!GO:0005791;rough endoplasmic reticulum;0.0074370901365744!GO:0008139;nuclear localization sequence binding;0.00762399388786426!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00762399388786426!GO:0046983;protein dimerization activity;0.00762399388786426!GO:0033116;ER-Golgi intermediate compartment membrane;0.00762399388786426!GO:0032603;fractalkine production;0.00762399388786426!GO:0050725;positive regulation of interleukin-1 beta biosynthetic process;0.00762399388786426!GO:0050752;regulation of fractalkine biosynthetic process;0.00762399388786426!GO:0045362;positive regulation of interleukin-1 biosynthetic process;0.00762399388786426!GO:0050754;positive regulation of fractalkine biosynthetic process;0.00762399388786426!GO:0001774;microglial cell activation;0.00762399388786426!GO:0050756;fractalkine metabolic process;0.00762399388786426!GO:0005766;primary lysosome;0.00762399388786426!GO:0050751;fractalkine biosynthetic process;0.00762399388786426!GO:0042222;interleukin-1 biosynthetic process;0.00762399388786426!GO:0050722;regulation of interleukin-1 beta biosynthetic process;0.00762399388786426!GO:0045360;regulation of interleukin-1 biosynthetic process;0.00762399388786426!GO:0042582;azurophil granule;0.00762399388786426!GO:0050720;interleukin-1 beta biosynthetic process;0.00762399388786426!GO:0051789;response to protein stimulus;0.00766360346198269!GO:0006986;response to unfolded protein;0.00766360346198269!GO:0005874;microtubule;0.00771585872670601!GO:0043065;positive regulation of apoptosis;0.00787627734225264!GO:0051287;NAD binding;0.00787627734225264!GO:0032984;macromolecular complex disassembly;0.00792380855889873!GO:0042158;lipoprotein biosynthetic process;0.00797468831107684!GO:0004532;exoribonuclease activity;0.00807055647461352!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00807055647461352!GO:0016584;nucleosome positioning;0.00826656400025198!GO:0031577;spindle checkpoint;0.00828724507560008!GO:0005832;chaperonin-containing T-complex;0.00831704601842744!GO:0009124;nucleoside monophosphate biosynthetic process;0.00831737251243469!GO:0009123;nucleoside monophosphate metabolic process;0.00831737251243469!GO:0004540;ribonuclease activity;0.00837129923461307!GO:0050790;regulation of catalytic activity;0.00837129923461307!GO:0043022;ribosome binding;0.00842343439996262!GO:0003746;translation elongation factor activity;0.0086830422493967!GO:0009116;nucleoside metabolic process;0.00877361866084967!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00880301366386296!GO:0015002;heme-copper terminal oxidase activity;0.00880301366386296!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00880301366386296!GO:0004129;cytochrome-c oxidase activity;0.00880301366386296!GO:0015631;tubulin binding;0.00931069705204891!GO:0004003;ATP-dependent DNA helicase activity;0.00935519465560991!GO:0000118;histone deacetylase complex;0.00942606993938291!GO:0004177;aminopeptidase activity;0.00952706369475797!GO:0048522;positive regulation of cellular process;0.00959109080290437!GO:0016197;endosome transport;0.00966006739036908!GO:0004674;protein serine/threonine kinase activity;0.00976359511035208!GO:0007034;vacuolar transport;0.00992294862867122!GO:0043068;positive regulation of programmed cell death;0.0101268689932166!GO:0016791;phosphoric monoester hydrolase activity;0.0101579218944954!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0103969846793926!GO:0016018;cyclosporin A binding;0.0104438474855028!