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(Created page with "{{f5samples |id=FF:12206-129D1 |name=CD8+ T Cells (pluriselect), donor090612, donation2 |sample_id=12206 |rna_tube_id=129D1 |rna_box=129 |rna_position=D1 |sample_cell_l...")
 
 
(33 intermediate revisions by the same user not shown)
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{{f5samples
 
{{f5samples
|id=FF:12206-129D1
+
|DRA_sample_Accession=RNA-Seq@SAMD00013694
|name=CD8+ T Cells (pluriselect), donor090612, donation2
+
|accession_numbers=CAGE;DRX008070;DRR008942;DRZ000367;DRZ001752;DRZ011717;DRZ013102!RNA-Seq;DRX012351;DRR013799;DRZ003000;
|sample_id=12206
+
|ancestors_in_anatomy_facet=
|rna_tube_id=129D1
+
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625
|rna_box=129
 
|rna_position=D1
 
|sample_cell_lot=090612-03
 
|sample_cell_catalog=
 
|sample_company=
 
|rna_lot_number=
 
|rna_catalog_number=
 
|sample_species=Human (Homo sapiens)
 
|sample_strain=
 
|sample_dev_stage=
 
|sample_tissue=blood
 
|sample_donor(cell lot)=
 
|sample_sex=
 
|sample_age=
 
|sample_ethnicity=
 
|rna_rin=
 
|rna_od260/230=1.21000
 
|rna_od260/280=2.02000
 
|sample_cell_type=T cell, CD8+
 
|sample_cell_line=
 
|sample_collaboration=Matched_genome_OSC(contact:Al Forrest)
 
|sample_experimental_condition=
 
|sample_disease=
 
|rna_sample_type=
 
|rna_extraction_protocol=
 
|rna_weight_ug=3.60342
 
|rna_concentration=0.13346
 
|sample_note=
 
|profile_hcage=CNhs12184,LSID975,release011,COMPLETED
 
|profile_cagescan=,,,
 
|profile_srnaseq=,,,
 
|profile_rnaseq=,,,
 
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000625,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000827,CL:0000837,CL:0000838,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420
 
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
 
 
|ancestors_in_disease_facet=
 
|ancestors_in_disease_facet=
|sample_description=
+
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030
 
+
|comment=
 +
|created_by=
 +
|creation_date=
 +
|data_phase=2
 +
|datafreeze_phase=2
 +
|def=
 +
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.00!99.92!PLEK;;chr5:133451294..133451310,+!p2@TCF7!1.95!87.61!TCF7;;chr17:45810594..45810608,+!p1@TBX21!1.82!65.59!TBX21;;chr3:27763807..27763822,-!p1@EOMES!1.82!65.11!EOMES;;chr2:192015701..192015743,-!p1@STAT4!1.81!85.95!STAT4;;chr3:63953435..63953499,+!p1@ATXN7!1.80!62.04!ATXN7;;chr9:117150254..117150271,-!p1@AKNA!1.72!136.86!AKNA;;chr4:109087445..109087463,-!p1@LEF1!1.72!51.62!LEF1;;chr7:50343634..50343717,+!p2@IKZF1!1.71!50.67!IKZF1;;chr1:25256756..25256774,-!p1@RUNX3!1.68!86.19!RUNX3;;chr2:231090433..231090469,+!p1@SP140!1.68!46.65!SP140;;chr2:192015750..192015793,-!p2@STAT4!1.67!61.33!STAT4;;chr5:133450365..133450444,+!p1@TCF7!1.66!194.39!TCF7;;chr2:68592394..68592405,+!p2@PLEK!1.61!39.54!PLEK;;chr17:37934365..37934387,-!p2@IKZF3!1.61!39.31!IKZF3;;chr11:47400078..47400106,-!p1@SPI1!1.55!34.57!SPI1;;chr14:75988771..75988826,+!p1@BATF!1.53!43.80!BATF;;chr19:16435625..16435682,+!p1@KLF2!1.51!950.90!KLF2;;chr7:50344251..50344288,+!p3@IKZF1!1.47!28.41!IKZF1;;chr20:50159198..50159299,-!p1@NFATC2!1.46!40.02!NFATC2;;chr1:26697243..26697258,-!p1@ZNF683!1.46!27.70!ZNF683;;chr5:133451347..133451358,+!p3@TCF7!1.45!27.23!TCF7;;chr6:106546808..106546833,+!p3@PRDM1!1.36!27.47!PRDM1;;chr19:19779619..19779670,+!p1@ZNF101!1.34!57.77!ZNF101;;chr4:109090075..109090095,-!p2@LEF1!1.34!20.84!LEF1;;chr20:56195474..56195506,-!p1@ZBP1!1.33!20.36!ZBP1;;chr4:57522166..57522260,-!p2@HOPX!1.31!22.49!HOPX;;chr3:18486354..18486377,-!p2@SATB1!1.30!23.68!SATB1;;chr2:231090471..231090504,+!p2@SP140!1.29!18.71!SP140;;chr7:50343895..50343936,+!p5@IKZF1!1.29!18.71!IKZF1;;chr15:60884706..60884743,-!p1@RORA!1.27!89.50!RORA;;chr3:71355163..71355209,-!p5@FOXP1!1.27!24.62!FOXP1;;chr7:50344289..50344323,+!p1@IKZF1!1.27!17.52!IKZF1;;chr13:74707894..74707947,-!p6@KLF12!1.26!19.18!KLF12;;chr17:37934204..37934241,-!p3@IKZF3!1.26!17.28!IKZF3;;chr13:41593425..41593480,-!p1@ELF1!1.25!105.84!ELF1;;chr10:8096772..8096787,+!p2@GATA3!1.25!19.65!GATA3;;chr3:71542615..71542644,-!p12@FOXP1!1.25!16.81!FOXP1;;chr6:391743..391759,+!p1@IRF4!1.24!16.34!IRF4;;chr10:8096631..8096660,+!p1@GATA3!1.23!19.42!GATA3;;chr4:57522598..57522664,-!p3@HOPX!1.23!16.10!HOPX;;chr3:71542684..71542720,-!p18@FOXP1!1.20!14.68!FOXP1;;chr17:38020392..38020477,-!p1@IKZF3!1.20!14.68!IKZF3;;chr8:67525443..67525459,-!p2@MYBL1!1.18!21.31!MYBL1;;chr17:37934280..37934299,-!p6@IKZF3!1.18!13.97!IKZF3;;chr11:128392273..128392308,-!p2@ETS1!1.16!57.06!ETS1;;chr11:128392085..128392232,-!p1@ETS1!1.14!427.62!ETS1;;chr11:128563948..128564003,+!p1@FLI1!1.12!146.57!FLI1;;chr17:38020557..38020572,-!p4@IKZF3!1.12!12.08!IKZF3;;chr21:36421535..36421610,-!p2@RUNX1!1.10!41.91!RUNX1;;chr14:64970670..64970712,-!p3@ZBTB25!1.08!24.15!ZBTB25;;chr4:109089901..109089930,-!p3@LEF1!1.08!11.13!LEF1;;chr17:38020516..38020544,-!p5@IKZF3!1.08!10.89!IKZF3;;chr8:60031619..60031676,-!p1@TOX!1.07!23.20!TOX;;chr6:106546731..106546755,+!p5@PRDM1!1.07!10.65!PRDM1;;chr21:36421347..36421380,-!p8@RUNX1!1.07!10.65!RUNX1;;chr6:91006518..91006570,-!p1@BACH2!1.06!24.39!BACH2;;chr1:92951607..92951661,-!p1@GFI1!1.06!10.42!GFI1;;chr4:57522674..57522699,-!p5@HOPX!1.06!10.42!HOPX;;chr2:97202991..97203043,+!p3@ARID5A!1.05!10.18!ARID5A;;chr3:71542651..71542683,-!p22@FOXP1!1.05!10.18!FOXP1;;chr14:75988831..75988847,+!p2@BATF!1.03!9.71!BATF;;chr19:38085768..38085821,+!p1@ZNF540!1.02!14.21!ZNF540;;chrX:106960285..106960299,-!p1@TSC22D3!1.01!254.06!TSC22D3;;chr16:89789271..89789291,+!p5@ZNF276!1.01!9.23!ZNF276;;chr12:54778471..54778528,-!p1@ZNF385A!1.01!9.23!ZNF385A;;chr14:69262947..69262986,-!p3@ZFP36L1!1.00!10.89!ZFP36L1;;chr11:47400062..47400077,-!p2@SPI1!1.00!9.00!SPI1;;chr17:38020481..38020506,-!p7@IKZF3!0.99!8.76!IKZF3;;chr3:18480217..18480239,-!p3@SATB1!0.98!8.52!SATB1;;chr4:109088940..109089037,-!p4@LEF1!0.97!8.29!LEF1;;chr3:71179699..71179744,-!p2@FOXP1!0.96!62.04!FOXP1;;chr19:53289995..53290050,-!p1@ZNF600!0.96!34.10!ZNF600;;chr9:3525727..3525828,-!p2@RFX3!0.96!21.07!RFX3;;chr2:178128250..178128293,-!p6@NFE2L2!0.96!20.84!NFE2L2;;chr8:67525473..67525518,-!p1@MYBL1!0.96!19.18!MYBL1;;chr4:109089573..109089585,-!p8@LEF1!0.96!8.05!LEF1;;chr16:88752889..88752921,-!p1@SNAI3!0.95!9.23!SNAI3;;chr16:79634624..79634642,-!p1@MAF!0.93!30.78!MAF;;chr7:137620650..137620677,-!p3@CREB3L2!0.93!7.58!CREB3L2;;chr7:50343864..50343888,+!p7@IKZF1!0.93!7.58!IKZF1;;chr8:72756023..72756055,-!p6@MSC!0.92!9.23!MSC;;chr4:109088089..109088101,-!p11@LEF1!0.92!7.34!LEF1;;chr2:231090344..231090361,-!p3@SP110!0.91!7.10!SP110;;chr3:18487057..18487105,-!p4@SATB1!0.91!7.10!SATB1;;chrX:49121165..49121179,-!p1@FOXP3!0.91!7.10!FOXP3;;chr20:56195525..56195556,-!p2@ZBP1!0.91!7.10!ZBP1;;chr12:54694758..54694805,-!p1@NFE2!0.90!8.52!NFE2;;chr7:50348268..50348366,+!p4@IKZF1!0.90!6.87!IKZF1;;chr19:20748574..20748599,-!p1@ZNF737!0.89!43.09!ZNF737;;chr4:185395633..185395651,-!p2@IRF2!0.89!11.13!IRF2;;chr4:81104895..81104920,+!p2@PRDM8!0.88!10.18!PRDM8;;chr16:85932760..85932775,+!p1@IRF8!0.88!6.63!IRF8;;chr7:50344144..50344157,+!p6@IKZF1!0.88!6.63!IKZF1;;chr16:68119324..68119364,+!p1@NFATC3!0.87!30.54!NFATC3;;chr15:60884747..60884774,-!p3@RORA!0.87!16.34!RORA;;chr13:74708029..74708077,-!p2@KLF12!0.86!18.94!KLF12;;chr16:3313791..3313834,+!p2@ZNF263!0.85!14.21!ZNF263;;chr16:79634595..79634620,-!p2@MAF!0.85!11.60!MAF;;chr9:117150303..117150312,-!p3@AKNA!0.85!7.81!AKNA;;chr2:145277640..145277771,-!p1@ZEB2!0.84!85.24!ZEB2;;chrX:101186981..101187030,-!p1@ZMAT1!0.84!20.36!ZMAT1;;chr17:36861675..36861697,+!p3@MLLT6!0.84!14.44!MLLT6;;chr20:52226313..52226350,-!p3@ZNF217!0.84!5.92!ZNF217;;chr9:114287433..114287513,+!p1@ZNF483!0.83!15.63!ZNF483;;chr19:9546177..9546224,-!p1@ZNF266!0.82!43.09!ZNF266;;chr16:89787937..89787971,+!p1@ZNF276!0.82!15.39!ZNF276;;chr6:106546786..106546802,+!p6@PRDM1!0.82!5.68!PRDM1;;chr8:60031563..60031574,-!p7@TOX!0.82!5.68!TOX;;chr6:143266297..143266356,-!p1@HIVEP2!0.81!28.41!HIVEP2;;chr7:21467674..21467727,+!p1@SP4!0.81!23.44!SP4;;chr2:148778973..148779035,+!p3@MBD5!0.81!15.15!MBD5;;chr16:79633894..79633954,-!p3@MAF!0.81!10.89!MAF;;chr19:19779686..19779697,+!p3@ZNF101!0.81!6.39!ZNF101;;chr14:99738138..99738163,-!p1@BCL11B!0.81!5.45!BCL11B;;chr17:56565257..56565283,-!p2@HSF5!0.81!5.45!HSF5;;chr3:71542747..71542766,-!p34@FOXP1!0.81!5.45!FOXP1;;chr4:149363494..149363543,-!p1@NR3C2!0.81!5.45!NR3C2;;chr6:106546834..106546850,+!p4@PRDM1!0.81!5.45!PRDM1;;chr17:36861735..36861755,+!p4@MLLT6!0.80!9.47!MLLT6;;chr19:44331461..44331482,+!p3@ZNF283!0.80!9.00!ZNF283;;chr4:38665769..38665801,+!p2@KLF3!0.79!51.38!KLF3;;chr19:49140609..49140643,-!p1@DBP!0.79!31.73!DBP;;chr7:115670804..115670825,-!p1@TFEC!0.79!5.21!TFEC;;chr4:109088130..109088163,-!p13@LEF1!0.79!5.21!LEF1;;chr4:57522513..57522548,-!p4@HOPX!0.79!5.21!HOPX;;chr16:89789248..89789270,+!p8@ZNF276!0.79!5.21!ZNF276;;chr19:9546227..9546257,-!p2@ZNF266!0.78!27.94!ZNF266;;chr17:46621311..46621332,-!p8@HOXB2!0.78!6.63!HOXB2;;chr2:100759037..100759058,-!p2@AFF3!0.78!4.97!AFF3;;chr11:128392309..128392350,-!p3@ETS1!0.77!12.55!ETS1;;chr19:19729477..19729542,-!p1@PBX4!0.77!11.13!PBX4;;chr18:5295679