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0104649854680246!GO:0007040;lysosome organization and biogenesis;0.0110497285006083!GO:0016788;hydrolase activity, acting on ester bonds;0.0111160498355497!GO:0030518;steroid hormone receptor signaling pathway;0.0113379227022319!GO:0016279;protein-lysine N-methyltransferase activity;0.0113379227022319!GO:0018024;histone-lysine N-methyltransferase activity;0.0113379227022319!GO:0016278;lysine N-methyltransferase activity;0.0113379227022319!GO:0032039;integrator complex;0.0113667285320612!GO:0022411;cellular component disassembly;0.0115097057819615!GO:0006275;regulation of DNA replication;0.0115681074795402!GO:0042770;DNA damage response, signal transduction;0.0117112536692806!GO:0000077;DNA damage checkpoint;0.0119554783895757!GO:0000790;nuclear chromatin;0.0119993385719653!GO:0004576;oligosaccharyl transferase activity;0.0122953375038427!GO:0046112;nucleobase biosynthetic process;0.0122953375038427!GO:0048471;perinuclear region of cytoplasm;0.0124310942500115!GO:0005905;coated pit;0.0126643887851721!GO:0008097;5S rRNA binding;0.0127596008817728!GO:0006007;glucose catabolic process;0.0131074455590711!GO:0000781;chromosome, telomeric region;0.0131688079945259!GO:0030119;AP-type membrane coat adaptor complex;0.0131837792826375!GO:0009889;regulation of biosynthetic process;0.0137735921053685!GO:0043241;protein complex disassembly;0.0137735921053685!GO:0016311;dephosphorylation;0.014296755502952!GO:0042054;histone methyltransferase activity;0.0143435827746077!GO:0008250;oligosaccharyl transferase complex;0.0144232842132519!GO:0032561;guanyl ribonucleotide binding;0.0147449042952335!GO:0019001;guanyl nucleotide binding;0.0147449042952335!GO:0030041;actin filament polymerization;0.0148800331965677!GO:0007050;cell cycle arrest;0.015223274275849!GO:0006220;pyrimidine nucleotide metabolic process;0.0157032654080873!GO:0030125;clathrin vesicle coat;0.015775814857181!GO:0030665;clathrin coated vesicle membrane;0.015775814857181!GO:0008144;drug binding;0.015775814857181!GO:0005869;dynactin complex;0.016306678299568!GO:0006730;one-carbon compound metabolic process;0.016306678299568!GO:0005658;alpha DNA polymerase:primase complex;0.016475979701849!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0168875469252836!GO:0008234;cysteine-type peptidase activity;0.0170934438938661!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0173799455647279!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0183817133409351!GO:0006509;membrane protein ectodomain proteolysis;0.018443644659433!GO:0033619;membrane protein proteolysis;0.018443644659433!GO:0030132;clathrin coat of coated pit;0.01845050322599!GO:0009161;ribonucleoside monophosphate metabolic process;0.0185672793657148!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0185672793657148!GO:0002084;protein depalmitoylation;0.0185759755923758!GO:0006607;NLS-bearing substrate import into nucleus;0.0189390376841799!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0196371941213783!GO:0006672;ceramide metabolic process;0.0198543107254845!GO:0030131;clathrin adaptor complex;0.0198647731147158!GO:0006596;polyamine biosynthetic process;0.0199997996335624!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0211051593107536!GO:0051098;regulation of binding;0.0211665208517176!GO:0000287;magnesium ion binding;0.0216292681111982!GO:0051320;S phase;0.0216384289147432!GO:0005663;DNA replication factor C complex;0.0216384289147432!GO:0000086;G2/M transition of mitotic cell cycle;0.0216450939358093!GO:0008180;signalosome;0.0217329568371362!GO:0008538;proteasome activator activity;0.0220312805023298!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.022047048678824!GO:0030508;thiol-disulfide exchange intermediate activity;0.0220776914321697!GO:0003923;GPI-anchor transamidase activity;0.0220873040108408!GO:0016255;attachment of GPI anchor to protein;0.0220873040108408!GO:0042765;GPI-anchor transamidase complex;0.0220873040108408!GO:0000209;protein polyubiquitination;0.0226025016834198!GO:0006769;nicotinamide metabolic process;0.0227162449119085!GO:0044450;microtubule organizing center part;0.0228288650520721!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0232871544894353!GO:0008536;Ran GTPase binding;0.023397023442633!GO:0031371;ubiquitin conjugating enzyme complex;0.0236311103460488!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0236311103460488!GO:0030433;ER-associated protein catabolic process;0.0236747911086951!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0236747911086951!GO:0005680;anaphase-promoting complex;0.0240641565323405!GO:0004520;endodeoxyribonuclease activity;0.0241210525906285!GO:0019206;nucleoside kinase activity;0.0242581280638879!GO:0018196;peptidyl-asparagine modification;0.0242581280638879!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0242581280638879!GO:0007033;vacuole organization and biogenesis;0.0246326691756127!GO:0043189;H4/H2A histone acetyltransferase complex;0.0252147395657178!GO:0004523;ribonuclease H activity;0.0253069940359191!GO:0007010;cytoskeleton organization and biogenesis;0.0254474890956234!GO:0035267;NuA4 histone acetyltransferase complex;0.0255727397546403!GO:0043524;negative regulation of neuron apoptosis;0.0258398946834807!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0258818448531433!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0262196825073122!GO:0045892;negative regulation of transcription, DNA-dependent;0.0262421211305734!GO:0030134;ER to Golgi transport vesicle;0.0262528568803306!GO:0046822;regulation of nucleocytoplasmic transport;0.0263518063382876!GO:0030133;transport vesicle;0.0263518063382876!GO:0046365;monosaccharide catabolic process;0.0264946239657011!GO:0016569;covalent chromatin modification;0.027129130013426!GO:0006301;postreplication repair;0.0272382171186905!GO:0043624;cellular protein complex disassembly;0.0276042985084551!GO:0048487;beta-tubulin binding;0.0276169031893228!GO:0000793;condensed chromosome;0.0281033716298677!GO:0005784;translocon complex;0.0281749794002854!GO:0004261;cathepsin G activity;0.0283907052549725!GO:0050681;androgen receptor binding;0.0283907052549725!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0286575617957104!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0287418191176261!GO:0010257;NADH dehydrogenase complex assembly;0.0287418191176261!GO:0033108;mitochondrial respiratory chain complex assembly;0.0287418191176261!GO:0043631;RNA polyadenylation;0.0288469929717512!GO:0007243;protein kinase cascade;0.029296696676765!GO:0006379;mRNA cleavage;0.0303383874021537!GO:0031647;regulation of protein stability;0.0304173981392998!GO:0005777;peroxisome;0.0306827651245562!GO:0042579;microbody;0.0306827651245562!GO:0006303;double-strand break repair via nonhomologous end joining;0.0310620537116606!GO:0008156;negative regulation of DNA replication;0.0310745154398678!GO:0009303;rRNA transcription;0.031162042431242!GO:0016180;snRNA processing;0.0315214525180157!GO:0016073;snRNA metabolic process;0.0315214525180157!GO:0030127;COPII vesicle coat;0.0317620646681762!GO:0012507;ER to Golgi transport vesicle membrane;0.0317620646681762!GO:0006266;DNA ligation;0.033109296392753!GO:0008637;apoptotic mitochondrial changes;0.0333970868759622!GO:0000175;3'-5'-exoribonuclease activity;0.0340116893264827!GO:0003756;protein disulfide isomerase activity;0.0342728895972884!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0342728895972884!GO:0006740;NADPH regeneration;0.0342728895972884!GO:0006098;pentose-phosphate shunt;0.0342728895972884!GO:0007004;telomere maintenance via telomerase;0.0343973092687813!GO:0001726;ruffle;0.0346932698741869!GO:0000097;sulfur amino acid biosynthetic process;0.0351487906195923!GO:0006400;tRNA modification;0.0351487906195923!GO:0006917;induction of apoptosis;0.0351973558932448!GO:0005996;monosaccharide metabolic process;0.0352622413951302!GO:0007041;lysosomal transport;0.0354456046596707!GO:0046982;protein heterodimerization activity;0.0358216948205337!GO:0008022;protein C-terminus binding;0.0360986190142729!GO:0015036;disulfide oxidoreductase activity;0.0366440444856784!GO:0004721;phosphoprotein phosphatase activity;0.0368813771404977!GO:0030911;TPR domain binding;0.0375291207511996!GO:0046128;purine ribonucleoside metabolic process;0.038428951485803!GO:0042278;purine nucleoside metabolic process;0.038428951485803!GO:0019318;hexose metabolic process;0.0384306799309952!GO:0006643;membrane lipid metabolic process;0.0384481439952167!GO:0019320;hexose catabolic process;0.0384739951601108!