..5295734,-!p2@ZFP161!0.76!11.13!ZFP161;;chr5:131826457..131826514,-!p1@IRF1!0.75!202.44!IRF1;;chr14:90085458..90085557,-!p1@FOXN3!0.75!53.99!FOXN3;;chr5:172483347..172483407,+!p1@C5orf41!0.75!38.36!CREBRF;;chr19:52674696..52674758,-!p1@ZNF836!0.75!14.92!ZNF836;;chrX:131623982..131624011,-!p6@MBNL3!0.75!7.10!MBNL3;;chr3:114819124..114819200,-!p3@ZBTB20!0.74!11.37!ZBTB20;;chr20:51588873..51588953,+!p1@TSHZ2!0.74!6.16!TSHZ2;;chr4:81104865..81104886,+!p6@PRDM8!0.74!4.97!PRDM8;;chr3:18466787..18466839,-!p1@SATB1!0.73!21.78!SATB1;;chr8:67525524..67525543,-!p3@MYBL1!0.73!7.58!MYBL1;;chr9:32550965..32551031,-!p4@TOPORS!0.73!7.10!TOPORS;;chr10:8095593..8095625,+!p3@GATA3!0.73!5.21!GATA3;;chr7:137620684..137620711,-!p4@CREB3L2!0.72!4.26!CREB3L2;;chr1:26697189..26697205,-!p2@ZNF683!0.72!4.26!ZNF683;;chr10:3827417..3827428,-!p3@KLF6!0.70!39.07!KLF6;;chr19:12405606..12405629,-!p2@ZNF44!0.70!8.52!ZNF44;;chr19:12444440..12444455,-!p1@ZNF563!0.70!7.34!ZNF563;;chr20:44600199..44600219,-!p3@ZNF335!0.70!5.68!ZNF335;;chr6:12009042..12009092,+!p6@HIVEP1!0.70!5.45!HIVEP1;;chr6:45296048..45296082,+!p1@RUNX2!0.70!4.74!RUNX2;;chr1:25291475..25291511,-!p2@RUNX3!0.70!4.03!RUNX3;;chr4:109086281..109086319,-!p9@LEF1!0.70!4.03!LEF1;;chr2:231084659..231084721,-!p1@SP110!0.69!105.37!SP110;;chr11:13299319..13299424,+!p1@ARNTL!0.69!44.75!ARNTL;;chr6:157098579..157098634,+!p4@ARID1B!0.69!9.71!ARID1B;;chr10:43134001..43134026,-!p1@ZNF33B!0.68!19.18!ZNF33B;;chr19:56632858..56632903,-!p2@ZNF787!0.68!10.18!ZNF787;;chr1:61542922..61542955,+!p10@NFIA!0.68!3.79!NFIA;;chr4:149365827..149365870,-!p5@NR3C2!0.68!3.79!NR3C2;;chr19:37464063..37464127,+!p2@ZNF568!0.67!4.97!ZNF568;;chr2:97202480..97202499,+!p1@ARID5A!0.66!42.15!ARID5A;;chr19:53466095..53466149,-!p1@ZNF321P,p1@ZNF816-ZNF321P,p1@ZNF816!0.66!17.05!ZNF816;;chr4:57775059..57775139,+!p2@REST!0.66!14.21!REST;;chr17:42295777..42295816,-!p7@UBTF!0.66!4.50!UBTF;;chr13:74708246..74708264,-!p8@KLF12!0.66!4.03!KLF12;;chr10:8097591..8097627,+!p7@GATA3!0.66!3.55!GATA3;;chr17:38020607..38020621,-!p9@IKZF3!0.66!3.55!IKZF3;;chr1:158979686..158979745,+!p1@IFI16!0.65!134.73!IFI16;;chr7:99097863..99097936,-!p1@ZNF394!0.65!40.49!ZNF394;;chr7:77428066..77428132,+!p2@PHTF2!0.65!25.81!PHTF2;;chr19:37569314..37569381,+!p1@ZNF420!0.65!14.21!ZNF420;;chr19:58220517..58220583,-!p1@ZNF154!0.65!12.31!ZNF154;;chr6:12008986..12009016,+!p3@HIVEP1!0.65!12.31!HIVEP1;;chr8:123793860..123793921,+!p2@ZHX2!0.65!10.65!ZHX2;;chr14:69262789..69262822,-!p2@ZFP36L1!0.65!10.18!ZFP36L1;;chr6:15249128..15249177,+!p4@JARID2!0.65!6.87!JARID2;;chr6:45390269..45390298,+!p5@RUNX2!0.65!6.16!RUNX2;;chr1:10754477..10754517,-!p1@CASZ1!0.65!6.16!CASZ1;;chr6:91006575..91006602,-!p2@BACH2!0.65!5.45!BACH2;;chr2:70142232..70142251,+!p1@MXD1!0.64!22.02!MXD1;;chr19:12405645..12405685,-!p1@ZNF44!0.64!13.50!ZNF44;;chr14:58765217..58765301,+!p1@ARID4A!0.63!34.57!ARID4A;;chr9:88969339..88969422,-!p2@ZCCHC6!0.63!30.07!ZCCHC6;;chr9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22220,+!p2@ARID1A!0.26!11.60!ARID1A;;chr19:57999101..57999158,+!p1@ZNF419!0.26!10.65!ZNF419;;chr8:146228270..146228295,-!p1@ZNF252!0.26!8.52!ZNF252P;;chr17:42298615..42298692,-!p2@UBTF!0.26!7.81!UBTF;;chr19:58400372..58400411,-!p1@ZNF814!0.26!7.81!ZNF814;;chr19:59084647..59084721,-!p1@MZF1!0.26!7.34!MZF1;;chr1:205601000..205601055,-!p2@ELK4!0.26!6.16!ELK4;;chrX:47863348..47863412,-!p1@ZNF182!0.26!5.92!ZNF182;;chr19:44556158..44556206,+!p1@ZNF223!0.26!5.68!ZNF223;;chr19:44439420..44439447,-!p1@ZNF45!0.26!5.45!ZNF45;;chr3:150126136..150126158,+!p4@TSC22D2!0.26!5.21!TSC22D2;;chr4:103422471..103422495,+!p2@NFKB1!0.26!3.79!NFKB1;;chr19:8942962..8942987,-!p1@ZNF558!0.26!3.79!ZNF558;;chr19:36705547..36705597,-!p1@ZNF565!0.26!3.55!ZNF565;;chr3:107241882..107241904,+!p2@BBX!0.26!3.31!BBX;;chr9:32550839..32550962,-!p3@TOPORS!0.26!3.31!TOPORS;;chr14:74253834..74253862,-!p5@C14orf43!0.26!3.31!C14orf43;;chr15:56535946..56535987,-!p1@RFX7!0.26!3.08!RFX7;;chr6:42419514..42419606,-!p1@TRERF1!0.26!2.84!TRERF1;;chrX:101975643..101975683,+!p1@BHLHB9!0.26!2.84!BHLHB9;;chr9:73028387..73028418,-!p4@KLF9!0.26!2.60!KLF9;;chr7:21467802..21467840,+!p3@SP4!0.26!2.60!SP4;;chr1:37940102..37940131,+!p2@ZC3H12A!0.26!2.60!ZC3H12A;;chr20:25677399..25677433,-!p3@ZNF337!0.26!2.37!ZNF337;;chr2:208030886..208030917,-!p4@KLF7!0.26!2.37!KLF7;;chr17:42297282..42297300,-!p9@UBTF!0.26!2.13!UBTF;;chr6:27356745..27356777,+!p1@ZNF391!0.26!1.89!ZNF391;;chr18:51751066..51751077,-!p6@MBD2!0.26!1.66!MBD2;;chr15:100106126..100106135,+!p6@MEF2A!0.26!1.42!MEF2A;;chr17:38465441..38465481,+!p6@RARA!0.26!1.18!RARA;;chr5:150284461..150284481,-!p4@ZNF300!0.26!1.18!ZNF300;;chr2:37458692..37458745,-!p1@CEBPZ!0.25!59.90!CEBPZ;;chr7:127032741..127032777,-!p1@ZNF800!0.25!55.41!ZNF800;;chr16:3930681..3930721,-!p1@CREBBP!0.25!27.94!CREBBP;;chr3:169491171..169491205,+!p1@MYNN!0.25!27.47!MYNN;;chr1:91487553..91487612,-!p1@ZNF644!0.25!26.99!ZNF644;;chr9:125675576..125675612,-!p1@ZBTB6!0.25!19.89!ZBTB6;;chr7:64254793..64254813,+!p1@ZNF138!0.25!18.00!ZNF138;;chr4:7045042..7045145,+!p1@TADA2B!0.25!11.37!TADA2B;;chr1:157108130..157108173,-!p1@ETV3!0.25!10.89!ETV3;;chr9:95640300..95640345,-!p1@ZNF484!0.25!8.29!ZNF484;;chr19:53360870..53360873,-!p1@ZNF468!0.25!5.21!ZNF468;;chr19:19496577..19496619,+!p5@GATAD2A!0.25!4.74!GATAD2A;;chr19:36909484..36909525,-!p2@ZFP82!0.25!2.37!ZFP82;;chr16:30621615..30621660,-!p2@ZNF689!0.25!2.13!ZNF689;;chr18:3449695..3449712,+!p9@TGIF1!0.25!1.66!TGIF1;;chr1:78149224..78149235,-!p3@ZZZ3!0.25!1.42!ZZZ3;;chr15:77197781..77197801,-!p3@SCAPER!0.25!0.95!SCAPER;;chr6:44355478..44355489,+!p5@CDC5L!0.25!0.95!CDC5L;;chr5:150080543..150080664,-!p1@RBM22!0.24!67.72!RBM22;;chr2:113012592..113012671,-!p1@ZC3H8!0.24!26.52!ZC3H8;;chr16:67876180..67876242,+!p1@THAP11!0.24!25.81!THAP11;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!0.24!14.44!ZNF595;;chr7:64023441..64023462,-!p1@ZNF680!0.24!11.84!ZNF680;;chr1:6640046..6640101,+!p1@ZBTB48!0.24!11.60!ZBTB48;;chr19:44716678..44716732,+!p1@ZNF227!0.24!10.18!ZNF227;;chr19:12175535..12175554,+!p1@ZNF844!0.24!7.81!ZNF844;;chr3:113415441..113415500,-!p1@KIAA2018!0.24!7.81!KIAA2018;;chr4:140005341..140005411,-!p3@ELF2!0.24!7.81!ELF2;;chr19:9434841..9434886,+!p1@ZNF559!0.24!7.34!ZNF559;;chr6:20403916..20403965,+!p3@E2F3!0.24!6.39!E2F3;;chr19:33793430..33793447,-!p1@CEBPA!0.24!5.92!CEBPA;;chr17:42297028..42297056,-!p3@UBTF!0.24!5.68!UBTF;;chr3:101395936..101395962,-!p2@ZBTB11!0.24!5.45!ZBTB11;;chr1:117602932..117602973,+!p1@TTF2!0.24!5.21!TTF2;;chr1:40997285..40997352,+!p1@ZNF684!0.24!4.74!ZNF684;;chr19:57751980..57752019,+!p2@ZNF805!0.24!4.50!ZNF805;;chr19:37096194..37096235,+!p1@ZNF382!0.24!4.26!ZNF382;;chr14:35872453..35872485,-!p2@NFKBIA!0.24!3.08!NFKBIA;;chr12:19671171..19671175,+!p4@AEBP2!0.24!2.84!AEBP2;;chr1:249153232..249153251,-!p2@ZNF692!0.24!2.84!ZNF692;;chr1:28995231..28995250,+!p2@GMEB1!0.24!2.37!GMEB1;;chr14:64970361..64970389,-!p4@ZBTB25!0.24!2.37!ZBTB25;;chr19:2841497..2841523,+!p2@ZNF555!0.24!2.13!ZNF555;;
 +
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000625;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
 +
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790
 
|fonse_cell_line=
 
|fonse_cell_line=
 
|fonse_cell_line_closure=
 
|fonse_cell_line_closure=
Line 67: Line 41:
 
|fonse_treatment=
 
|fonse_treatment=
 
|fonse_treatment_closure=
 
|fonse_treatment_closure=
 +
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12184.12206-129D1.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12184.12206-129D1.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12184.12206-129D1.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12184.12206-129D1.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12184.12206-129D1.hg38.nobarcode.ctss.bed.gz
 +
|id=FF:12206-129D1
 +
|is_a=EFO:0002091;;FF:0000030;;FF:0000210
 +
|is_obsolete=
 +
|library_id=CNhs12184!RDhi10018
 +
|library_id_phase_based=2:CNhs12184
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12206
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12206
 +
|name=CD8+ T Cells (pluriselect), donor090612, donation2
 +
|namespace=FANTOM5
 +
|part_of=
 +
|profile_cagescan=,,,
 +
|profile_hcage=CNhs12184,LSID975,release011,COMPLETED
 +
|profile_rnaseq=
 +
|profile_srnaseq=,,,
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
|repeat_enrich_byfamily=0,0,0.0461457443501051,0,0,0,0,-0.068026541386176,0.289390266016242,-0.277362132193514,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0.0922914887002101,0,0,-0.153323010348428,0,0,0,0,0.168366204242204,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.0997539726159077,0,0,0,0,0,0,0,0,0.145399986873046,0,0,0,0.339230015971761,0,-0.0475772086011165,0.168366204242204,-0.0969923612426051,0,0,-0.00505213851288687,0,0.0922914887002101,0,0,0,0,0,0,0,0,0.424463592660684,0,0,0.0922914887002101,0,0,0,0,0,0,0,0,0,-0.0296001901673713,-0.0576371324484503,0,0,0,-0.0687913083498685,-0.066502269687748,0,0,0,0.0922914887002101,-0.00574386253749633,-0.09233145645079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0732414140634195,0,0,0,-0.206876320411979,-0.423844366435377,0,0,0,0,0,0
 +
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 +
|rna_box=129
 +
|rna_catalog_number=
 +
|rna_concentration=0.13346
 +
|rna_extraction_protocol=
 +
|rna_lot_number=
 +
|rna_od260/230=1.21
 +
|rna_od260/280=2.02
 +
|rna_position=D1
 +
|rna_rin=
 +
|rna_sample_type=
 +
|rna_tube_id=129D1
 +
|rna_weight_ug=3.60342
 +
|sample_age=
 +
|sample_category=primary cells
 +
|sample_cell_catalog=
 +
|sample_cell_line=
 +
|sample_cell_lot=090612-03
 +
|sample_cell_type=T cell, CD8+
 +
|sample_collaboration=Matched_genome_OSC(contact:Al Forrest)
 +
|sample_company=
 +
|sample_description=
 +
|sample_dev_stage=
 +
|sample_disease=
 +
|sample_donor(cell lot)=
 +
|sample_ethnicity=
 +
|sample_experimental_condition=
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.37887632400788e-215!GO:0043227;membrane-bound organelle;3.22629211616115e-190!GO:0043231;intracellular membrane-bound organelle;6.9673612167117e-190!GO:0043226;organelle;6.67622536069754e-175!GO:0043229;intracellular organelle;3.02082950285838e-174!GO:0005737;cytoplasm;1.85824418565284e-132!GO:0044422;organelle part;8.94069702472271e-108!GO:0044446;intracellular organelle part;3.50991299359182e-106!GO:0005634;nucleus;2.79888238860582e-99!GO:0043170;macromolecule metabolic process;1.43068079005581e-95!GO:0044444;cytoplasmic part;2.18308479957055e-92!GO:0032991;macromolecular complex;8.19234663181606e-92!GO:0044237;cellular metabolic process;8.38403621251794e-92!GO:0044238;primary metabolic process;7.25100530184574e-89!GO:0030529;ribonucleoprotein complex;3.3975204488248e-84!GO:0003723;RNA binding;6.1325365586373e-78!GO:0044428;nuclear part;4.16061236447009e-77!GO:0043233;organelle lumen;1.67150534931696e-65!GO:0031974;membrane-enclosed lumen;1.67150534931696e-65!GO:0043283;biopolymer metabolic process;8.65173304314729e-64!GO:0010467;gene expression;6.77692426408963e-61!GO:0005515;protein binding;4.95141950973166e-56!GO:0006396;RNA processing;5.68246632530714e-54!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.51781372900499e-53!GO:0006412;translation;2.8898644851973e-52!GO:0005739;mitochondrion;3.71299291228285e-50!GO:0033036;macromolecule localization;4.37494537913945e-49!GO:0019538;protein metabolic process;1.60533400411211e-48!GO:0015031;protein transport;2.7221511076696e-47!GO:0016071;mRNA metabolic process;1.6345610512636e-46!GO:0031981;nuclear lumen;1.85979211744326e-46!GO:0044267;cellular protein metabolic process;5.98423031113901e-46!GO:0045184;establishment of protein localization;6.47345828979095e-46!GO:0005840;ribosome;1.62607870437673e-45!GO:0044260;cellular macromolecule metabolic process;2.5096604410704e-45!GO:0008104;protein localization;2.95527986217759e-45!GO:0043234;protein complex;3.11287831566081e-44!GO:0008380;RNA splicing;1.40120010372601e-40!GO:0006397;mRNA processing;8.31296312085726e-40!GO:0003676;nucleic acid binding;2.38816093143371e-39!GO:0003735;structural constituent of ribosome;3.30029054605232e-39!GO:0009059;macromolecule biosynthetic process;1.6025297972314e-38!GO:0031090;organelle membrane;5.72264166361701e-37!GO:0044429;mitochondrial part;3.17333367925011e-36!GO:0031967;organelle envelope;1.60960806353267e-35!GO:0031975;envelope;3.55941035883284e-35!GO:0033279;ribosomal subunit;3.09301437623062e-34!GO:0005829;cytosol;4.42220221970548e-34!GO:0016070;RNA metabolic process;1.4461950547547e-32!GO:0046907;intracellular transport;2.76871008540153e-32!GO:0016043;cellular component organization and biogenesis;4.69956091458492e-31!GO:0006886;intracellular protein transport;5.2886017433299e-31!GO:0005681;spliceosome;1.8262966086096e-30!GO:0005654;nucleoplasm;9.50958422593009e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.7054346929072e-29!GO:0044249;cellular biosynthetic process;5.6871789396507e-29!GO:0065003;macromolecular complex assembly;1.73532120006831e-28!GO:0009058;biosynthetic process;3.00686120733208e-28!GO:0006259;DNA metabolic process;3.51028591763313e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.42381023055806e-26!GO:0000166;nucleotide binding;1.43026850324857e-25!GO:0022607;cellular component assembly;4.68309550870646e-25!GO:0044445;cytosolic part;3.897089024063e-24!GO:0051641;cellular localization;5.84276555076424e-24!GO:0051649;establishment of cellular localization;8.3544568716291e-24!GO:0044451;nucleoplasm part;1.2012871848596e-23!GO:0005740;mitochondrial envelope;1.13571067683535e-22!GO:0019866;organelle inner membrane;3.13722078448896e-22!GO:0031966;mitochondrial membrane;7.9014962119444e-22!GO:0006996;organelle organization and biogenesis;1.58404257218118e-21!GO:0012501;programmed cell death;2.69780856885878e-21!GO:0006512;ubiquitin cycle;2.85773354915121e-21!GO:0006915;apoptosis;3.33963300028344e-21!GO:0008219;cell death;2.64369380578291e-20!GO:0016265;death;2.64369380578291e-20!GO:0005743;mitochondrial inner membrane;3.21371132336408e-20!GO:0006119;oxidative phosphorylation;3.21647941384385e-19!GO:0022618;protein-RNA complex assembly;4.00029815362934e-19!GO:0016874;ligase activity;1.59683539719659e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.29309864458392e-18!GO:0044265;cellular macromolecule catabolic process;2.37129107475385e-18!GO:0032553;ribonucleotide binding;2.46404533706943e-18!GO:0032555;purine ribonucleotide binding;2.46404533706943e-18!GO:0016462;pyrophosphatase activity;2.83642275722257e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.88608867183929e-18!GO:0043412;biopolymer modification;4.47605531899998e-18!GO:0015935;small ribosomal subunit;6.27071318273537e-18!GO:0017076;purine nucleotide binding;7.18144789653568e-18!GO:0005730;nucleolus;8.43247620869011e-18!GO:0017111;nucleoside-triphosphatase activity;8.86172435430179e-18!GO:0015934;large ribosomal subunit;3.19000979626286e-17!GO:0016604;nuclear body;3.48503226429324e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;4.44996228266637e-17!GO:0006605;protein targeting;5.75462892020512e-17!GO:0044455;mitochondrial membrane part;6.18788075481612e-17!GO:0019941;modification-dependent protein catabolic process;6.45540502104573e-17!GO:0043632;modification-dependent macromolecule catabolic process;6.45540502104573e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.09557255569063e-16!GO:0044257;cellular protein catabolic process;1.39937523725882e-16!GO:0031980;mitochondrial lumen;1.68696216384768e-16!GO:0005759;mitochondrial matrix;1.68696216384768e-16!GO:0043285;biopolymer catabolic process;4.77214153467003e-16!GO:0043228;non-membrane-bound organelle;4.93763984531341e-16!GO:0043232;intracellular non-membrane-bound organelle;4.93763984531341e-16!GO:0008134;transcription factor binding;6.20273188068971e-16!GO:0006913;nucleocytoplasmic transport;9.51564642871778e-16!GO:0006464;protein modification process;1.00654237953051e-15!GO:0008135;translation factor activity, nucleic acid binding;1.64300789899722e-15!GO:0051169;nuclear transport;1.80064839298401e-15!GO:0050794;regulation of cellular process;2.4789263654515e-15!GO:0006457;protein folding;2.4789263654515e-15!GO:0005524;ATP binding;6.29037495668764e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;6.82988251849223e-15!GO:0000375;RNA splicing, via transesterification reactions;6.82988251849223e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.82988251849223e-15!GO:0000502;proteasome complex (sensu Eukaryota);7.92378048662682e-15!GO:0032559;adenyl ribonucleotide binding;1.56087537374823e-14!GO:0043687;post-translational protein modification;1.86506076593051e-14!GO:0012505;endomembrane system;2.04313348092586e-14!GO:0042981;regulation of apoptosis;3.2241706649278e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;3.50949991506217e-14!GO:0009057;macromolecule catabolic process;3.61240682683897e-14!GO:0005746;mitochondrial respiratory chain;4.20540842818978e-14!GO:0043067;regulation of programmed cell death;4.78632733261836e-14!GO:0030554;adenyl nucleotide binding;5.72620096505081e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.38040380148553e-14!GO:0006974;response to DNA damage stimulus;6.78488637726886e-14!GO:0051276;chromosome organization and biogenesis;7.2632746991342e-14!GO:0005635;nuclear envelope;1.01073540230341e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.27095079197842e-13!GO:0016607;nuclear speck;1.53061956323033e-13!GO:0006323;DNA packaging;1.61188096442963e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.61987469350175e-13!GO:0050136;NADH dehydrogenase (quinone) activity;7.48896193711227e-13!GO:0003954;NADH dehydrogenase activity;7.48896193711227e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.48896193711227e-13!GO:0031965;nuclear membrane;1.23500908083382e-12!GO:0016887;ATPase activity;1.82176618796181e-12!GO:0042623;ATPase activity, coupled;2.08597469465031e-12!GO:0048770;pigment granule;2.26221371652129e-12!GO:0042470;melanosome;2.26221371652129e-12!GO:0044248;cellular catabolic process;2.69494948039301e-12!GO:0006281;DNA repair;4.60816985400188e-12!GO:0030163;protein catabolic process;5.05445052393002e-12!GO:0005761;mitochondrial ribosome;7.53476097260979e-12!GO:0000313;organellar ribosome;7.53476097260979e-12!GO:0019222;regulation of metabolic process;8.09510925591478e-12!GO:0003743;translation initiation factor activity;9.19871296149492e-12!GO:0006413;translational initiation;1.28307466412941e-11!GO:0017038;protein import;1.87592673673243e-11!GO:0005794;Golgi apparatus;2.09330333389757e-11!GO:0048193;Golgi vesicle transport;2.12719471385167e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.13641232469621e-11!GO:0042773;ATP synthesis coupled electron transport;2.13641232469621e-11!GO:0042254;ribosome biogenesis and assembly;2.42688173655579e-11!GO:0004386;helicase activity;3.00513910835455e-11!GO:0016192;vesicle-mediated transport;3.42099694625037e-11!GO:0030964;NADH dehydrogenase complex (quinone);4.34978704000091e-11!GO:0045271;respiratory chain complex I;4.34978704000091e-11!GO:0005747;mitochondrial respiratory chain complex I;4.34978704000091e-11!GO:0007049;cell cycle;4.89959236889003e-11!GO:0008639;small protein conjugating enzyme activity;5.88766407038793e-11!GO:0016568;chromatin modification;8.05092178860756e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;8.49839751904323e-11!