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0387241104817576!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0387888852639299!GO:0045039;protein import into mitochondrial inner membrane;0.0387888852639299!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0388164557485813!GO:0004536;deoxyribonuclease activity;0.0392146240864133!GO:0040029;regulation of gene expression, epigenetic;0.0392146240864133!GO:0042026;protein refolding;0.0396048581642094!GO:0000123;histone acetyltransferase complex;0.0397212394948872!GO:0017166;vinculin binding;0.0399651276885494!GO:0046164;alcohol catabolic process;0.0401000715043629!GO:0019362;pyridine nucleotide metabolic process;0.0402064438143506!GO:0016860;intramolecular oxidoreductase activity;0.0406335831743845!GO:0006118;electron transport;0.0410833083912821!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0413031915080054!GO:0012510;trans-Golgi network transport vesicle membrane;0.0413031915080054!GO:0006779;porphyrin biosynthetic process;0.0419090306215404!GO:0033014;tetrapyrrole biosynthetic process;0.0419090306215404!GO:0048037;cofactor binding;0.0422563417273287!GO:0046519;sphingoid metabolic process;0.042583590781855!GO:0016044;membrane organization and biogenesis;0.0426414180741653!GO:0007096;regulation of exit from mitosis;0.0431567989833028!GO:0010458;exit from mitosis;0.0431567989833028!GO:0012502;induction of programmed cell death;0.0431935801629612!GO:0006516;glycoprotein catabolic process;0.0433401302972231!GO:0016126;sterol biosynthetic process;0.0436523255792791!GO:0044438;microbody part;0.0451248711706383!GO:0044439;peroxisomal part;0.0451248711706383!GO:0004448;isocitrate dehydrogenase activity;0.0461823920614218!GO:0006778;porphyrin metabolic process;0.0463894640762117!GO:0033013;tetrapyrrole metabolic process;0.0463894640762117!GO:0022415;viral reproductive process;0.0478106640127925!GO:0006458;'de novo' protein folding;0.0480219595045538!GO:0051084;'de novo' posttranslational protein folding;0.0480219595045538!GO:0045947;negative regulation of translational initiation;0.0480219595045538!GO:0022406;membrane docking;0.0487550351898604!GO:0048278;vesicle docking;0.0487550351898604!GO:0031902;late endosome membrane;0.0491009396845297!GO:0031625;ubiquitin protein ligase binding;0.0491465062219078!GO:0006278;RNA-dependent DNA replication;0.0492926010389974!GO:0008537;proteasome activator complex;0.0495720609166639
 +
|sample_id=10399
 +
|sample_note=machine failed, remainder reloaded, low amount
 +
|sample_sex=male
 +
|sample_species=Human (Homo sapiens)
 +
|sample_strain=
 +
|sample_tissue=blood
 +
|top_motifs=MYB:2.38571439444;E2F1..5:1.86080844836;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.5648312351;NANOG:1.55821936592;YY1:1.53788240333;NFY{A,B,C}:1.09572575345;AIRE:1.04809112678;ELK1,4_GABP{A,B1}:0.995700785318;NRF1:0.973245020574;DMAP1_NCOR{1,2}_SMARC:0.928274899438;SPIB:0.877107536976;ELF1,2,4:0.859527105053;CUX2:0.828700651606;SPI1:0.791942261133;NR6A1:0.791543169858;NANOG{mouse}:0.764451563975;BREu{core}:0.734494765475;RFX2..5_RFXANK_RFXAP:0.714967003571;ARID5B:0.632415235825;NR5A1,2:0.626788966922;NFIL3:0.610075985397;POU5F1:0.580431810154;HOX{A6,A7,B6,B7}:0.55595338007;CRX:0.545761708337;ZNF143:0.543717900832;FOXP3:0.536690082239;ALX1:0.530183165123;TEF:0.529646837692;NKX2-2,8:0.492736599017;FOXA2:0.472844