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.16705277107665e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.16747260659142e-10!GO:0006446;regulation of translational initiation;1.21500036785918e-10!GO:0004842;ubiquitin-protein ligase activity;1.24132681446718e-10!GO:0044453;nuclear membrane part;1.84089289247767e-10!GO:0051082;unfolded protein binding;3.00421275337384e-10!GO:0050789;regulation of biological process;3.04748972389293e-10!GO:0005694;chromosome;3.29145092699874e-10!GO:0008026;ATP-dependent helicase activity;4.55670466766459e-10!GO:0019787;small conjugating protein ligase activity;5.32089039802347e-10!GO:0031323;regulation of cellular metabolic process;6.51018608930406e-10!GO:0051186;cofactor metabolic process;7.90842142529548e-10!GO:0003712;transcription cofactor activity;8.20632687655195e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.01151964700621e-09!GO:0007243;protein kinase cascade;1.51140233227638e-09!GO:0050657;nucleic acid transport;2.11314629869447e-09!GO:0051236;establishment of RNA localization;2.11314629869447e-09!GO:0050658;RNA transport;2.11314629869447e-09!GO:0006333;chromatin assembly or disassembly;2.28570971448685e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.5100715433237e-09!GO:0019829;cation-transporting ATPase activity;2.71057354638824e-09!GO:0006403;RNA localization;2.74173053432703e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.04336679977232e-09!GO:0005643;nuclear pore;4.29207872262819e-09!GO:0044427;chromosomal part;5.76650936307262e-09!GO:0006793;phosphorus metabolic process;6.21973246037179e-09!GO:0006796;phosphate metabolic process;6.21973246037179e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.39094381607493e-09!GO:0043566;structure-specific DNA binding;6.65469046235844e-09!GO:0008565;protein transporter activity;7.98595790400474e-09!GO:0006350;transcription;1.00145722599455e-08!GO:0005768;endosome;1.44229378858653e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.51830792612612e-08!GO:0051170;nuclear import;1.72291657763179e-08!GO:0065004;protein-DNA complex assembly;1.72354294067243e-08!GO:0051246;regulation of protein metabolic process;1.83079636187634e-08!GO:0010468;regulation of gene expression;1.96839706483034e-08!GO:0009719;response to endogenous stimulus;2.30515510907833e-08!GO:0006399;tRNA metabolic process;2.31122109280347e-08!GO:0009259;ribonucleotide metabolic process;2.44947032340708e-08!GO:0006606;protein import into nucleus;2.78095762633551e-08!GO:0008270;zinc ion binding;2.80715116272398e-08!GO:0016072;rRNA metabolic process;3.28242931420758e-08!GO:0016310;phosphorylation;3.44364867189977e-08!GO:0005839;proteasome core complex (sensu Eukaryota);3.62174623066976e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.35148236079205e-08!GO:0006364;rRNA processing;4.48653529830332e-08!GO:0048523;negative regulation of cellular process;4.51110188691779e-08!GO:0016881;acid-amino acid ligase activity;5.07580880157841e-08!GO:0030532;small nuclear ribonucleoprotein complex;5.51047485679923e-08!GO:0051028;mRNA transport;6.48550202072904e-08!GO:0006164;purine nucleotide biosynthetic process;7.01121087664558e-08!GO:0009260;ribonucleotide biosynthetic process;7.0115097627471e-08!GO:0016787;hydrolase activity;7.20967175861771e-08!GO:0006163;purine nucleotide metabolic process;7.98446021595748e-08!GO:0006732;coenzyme metabolic process;8.13911109554741e-08!GO:0051726;regulation of cell cycle;9.23617317323035e-08!GO:0065002;intracellular protein transport across a membrane;9.23617317323035e-08!GO:0022402;cell cycle process;9.48392078053254e-08!GO:0000785;chromatin;1.04316841253117e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.07741384630767e-07!GO:0000074;regulation of progression through cell cycle;1.15706396493986e-07!GO:0003697;single-stranded DNA binding;1.2442016998372e-07!GO:0009150;purine ribonucleotide metabolic process;1.3159426200009e-07!GO:0004298;threonine endopeptidase activity;1.78914242792491e-07!GO:0009615;response to virus;1.90150472549033e-07!GO:0003713;transcription coactivator activity;2.12632437070658e-07!GO:0006916;anti-apoptosis;2.21031200975132e-07!GO:0000245;spliceosome assembly;2.23235102778483e-07!GO:0009060;aerobic respiration;2.24057176753837e-07!GO:0032446;protein modification by small protein conjugation;2.34742940493776e-07!GO:0015986;ATP synthesis coupled proton transport;2.46251516779211e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.46251516779211e-07!GO:0046930;pore complex;2.99589757557869e-07!GO:0043069;negative regulation of programmed cell death;3.00424941471374e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.0553814162135e-07!GO:0006366;transcription from RNA polymerase II promoter;3.19075308052017e-07!GO:0015078;hydrogen ion transmembrane transporter activity;4.31891812746254e-07!GO:0043066;negative regulation of apoptosis;5.27482092064045e-07!GO:0016567;protein ubiquitination;5.7666349619052e-07!GO:0006917;induction of apoptosis;6.01383578876752e-07!GO:0044432;endoplasmic reticulum part;6.17747575053859e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.484949655268e-07!GO:0065009;regulation of a molecular function;6.52905559114532e-07!GO:0043065;positive regulation of apoptosis;8.83129591907863e-07!GO:0000151;ubiquitin ligase complex;8.98085725408909e-07!GO:0012502;induction of programmed cell death;9.88984958900377e-07!GO:0005783;endoplasmic reticulum;1.01884946816147e-06!GO:0016779;nucleotidyltransferase activity;1.10221296392715e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.24245465543441e-06!GO:0043068;positive regulation of programmed cell death;1.45377764741912e-06!GO:0016563;transcription activator activity;1.60730234082441e-06!GO:0007242;intracellular signaling cascade;1.61601689025447e-06!GO:0065007;biological regulation;1.6550104826918e-06!GO:0006461;protein complex assembly;1.69357936038134e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.74233296676809e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.83524957290324e-06!GO:0009055;electron carrier activity;1.8621108945259e-06!GO:0048519;negative regulation of biological process;1.8621108945259e-06!GO:0006754;ATP biosynthetic process;2.02631271063111e-06!GO:0006753;nucleoside phosphate metabolic process;2.02631271063111e-06!GO:0045333;cellular respiration;2.16865000401064e-06!GO:0009056;catabolic process;2.19838313525105e-06!GO:0006417;regulation of translation;2.42188460167545e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.58487520334451e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.58487520334451e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.58487520334451e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.66084553151766e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.66084553151766e-06!GO:0003724;RNA helicase activity;2.76370907552768e-06!GO:0032774;RNA biosynthetic process;2.81548709335532e-06!GO:0005773;vacuole;3.00241155351637e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.06906110301436e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.06906110301436e-06!GO:0009199;ribonucleoside triphosphate metabolic process;3.09056723352822e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.1240551297286e-06!GO:0006401;RNA catabolic process;3.12915756715318e-06!GO:0031324;negative regulation of cellular metabolic process;3.3752568891768e-06!GO:0051168;nuclear export;3.37817435864208e-06!GO:0006351;transcription, DNA-dependent;3.49470156627691e-06!GO:0046034;ATP metabolic process;3.58245412886476e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.58578175202305e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.58578175202305e-06!GO:0045449;regulation of transcription;3.92260930868295e-06!GO:0005525;GTP binding;3.93909861129728e-06!GO:0009141;nucleoside triphosphate metabolic process;4.03240235883493e-06!GO:0043038;amino acid activation;4.31507977049315e-06!GO:0006418;tRNA aminoacylation for protein translation;4.31507977049315e-06!GO:0043039;tRNA aminoacylation;4.31507977049315e-06!GO:0005793;ER-Golgi intermediate compartment;4.84516186105983e-06!GO:0045259;proton-transporting ATP synthase complex;5.42551397586562e-06!GO:0030120;vesicle coat;6.10162916383846e-06!GO:0030662;coated vesicle membrane;6.10162916383846e-06!GO:0005770;late endosome;6.19312372234341e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.37539073747454e-06!GO:0046914;transition metal ion binding;6.4656146772516e-06!GO:0000323;lytic vacuole;6.64397051101657e-06!GO:0005764;lysosome;6.64397051101657e-06!GO:0016564;transcription repressor activity;7.50787395516807e-06!GO:0019899;enzyme binding;8.25160673384344e-06!GO:0048475;coated membrane;8.46968559664163e-06!GO:0030117;membrane coat;8.46968559664163e-06!GO:0006613;cotranslational protein targeting to membrane;8.58542742672208e-06!GO:0006260;DNA replication;8.59244124686106e-06!GO:0016740;transferase activity;8.60758774430169e-06!GO:0006099;tricarboxylic acid cycle;8.67465523508163e-06!GO:0046356;acetyl-CoA catabolic process;8.67465523508163e-06!GO:0005789;endoplasmic reticulum membrane;9.48508882453136e-06!GO:0031497;chromatin assembly;1.22316091130994e-05!GO:0045786;negative regulation of progression through cell cycle;1.29731111446451e-05!GO:0006334;nucleosome assembly;1.3004307790382e-05!GO:0001772;immunological synapse;1.33152518558964e-05!GO:0051188;cofactor biosynthetic process;1.33478905545079e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.51604683558707e-05!GO:0031326;regulation of cellular biosynthetic process;1.6749791365562e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.80993769161681e-05!GO:0044431;Golgi apparatus part;2.05509607685184e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.12608816292083e-05!GO:0009967;positive regulation of signal transduction;2.56034671506697e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.59569392985313e-05!GO:0015399;primary active transmembrane transporter activity;2.59569392985313e-05!GO:0009892;negative regulation of metabolic process;2.6357506229742e-05!GO:0006084;acetyl-CoA metabolic process;2.64809592877939e-05!GO:0016481;negative regulation of transcription;3.02083529786309e-05!GO:0042110;T cell activation;3.37501971412317e-05!GO:0003924;GTPase activity;4.53985836588571e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.54978385384971e-05!GO:0006402;mRNA catabolic process;4.61138063169702e-05!GO:0008632;apoptotic program;4.73197359319051e-05!GO:0042101;T cell receptor complex;6.11519784089128e-05!GO:0032561;guanyl ribonucleotide binding;6.35869897752264e-05!GO:0019001;guanyl nucleotide binding;6.35869897752264e-05!GO:0006612;protein targeting to membrane;6.36286605397694e-05!GO:0044440;endosomal part;7.15338467083548e-05!GO:0010008;endosome membrane;7.15338467083548e-05!GO:0008186;RNA-dependent ATPase activity;7.58289247877127e-05!GO:0009108;coenzyme biosynthetic process;7.59802157693795e-05!GO:0016363;nuclear matrix;7.76178844813237e-05!GO:0051187;cofactor catabolic process;7.99919184205575e-05!GO:0008234;cysteine-type peptidase activity;8.01396636761878e-05!GO:0046649;lymphocyte activation;8.12997607808608e-05!GO:0006355;regulation of transcription, DNA-dependent;8.12997607808608e-05!GO:0002376;immune system process;8.2991110386263e-05!GO:0009109;coenzyme catabolic process;8.2991110386263e-05!GO:0048522;positive regulation of cellular process;9.15743138109214e-05!GO:0060090;molecular adaptor activity;9.16499498034201e-05!GO:0003690;double-stranded DNA binding;9.43708821773039e-05!GO:0007005;mitochondrion organization and biogenesis;9.75570918666035e-05!GO:0009889;regulation of biosynthetic process;0.000105458285435002!GO:0043623;cellular protein complex assembly;0.000114922291886819!GO:0007264;small GTPase mediated signal transduction;0.000127645631279105!GO:0000278;mitotic cell cycle;0.000130043683804139!GO:0005813;centrosome;0.000156865307313532!GO:0004674;protein serine/threonine kinase activity;0.000176614406920489!GO:0005885;Arp2/3 protein complex;0.000186243064409543!GO:0003677;DNA binding;0.000193146499933897!GO:0003729;mRNA binding;0.000203864502548835!GO:0045321;leukocyte activation;0.00022353522773493!GO:0004004;ATP-dependent RNA helicase activity;0.000239987691279449!GO:0006752;group transfer coenzyme metabolic process;0.000252527858575485!GO:0005762;mitochondrial large ribosomal subunit;0.000258617873834059!GO:0000315;organellar large ribosomal subunit;0.000258617873834059!GO:0043492;ATPase activity, coupled to movement of substances;0.000275787829449362!