495134;ETS1,2:0.464402147477;STAT1,3:0.462274976216;GCM1,2:0.458979424661;PAX5:0.439882115539;PRRX1,2:0.435399119634;TOPORS:0.421526694651;HOX{A5,B5}:0.389870967921;CEBPA,B_DDIT3:0.369116754359;PITX1..3:0.361927113071;POU2F1..3:0.354928854252;PPARG:0.34944568227;NKX3-2:0.333902555846;PAX8:0.306466231127;MYOD1:0.25809147642;GATA6:0.245219885365;CDX1,2,4:0.232688304005;NKX2-1,4:0.230442369096;OCT4_SOX2{dimer}:0.227787006518;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.195795006568;HOX{A4,D4}:0.191359355161;RXRA_VDR{dimer}:0.185215630818;TFDP1:0.180915702512;GFI1:0.169815119707;HNF4A_NR2F1,2:0.163696392721;PBX1:0.115248167057;EN1,2:0.114084689047;KLF4:0.109712799056;POU1F1:0.100682181321;DBP:0.0914711520296;SRF:0.0903270133543;HAND1,2:0.0751527868093;PRDM1:0.0744141171184;RUNX1..3:0.0704077892641;HLF:0.0647614956572;PAX3,7:0.0639081747142;FOXN1:0.0532195222498;CREB1:0.0164598621757;GATA4:0.00887728104028;NFE2L1:0.00118122898093;FOXD3:-0.0267850403779;HBP1_HMGB_SSRP1_UBTF:-0.0345397277577;HNF1A:-0.0436829323307;HES1:-0.0458525800612;ESR1:-0.0515949015521;bHLH_family:-0.0657431191523;RORA:-0.0658134370502;SOX{8,9,10}:-0.0708041899175;SREBF1,2:-0.0816588627571;NKX2-3_NKX2-5:-0.0860774232462;FOXP1:-0.10176023875;AR:-0.11410883221;IRF1,2:-0.124992840446;POU3F1..4:-0.127397663966;NKX3-1:-0.187541550108;NR1H4:-0.197783682064;TAL1_TCF{3,4,12}:-0.198985216951;IRF7:-0.224014180213;EP300:-0.231002381173;SOX17:-0.237722364014;MEF2{A,B,C,D}:-0.238847490811;MTF1:-0.240545411356;ZNF238:-0.250484327357;ZEB1:-0.258056280383;NFE2L2:-0.288689856554;MYBL2:-0.302145309465;LEF1_TCF7_TCF7L1,2:-0.327675601903;VSX1,2:-0.336682452292;IKZF2:-0.34048314813;TGIF1:-0.353134170141;ATF5_CREB3:-0.361720365069;FOXQ1:-0.366984162309;PAX2:-0.367809609764;HSF1,2:-0.371010420366;POU6F1:-0.371863045129;FOX{F1,F2,J1}:-0.382510199737;REST:-0.385685183681;SOX5:-0.389249608004;STAT5{A,B}:-0.390657097195;NFKB1_REL_RELA:-0.395965060397;ATF4:-0.409824992887;FOSL2:-0.419332100583;ZBTB16:-0.420122548872;ATF2:-0.420135336728;HIF1A:-0.431774994075;LMO2:-0.432053807533;ZNF423:-0.443327612715;AHR_ARNT_ARNT2:-0.447340920782;ESRRA:-0.453654568381;FOS_FOS{B,L1}_JUN{B,D}:-0.485917009431;TLX2:-0.501458372765;RFX1:-0.506856321973;ZFP161:-0.509308265492;NHLH1,2:-0.512982859611;NFE2:-0.519260492884;PDX1:-0.521708354282;EVI1:-0.536355085409;TFAP2{A,C}:-0.543555837237;ONECUT1,2:-0.551368667521;BACH2:-0.555527440254;HOXA9_MEIS1:-0.561577980598;SPZ1:-0.564288812318;T:-0.56480351638;LHX3,4:-0.575435906465;NKX6-1,2:-0.578903488918;MZF1:-0.596657781787;RBPJ:-0.608229964557;SNAI1..3:-0.630101954886;TBP:-0.634383843583;TBX4,5:-0.635783488861;ATF6:-0.636850678728;PAX6:-0.663878797442;XBP1:-0.672183754369;UFEwm:-0.675535618606;MYFfamily:-0.68455027183;TP53:-0.690925055885;MED-1{core}:-0.743168502117;MTE{core}:-0.753300121195;TFAP4:-0.762498284284;HMGA1,2:-0.769052058915;IKZF1:-0.785982125814;ZNF148:-0.788728151482;GTF2A1,2:-0.791549002759;RXR{A,B,G}:-0.792681322006;PAX4:-0.797917026843;HIC1:-0.807115229951;ZNF384:-0.824704457797;GZF1:-0.8513722144;FOX{I1,J2}:-0.856901886037;GTF2I:-0.874294966008;MAFB:-0.898597462327;ZIC1..3:-0.951432761538;ADNP_IRX_SIX_ZHX:-0.964214261232;XCPE1{core}:-0.970002732111;SOX2:-0.971691227922;TLX1..3_NFIC{dimer}:-0.998389786469;STAT2,4,6:-1.01331586195;FOXO1,3,4:-1.01374002047;NFIX:-1.0262425732;EBF1:-1.04815579736;TEAD1:-1.05973421437;RREB1:-1.07412945118;ZBTB6:-1.07438566472;EGR1..3:-1.0790299204;NR3C1:-1.12261058689;PAX1,9:-1.15496281054;HMX1:-1.15714604721;SP1:-1.15737573284;FOXM1:-1.16296821048;TFAP2B:-1.16818107781;ALX4:-1.21613799243;MAZ:-1.21679280002;CDC5L:-1.22236383027;TFCP2:-1.23973345613;GLI1..3:-1.30005525191;PATZ1:-1.30975713914;NFATC1..3:-1.32893636814;GFI1B:-1.38152271409;JUN:-1.39799317945;SMAD1..7,9:-1.40814535979;FOXL1:-1.42651316955;BPTF:-1.47709836406;FOX{D1,D2}:-1.52114341732
 +
|xref=
 