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000304492906751537!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00032705556498067!GO:0000139;Golgi membrane;0.000337649278654924!GO:0008047;enzyme activator activity;0.000366516048670907!GO:0006891;intra-Golgi vesicle-mediated transport;0.00036820231540331!GO:0009117;nucleotide metabolic process;0.000421423449201034!GO:0003899;DNA-directed RNA polymerase activity;0.000426959617545918!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000428725807738013!GO:0051427;hormone receptor binding;0.000451444237556025!GO:0005798;Golgi-associated vesicle;0.000462768163410574!GO:0043021;ribonucleoprotein binding;0.000476306913483648!GO:0006310;DNA recombination;0.000478090673630247!GO:0008654;phospholipid biosynthetic process;0.000486498034790658!GO:0005774;vacuolar membrane;0.00051114841829942!GO:0005815;microtubule organizing center;0.000541703968961568!GO:0050790;regulation of catalytic activity;0.000559436680787008!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000639586254788109!GO:0030384;phosphoinositide metabolic process;0.000653375024720769!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000653638023982479!GO:0007265;Ras protein signal transduction;0.00066543390340532!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000692701646693339!GO:0031902;late endosome membrane;0.000799045134201858!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000868655083811068!GO:0035257;nuclear hormone receptor binding;0.000875104889438559!GO:0016251;general RNA polymerase II transcription factor activity;0.000910829958375852!GO:0048518;positive regulation of biological process;0.000979461796347339!GO:0005765;lysosomal membrane;0.00102117574061171!GO:0043681;protein import into mitochondrion;0.00104712269094819!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00107441232684947!GO:0031252;leading edge;0.0010827921057965!GO:0015992;proton transport;0.00113854228790419!GO:0006818;hydrogen transport;0.00119788273763775!GO:0030695;GTPase regulator activity;0.00120292409573655!GO:0000314;organellar small ribosomal subunit;0.00124424092487284!GO:0005763;mitochondrial small ribosomal subunit;0.00124424092487284!GO:0004518;nuclease activity;0.0012500458158519!GO:0016197;endosome transport;0.00125435231295593!GO:0031072;heat shock protein binding;0.00137411024279804!GO:0005667;transcription factor complex;0.00139722838679228!GO:0005070;SH3/SH2 adaptor activity;0.00140094977506021!GO:0044437;vacuolar part;0.00144477608362285!GO:0005769;early endosome;0.00149228397506738!GO:0006611;protein export from nucleus;0.00150455587757357!GO:0006352;transcription initiation;0.00161522238293939!GO:0032940;secretion by cell;0.00185251726488136!GO:0048500;signal recognition particle;0.00189813404654058!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00192238925794117!GO:0003714;transcription corepressor activity;0.00192497641143937!GO:0008033;tRNA processing;0.00193738232219792!GO:0006383;transcription from RNA polymerase III promoter;0.00195327480802905!GO:0003725;double-stranded RNA binding;0.00198947905182179!GO:0009966;regulation of signal transduction;0.00202346976638693!GO:0007034;vacuolar transport;0.00202881687314129!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00206012050631259!GO:0051252;regulation of RNA metabolic process;0.0021659981009458!GO:0022415;viral reproductive process;0.00220546656714177!GO:0046489;phosphoinositide biosynthetic process;0.00241867516431611!GO:0045892;negative regulation of transcription, DNA-dependent;0.00252899665502423!GO:0051087;chaperone binding;0.00254911561406475!GO:0016859;cis-trans isomerase activity;0.00257924241730832!GO:0006650;glycerophospholipid metabolic process;0.00259912271612724!GO:0047485;protein N-terminus binding;0.00260971371321854!GO:0002757;immune response-activating signal transduction;0.0026253719915646!GO:0006261;DNA-dependent DNA replication;0.00268448579157414!GO:0051251;positive regulation of lymphocyte activation;0.00269785877288749!GO:0051090;regulation of transcription factor activity;0.00270420688572039!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00279235363529228!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00279235363529228!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00279235363529228!GO:0043488;regulation of mRNA stability;0.00297375747465265!GO:0043487;regulation of RNA stability;0.00297375747465265!GO:0000786;nucleosome;0.00297929114534883!GO:0019867;outer membrane;0.00300191151523327!GO:0006955;immune response;0.00301246211899573!GO:0005741;mitochondrial outer membrane;0.00301246211899573!GO:0003746;translation elongation factor activity;0.00319226253532294!GO:0051336;regulation of hydrolase activity;0.00321356520835918!GO:0000087;M phase of mitotic cell cycle;0.00324061985717185!GO:0030658;transport vesicle membrane;0.003551978454162!GO:0031968;organelle outer membrane;0.0035584437878732!GO:0006414;translational elongation;0.0035584437878732!GO:0032259;methylation;0.00357642380521027!GO:0044452;nucleolar part;0.00363126784088815!GO:0005083;small GTPase regulator activity;0.00368215953829113!GO:0022890;inorganic cation transmembrane transporter activity;0.003693913991048!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00382814095735328!GO:0006405;RNA export from nucleus;0.0039166539830913!GO:0045045;secretory pathway;0.00397897881552349!GO:0005684;U2-dependent spliceosome;0.00398146515822032!GO:0006338;chromatin remodeling;0.00410181426935774!GO:0051092;activation of NF-kappaB transcription factor;0.0041383649820194!GO:0004527;exonuclease activity;0.00416377253076281!GO:0006607;NLS-bearing substrate import into nucleus;0.00418065859256409!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00418137734845809!GO:0045047;protein targeting to ER;0.00418137734845809!GO:0003711;transcription elongation regulator activity;0.0041902812334411!GO:0031982;vesicle;0.00462202193865975!GO:0008312;7S RNA binding;0.00475288348064767!GO:0043414;biopolymer methylation;0.00493087278836096!GO:0003678;DNA helicase activity;0.00493972281568464!GO:0005637;nuclear inner membrane;0.00496000094785497!GO:0030118;clathrin coat;0.00496000094785497!GO:0007067;mitosis;0.00497355907510107!GO:0002764;immune response-regulating signal transduction;0.00536308484187114!GO:0008624;induction of apoptosis by extracellular signals;0.00549272578145229!GO:0016584;nucleosome positioning;0.00555264894399152!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00558556856368577!GO:0006950;response to stress;0.00558821108030226!GO:0015631;tubulin binding;0.00570477657530791!GO:0019783;small conjugating protein-specific protease activity;0.00577148950356308!GO:0001775;cell activation;0.00589941088635907!GO:0005096;GTPase activator activity;0.00593738745033!GO:0048471;perinuclear region of cytoplasm;0.00599183231331395!GO:0004843;ubiquitin-specific protease activity;0.00602875032916607!GO:0051301;cell division;0.00621546131511758!GO:0046474;glycerophospholipid biosynthetic process;0.00621986908405558!GO:0046966;thyroid hormone receptor binding;0.00623930673824653!GO:0051539;4 iron, 4 sulfur cluster binding;0.00633804158342624!GO:0042287;MHC protein binding;0.00657507713179679!GO:0000049;tRNA binding;0.00663556048265951!GO:0016605;PML body;0.00664954994393249!GO:0006289;nucleotide-excision repair;0.00695055472886466!GO:0046822;regulation of nucleocytoplasmic transport;0.00727248050241277!GO:0042802;identical protein binding;0.00768589552599317!GO:0051098;regulation of binding;0.00782109942963832!GO:0007006;mitochondrial membrane organization and biogenesis;0.00791638563602618!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0079186292095432!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0079186292095432!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00802349002373324!GO:0008168;methyltransferase activity;0.00819036030254961!GO:0007050;cell cycle arrest;0.00829470967914148!GO:0031988;membrane-bound vesicle;0.00831878908195179!GO:0032200;telomere organization and biogenesis;0.00838695491173089!GO:0000723;telomere maintenance;0.00838695491173089!GO:0051249;regulation of lymphocyte activation;0.00851685435349784!GO:0006376;mRNA splice site selection;0.0086517665646851!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0086517665646851!GO:0005669;transcription factor TFIID complex;0.00871230040354042!GO:0050865;regulation of cell activation;0.00889838594402922!GO:0030660;Golgi-associated vesicle membrane;0.00889838594402922!GO:0000209;protein polyubiquitination;0.0089260457742749!GO:0022403;cell cycle phase;0.00904653430772251!GO:0001819;positive regulation of cytokine production;0.00926465236529277!GO:0050863;regulation of T cell activation;0.00926970769276651!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00928610212007747!GO:0033116;ER-Golgi intermediate compartment membrane;0.00979766769468419!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0100046053933992!GO:0016853;isomerase activity;0.0101608499378864!GO:0043087;regulation of GTPase activity;0.0102903391585987!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0103096589149814!GO:0051920;peroxiredoxin activity;0.0103096589149814!GO:0016741;transferase activity, transferring one-carbon groups;0.0109064723492862!GO:0004532;exoribonuclease activity;0.0113312331753847!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0113312331753847!GO:0051789;response to protein stimulus;0.0113556703759919!GO:0006986;response to unfolded protein;0.0113556703759919!GO:0004221;ubiquitin thiolesterase activity;0.0116052081185691!GO:0031625;ubiquitin protein ligase binding;0.011765685287901!GO:0048468;cell development;0.0117824692225365!GO:0004197;cysteine-type endopeptidase activity;0.0119003807310534!GO:0031410;cytoplasmic vesicle;0.0120448074095768!GO:0030518;steroid hormone receptor signaling pathway;0.0121581518624397!GO:0030663;COPI coated vesicle membrane;0.0121703897334901!GO:0030126;COPI vesicle coat;0.0121703897334901!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0121703897334901!GO:0015002;heme-copper terminal oxidase activity;0.0121703897334901!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0121703897334901!GO:0004129;cytochrome-c oxidase activity;0.0121703897334901!GO:0022411;cellular component disassembly;0.0126977578261569!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0129687010865418!GO:0051540;metal cluster binding;0.0134397276253377!GO:0051536;iron-sulfur cluster binding;0.0134397276253377!GO:0008097;5S rRNA binding;0.0136516094540548!GO:0048487;beta-tubulin binding;0.013682666246224!GO:0008017;microtubule binding;0.0138535264260281!GO:0040029;regulation of gene expression, epigenetic;0.0140405808724527!GO:0008408;3'-5' exonuclease activity;0.0141642423272848!GO:0009165;nucleotide biosynthetic process;0.0141936709699002!GO:0006626;protein targeting to mitochondrion;0.0144053063463589!GO:0030137;COPI-coated vesicle;0.0149798313229185!GO:0018193;peptidyl-amino acid modification;0.0149933902715986!GO:0007041;lysosomal transport;0.0155985357881918!GO:0015630;microtubule cytoskeleton;0.0156417013441057!GO:0050870;positive regulation of T cell activation;0.0156591225126104!GO:0006497;protein amino acid lipidation;0.0157179868711157!GO:0045454;cell redox homeostasis;0.0157866036663792!GO:0005869;dynactin complex;0.0160880560463217!GO:0016023;cytoplasmic membrane-bound vesicle;0.0169242250531221!GO:0016301;kinase activity;0.0169936710358198!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0171228699369735!GO:0009112;nucleobase metabolic process;0.0171988383550662!GO:0000059;protein import into nucleus, docking;0.0178712658581579!GO:0015980;energy derivation by oxidation of organic compounds;0.018425929304445!GO:0016585;chromatin remodeling complex;0.0185426978465628!GO:0003682;chromatin binding;0.0186389227038641!GO:0016272;prefoldin complex;0.0187034999360769!GO:0000781;chromosome, telomeric region;0.0187802048305268!GO:0019079;viral genome replication;0.019496441309802!GO:0005657;replication fork;0.0195881264593992!GO:0005048;signal sequence binding;0.0202881432583853!GO:0009116;nucleoside metabolic process;0.0204162683519522!GO:0015923;mannosidase activity;0.0204872485239929!GO:0006839;mitochondrial transport;0.0207042190357416!GO:0050811;GABA receptor binding;0.0216980006407093!GO:0022406;membrane docking;0.0219026418302044!GO:0048278;vesicle docking;0.0219026418302044!GO:0030880;RNA polymerase complex;0.0219026418302044!GO:0006302;double-strand break repair;0.0219026418302044!GO:0050852;T cell receptor signaling pathway;0.0219175905783168!GO:0030521;androgen receptor signaling pathway;0.0220046701496709!GO:0030125;clathrin vesicle coat;0.0220103921089817!GO:0030665;clathrin coated vesicle membrane;0.0220103921089817!GO:0048002;antigen processing and presentation of peptide antigen;0.022333370721405!GO:0000118;histone deacetylase complex;0.0223477345449116!GO:0005521;lamin binding;0.0228934436610815!GO:0006506;GPI anchor biosynthetic process;0.0235808828815346!GO:0046467;membrane lipid biosynthetic process;0.0237133245954523!GO:0045058;T cell selection;0.0238244516928417!GO:0019058;viral infectious cycle;0.0242779769879449!GO:0001784;phosphotyrosine binding;0.024432228809553!GO:0019843;rRNA binding;0.0244880581589258!GO:0051223;regulation of protein transport;0.0246489278776109!GO:0016044;membrane organization and biogenesis;0.0246778870003375!GO:0050851;antigen receptor-mediated signaling pathway;0.0246957623056893!GO:0031124;mRNA 3'-end processing;0.0253001225649629!GO:0044438;microbody part;0.025440896050199!GO:0044439;peroxisomal part;0.025440896050199!GO:0016505;apoptotic protease activator activity;0.0256460756425707!GO:0006904;vesicle docking during exocytosis;0.0257643862459121!GO:0042393;histone binding;0.0259993270577479!GO:0003684;damaged DNA binding;0.0262979470647215!GO:0009607;response to biotic stimulus;0.0263898329106982!GO:0030867;rough endoplasmic reticulum membrane;0.026394712380018!GO:0043022;ribosome binding;0.0270178994850079!GO:0030119;AP-type membrane coat adaptor complex;0.0270178994850079!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0270235907179438!GO:0043621;protein self-association;0.0270235907179438!GO:0001726;ruffle;0.0272868631879414!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0273004414489967!GO:0051091;positive regulation of transcription factor activity;0.0282255293258102!GO:0008180;signalosome;0.028348806538106!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0285313981606589!GO:0006505;GPI anchor metabolic process;0.0288174614560026!GO:0030258;lipid modification;0.0288174614560026!GO:0000738;DNA catabolic process, exonucleolytic;0.0294896858902452!GO:0045309;protein phosphorylated amino acid binding;0.0296961857590256!GO:0000178;exosome (RNase complex);0.0297359812214722!GO:0030132;clathrin coat of coated pit;0.0298954839644815!GO:0019904;protein domain specific binding;0.0300141554680106!GO:0006919;caspase activation;0.0300176505604567!GO:0008139;nuclear localization sequence binding;0.0302631972884653!GO:0019883;antigen processing and presentation of endogenous antigen;0.0304508982789602!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0307192068612558!GO:0004003;ATP-dependent DNA helicase activity;0.0312833632589166!GO:0046979;TAP2 binding;0.031726499925374!GO:0046977;TAP binding;0.031726499925374!GO:0046978;TAP1 binding;0.031726499925374!GO:0042608;T cell receptor binding;0.0320980268038362!GO:0004722;protein serine/threonine phosphatase activity;0.0321018538849099!GO:0016790;thiolester hydrolase activity;0.0323016312967541!GO:0000287;magnesium ion binding;0.0323016312967541!GO:0007004;telomere maintenance via telomerase;0.0323016312967541!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0323016312967541!GO:0031123;RNA 3'-end processing;0.0324619402087836!GO:0000119;mediator complex;0.0328331922880696!GO:0051219;phosphoprotein binding;0.0330530021717151!GO:0005832;chaperonin-containing T-complex;0.0330530021717151!GO:0043281;regulation of caspase activity;0.0330601784048327!GO:0030131;clathrin adaptor complex;0.0334125625155945!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0337983525426633!GO:0000303;response to superoxide;0.0340859315046874!GO:0004540;ribonuclease activity;0.0345922250829031!GO:0004576;oligosaccharyl transferase activity;0.0346271867976662!GO:0030522;intracellular receptor-mediated signaling pathway;0.0367221308889824!GO:0032318;regulation of Ras GTPase activity;0.0374267850537073!GO:0031903;microbody membrane;0.0377633961773999!GO:0005778;peroxisomal membrane;0.0377633961773999!GO:0008250;oligosaccharyl transferase complex;0.0378264427947981!GO:0005095;GTPase inhibitor activity;0.0387129663078937!GO:0000090;mitotic anaphase;0.0389430065177035!GO:0051322;anaphase;0.0389430065177035!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.0390474794297941!GO:0008287;protein serine/threonine phosphatase complex;0.0390973549848917!GO:0017134;fibroblast growth factor binding;0.0391663987578611!GO:0005057;receptor signaling protein activity;0.0394183915976901!GO:0007259;JAK-STAT cascade;0.0394183915976901!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0398195542771514!GO:0000428;DNA-directed RNA polymerase complex;0.0398195542771514!GO:0000776;kinetochore;0.0401444921860147!GO:0002378;immunoglobulin biosynthetic process;0.0401444921860147!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0401444921860147!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0401444921860147!GO:0030176;integral to endoplasmic reticulum membrane;0.040980276776187!GO:0006595;polyamine metabolic process;0.0413092316022183!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0413092316022183!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0413092316022183!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0427274240662863!GO:0032984;macromolecular complex disassembly;0.0430802048397703!GO:0006213;pyrimidine nucleoside metabolic process;0.0430802048397703!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0432790074608721!GO:0042158;lipoprotein biosynthetic process;0.043355275858445!GO:0006284;base-excision repair;0.0444603466262868!GO:0030127;COPII vesicle coat;0.0453614946839853!GO:0012507;ER to Golgi transport vesicle membrane;0.0453614946839853!GO:0005784;translocon complex;0.0457743702447498!GO:0016788;hydrolase activity, acting on ester bonds;0.0461669862120938!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0466442690473757!GO:0006378;mRNA polyadenylation;0.047283496257466!GO:0002440;production of molecular mediator of immune response;0.0474586855739!GO:0008094;DNA-dependent ATPase activity;0.0477602396555263!GO:0006406;mRNA export from nucleus;0.0479209015898069!GO:0030134;ER to Golgi transport vesicle;0.0489655114237172!GO:0008637;apoptotic mitochondrial changes;0.048966789257719!GO:0032981;mitochondrial respiratory chain complex I assembly;0.048966789257719!GO:0010257;NADH dehydrogenase complex assembly;0.048966789257719!GO:0033108;mitochondrial respiratory chain complex assembly;0.048966789257719!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0489968673860077!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0489968673860077!GO:0008538;proteasome activator activity;0.049130356315596
 +
|sample_id=12206
 +
|sample_note=
 +
|sample_sex=
 +
|sample_species=Human (Homo sapiens)
 +
|sample_strain=
 +
|sample_tissue=blood
 +
|top_motifs=ELF1,2,4:2.55826061884;RUNX1..3:2.26464567158;ETS1,2:2.10270691616;CDX1,2,4:1.94502362637;T:1.90361827871;PAX3,7:1.87816910354;PDX1:1.87761538408;STAT1,3:1.77530684783;SPI1:1.75157093405;FOX{D1,D2}:1.56795480577;DMAP1_NCOR{1,2}_SMARC:1.51983332109;CRX:1.4899823675;IRF1,2:1.47702201281;RORA:1.43350591514;FOXO1,3,4:1.40476907334;SPIB:1.36263784748;TLX2:1.347131566;FOX{F1,F2,J1}:1.22241804004;ELK1,4_GABP{A,B1}:1.16182108422;BPTF:1.08089551585;IKZF2:1.06091179035;NANOG{mouse}:1.03950238621;HMX1:1.03716589971;IRF7:0.985349758836;TGIF1:0.932837210364;GATA6:0.861120791253;YY1:0.857341078999;NKX2-2,8:0.85678978669;FOXA2:0.822690642711;LEF1_TCF7_TCF7L1,2:0.791991946722;PBX1:0.77387482341;MYOD1:0.715271501233;NKX6-1,2:0.677743818845;BREu{core}:0.604765434258;FOX{I1,J2}:0.602479864412;PAX6:0.587289308784;EP300:0.561830375372;CREB1:0.508823303222;ZBTB16:0.461556521934;ZEB1:0.377064338737;CUX2:0.376603344572;FOXP3:0.376459485703;SPZ1:0.373393468602;RFX2..5_RFXANK_RFXAP:0.340536906643;PAX4:0.331260567313;ATF5_CREB3:0.32415977578;FOXN1:0.321163913731;SOX5:0.319900257813;SNAI1..3:0.287912415017;ALX1:0.279858090325;FOXD3:0.271951029831;POU1F1:0.263261029273;NFIX:0.260229832728;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.227766779336;FOXP1:0.216209634371;NRF1:0.215763896448;NFATC1..3:0.197535882804;PAX2:0.1934579055;SREBF1,2:0.179934816343;NKX2-1,4:0.163772752377;NFKB1_REL_RELA:0.161321294342;STAT5{A,B}:0.145491712212;RBPJ:0.142048121505;STAT2,4,6:0.0889218372336;POU2F1..3:0.0741276468769;NFIL3:0.0700990975287;ZNF143:0.0620802553001;NR1H4:0.0538828094238;ZNF148:0.0511615013658;SOX2:0.048504584935;ATF2:0.048091175455;LMO2:0.0235378398979;TAL1_TCF{3,4,12}:-0.0134149591876;HOX{A6,A7,B6,B7}:-0.0144979086812;AR:-0.026899952346;VSX1,2:-0.0279952907792;MYB:-0.0447288502894;HES1:-0.0591304348062;OCT4_SOX2{dimer}:-0.068625542096;PRRX1,2:-0.0752701071837;ADNP_IRX_SIX_ZHX:-0.0775372672133;CEBPA,B_DDIT3:-0.080387334501;NKX3-1:-0.0978398526816;TBX4,5:-0.115044341239;POU5F1:-0.141184718535;NR5A1,2:-0.144873686284;TFAP4:-0.175521893935;RXRA_VDR{dimer}:-0.185563724498;HLF:-0.205756859576;FOXQ1:-0.216086434907;FOXM1:-0.225617366133;MYFfamily:-0.256284314674;DBP:-0.267424589696;GCM1,2:-0.279128713338;NANOG:-0.288376783142;NFY{A,B,C}:-0.291560399361;HMGA1,2:-0.293912807178;JUN:-0.299779315437;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.300317199331;ESR1:-0.303519136229;AHR_ARNT_ARNT2:-0.314017972137;TFCP2:-0.314558993295;HAND1,2:-0.329702657799;NFE2L1:-0.329891097296;RREB1:-0.331445697444;ARID5B:-0.333604145007;HNF4A_NR2F1,2:-0.341602943696;GLI1..3:-0.342742780006;HNF1A:-0.357465197427;HBP1_HMGB_SSRP1_UBTF:-0.360951276991;E2F1..5:-0.369602893528;NFE2L2:-0.370771901515;FOSL2:-0.374883096795;ZNF423:-0.378302931628;MTF1:-0.378560959914;AIRE:-0.384093889024;MZF1:-0.411017838872;MAFB:-0.4131555707;ALX4:-0.454792677045;NR3C1:-0.456391056151;ATF4:-0.483115398937;BACH2:-0.49325533529;EVI1:-0.555404804965;RFX1:-0.56247810974;NHLH1,2:-0.568703852065;GFI1:-0.568908600611;FOS_FOS{B,L1}_JUN{B,D}:-0.570343986341;HIF1A:-0.580830212625;GATA4:-0.60791932758;ZNF238:-0.616715619728;ATF6:-0.62850807687;ZNF384:-0.631065369965;NFE2:-0.638649872159;EGR1..3:-0.639548505565;REST:-0.650870277546;PPARG:-0.684798286146;PITX1..3:-0.689268932533;SMAD1..7,9:-0.692312001192;SRF:-0.7030331634;ZFP161:-0.728025239417;NKX2-3_NKX2-5:-0.758970840136;MAZ:-0.784039329168;PAX5:-0.798751774375;PRDM1:-0.809827077334;PATZ1:-0.816681873104;MEF2{A,B,C,D}:-0.82927171212;NR6A1:-0.870680654736;MTE{core}:-0.909464268014;MED-1{core}:-0.92416420281;TP53:-0.924246395831;TOPORS:-0.925058024104;ZBTB6:-0.945941016768;LHX3,4:-0.956925452689;KLF4:-0.97522764519;ONECUT1,2:-0.989001120972;GFI1B:-1.02676648181;HOX{A4,D4}:-1.06583372498;HOXA9_MEIS1:-1.09443544881;SOX{8,9,10}:-1.09626317751;bHLH_family:-1.09815136043;HSF1,2:-1.10114853017;GTF2I:-1.1051520855;NKX3-2:-1.12129193222;XCPE1{core}:-1.12609161097;MYBL2:-1.13510884193;GZF1:-1.14076605003;EN1,2:-1.14858968372;PAX8:-1.20013322302;CDC5L:-1.28656829148;UFEwm:-1.29731383455;TFAP2B:-1.29747114296;RXR{A,B,G}:-1.31543376898;XBP1:-1.31923682028;TEF:-1.32153523746;SP1:-1.3307239453;SOX17:-1.37103924305;HIC1:-1.37705496067;TLX1..3_NFIC{dimer}:-1.39330765311;EBF1:-1.42645980608;TBP:-1.43648850792;GTF2A1,2:-1.488345612;TFDP1:-1.51769587458;POU6F1:-1.51874835923;HOX{A5,B5}:-1.55949696024;FOXL1:-1.5605468553;TFAP2{A,C}:-1.61417841238;ZIC1..3:-1.6510933289;ESRRA:-1.6852737764;TEAD1:-1.73562000057;POU3F1..4:-1.83507449209;IKZF1:-2.2867958352;PAX1,9:-2.29433812416
 +
|xref=
 +
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12206-129D1;search_select_hide=table117:FF:12206-129D1
 