}}
 
}}

Latest revision as of 10:15, 10 August 2017

Name:acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh)
Species:Human (Homo sapiens)
Library ID:CNhs10722
Sample type:cell lines
Genomic View: UCSC
MicroRNAs:Including candidate novel miRNAs(CAGE samples)
Excluding candidate novel miRNAs(CAGE samples)
RefEX:Specific genes
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissueblood
dev stage1 year old child
sexmale
age1
cell typemonoblast
cell lineTHP-1
companyNA
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Accession numbers
MethodSample accession id
CAGE  SAMD00005753
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10722 CAGE DRX007813 DRR008685
Accession ID Hg19

Library idBAMCTSS
CNhs10722 DRZ000110 DRZ001495
Accession ID Hg38

Library idBAMCTSS
CNhs10722 DRZ011460 DRZ012845
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis--0.0265
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.699
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived1.08
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0426
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle--0.0437
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed--0.229
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte--0.291
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.395
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.512
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.529
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.284
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.116
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.116
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.142
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in this sample. Pearson's correlation between the number of TFBSs estimated by using the position-weight matrix for each promoter and its expression is expressed as Z-score by taking the ones based on random position-weight matrix, and the tail probability of the normal distribution corresponding to the Z-score is taken as the resulting P-value. Lower P-value indicates more (non-random) association of the motif to promoter expression
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs10722

Jaspar motif P-value
MA0002.2 0.118
MA0003.1 0.998
MA0004.1 0.198
MA0006.1 0.171
MA0007.1 0.352
MA0009.1 0.0797
MA0014.1 0.71
MA0017.1 0.00114
MA0018.2 0.105
MA0019.1 0.313
MA0024.1 9.71378e-10
MA0025.1 0.0455
MA0027.1 0.898
MA0028.1 8.17334e-8
MA0029.1 0.722
MA0030.1 0.0217
MA0031.1 0.00409
MA0035.2 0.979
MA0038.1 0.242
MA0039.2 0.448
MA0040.1 0.126
MA0041.1 0.94
MA0042.1 0.436
MA0043.1 0.0315
MA0046.1 0.579
MA0047.2 0.183
MA0048.1 0.0591
MA0050.1 0.455
MA0051.1 0.78
MA0052.1 0.414
MA0055.1 0.011
MA0057.1 0.796
MA0058.1 0.103
MA0059.1 0.00242
MA0060.1 9.63103e-6
MA0061.1 0.639
MA0062.2 6.08435e-14
MA0065.2 0.0387
MA0066.1 0.473
MA0067.1 0.373
MA0068.1 0.727
MA0069.1 0.354
MA0070.1 0.482
MA0071.1 0.0878
MA0072.1 0.529
MA0073.1 0.641
MA0074.1 0.201
MA0076.1 4.96973e-8
MA0077.1 0.666
MA0078.1 0.581
MA0079.2 0.17
MA0080.2 2.5022e-12
MA0081.1 0.0012
MA0083.1 0.517
MA0084.1 0.0497
MA0087.1 0.131
MA0088.1 0.0104
MA0090.1 2.61034e-5
MA0091.1 0.431
MA0092.1 0.478
MA0093.1 0.145
MA0099.2 1.28074e-5
MA0100.1 4.59036e-6
MA0101.1 0.224
MA0102.2 5.54225e-5
MA0103.1 0.951
MA0104.2 3.15206e-4
MA0105.1 0.201
MA0106.1 0.752
MA0107.1 0.00853
MA0108.2 5.11052e-7
MA0111.1 0.154
MA0112.2 0.213
MA0113.1 0.957
MA0114.1 0.0033
MA0115.1 0.106
MA0116.1 0.00106
MA0117.1 0.661
MA0119.1 0.934
MA0122.1 0.327
MA0124.1 0.523
MA0125.1 0.475
MA0131.1 0.00672
MA0135.1 0.524
MA0136.1 9.30278e-21
MA0137.2 0.627
MA0138.2 0.275
MA0139.1 0.735
MA0140.1 0.648
MA0141.1 0.104
MA0142.1 0.795
MA0143.1 0.785
MA0144.1 0.804
MA0145.1 0.718
MA0146.1 0.201
MA0147.1 2.07178e-4
MA0148.1 0.0796
MA0149.1 0.48
MA0150.1 0.0843
MA0152.1 0.471
MA0153.1 0.168
MA0154.1 0.46
MA0155.1 0.171
MA0156.1 7.10863e-17
MA0157.1 0.0156
MA0159.1 0.909
MA0160.1 0.288
MA0162.1 0.565
MA0163.1 1.0312e-9
MA0164.1 0.779
MA0258.1 0.0743
MA0259.1 0.0607



FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in 169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs10722

Novel motif P-value
1 0.041
10 0.0156
100 0.158
101 0.264
102 0.803
103 0.719
104 0.697
105 0.781
106 0.0874
107 0.146
108 0.426
109 0.0228
11 0.122
110 0.251
111 0.477
112 0.65
113 0.152
114 0.223
115 0.359
116 0.626
117 0.0555
118 0.176
119 0.878
12 0.802
120 0.514
121 0.899
122 0.0751
123 0.953
124 0.227
125 0.485
126 0.533
127 0.0855
128 0.101
129 0.899
13 0.00104
130 0.516
131 0.00929
132 0.921
133 0.345
134 0.456
135 0.222
136 0.197
137 0.448
138 0.909
139 0.675
14 0.726
140 0.192
141 0.825
142 0.795
143 0.333
144 0.717
145 0.596
146 0.753
147 0.143
148 0.0258
149 0.188
15 0.251
150 0.533
151 0.484
152 0.0569
153 0.462
154 0.863
155 0.0714
156 0.791
157 0.595
158 0.431
159 0.505
16 0.747
160 0.765
161 0.111
162 0.538
163 0.561
164 0.473
165 0.0451
166 0.293
167 0.401
168 0.976
169 0.98
17 0.576
18 0.909
19 0.846
2 0.261
20 0.296
21 0.284
22 0.826
23 0.00888
24 0.0299
25 0.412
26 0.608
27 0.527
28 0.873
29 0.0141
3 0.0355
30 0.0849
31 0.487
32 0.102
33 0.36
34 0.534
35 0.494
36 0.0474
37 0.4
38 0.229
39 0.247
4 0.115
40 0.333
41 0.861
42 0.131
43 0.863
44 0.446
45 0.284
46 0.169
47 0.0746
48 0.0505
49 0.809
5 0.68
50 0.801
51 0.847
52 0.0977
53 0.395
54 0.504
55 0.564
56 0.771
57 0.239
58 0.24
59 0.752
6 0.559
60 0.293
61 0.0996
62 0.351
63 0.95
64 0.314
65 0.79
66 0.00684
67 0.376
68 0.171
69 0.361
7 0.174
70 0.261
71 0.0732
72 0.741
73 0.761
74 0.756
75 0.038
76 0.237
77 0.486
78 0.034
79 0.232
8 0.558
80 0.249
81 0.408
82 0.651
83 0.817
84 0.857
85 0.0248
86 0.967
87 0.0361
88 0.397
89 0.394
9 0.621
90 0.0681
91 0.18
92 0.0885
93 0.648
94 0.884
95 0.00392
96 0.635
97 0.556
98 0.546
99 0.439



de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown.
Analyst:NA
library id: CNhs10722


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship
Analyst: Hideya Kawaji

link to source data
data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
8692 (myeloid leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101370 (THP-1 cell sample)
0101035 (hematopoietic cell line sample)
0101883 (acute myeloid leukemia cell line sample)
0102332 (monocytic leukemia cell line sample)
0100740 (myeloid leukemia cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship
Analyst: Hideya Kawaji

link to source data
data

CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)