}}
 
}}

Latest revision as of 09:34, 4 June 2020

Name:CD8+ T Cells (pluriselect), donor090612, donation2
Species:Human (Homo sapiens)
Library ID:CNhs12184,RDhi10018
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typeT cell, CD8+
cell lineNA
companyNA
collaborationMatched_genome_OSC(contact:Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
RNA-Seq  SAMD00013694
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12184 CAGE DRX008070 DRR008942
RDhi10018 RNA-Seq DRX012351 DRR013799
Accession ID Hg19

Library idBAMCTSS
CNhs12184 DRZ000367 DRZ001752
RDhi10018 DRZ003000
Accession ID Hg38

Library idBAMCTSS
CNhs12184 DRZ011717 DRZ013102
RDhi10018
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.168
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis--0.165
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma--0.224
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.00584
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0655
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.39
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.345
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.84
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle--0.525
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.0923
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed--0.236
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.0923
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte--0.375
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.0923
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.462
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus--0.0427
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.61
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.138
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.139
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.289
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.162
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.527
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.117
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small--0.547
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.168
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.304
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.116
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.339
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.362
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.958
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.0923
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.84
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in this sample. Pearson's correlation between the number of TFBSs estimated by using the position-weight matrix for each promoter and its expression is expressed as Z-score by taking the ones based on random position-weight matrix, and the tail probability of the normal distribution corresponding to the Z-score is taken as the resulting P-value. Lower P-value indicates more (non-random) association of the motif to promoter expression
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs12184

Jaspar motif P-value
MA0002.2 2.89832e-10
MA0003.1 0.482
MA0004.1 0.944
MA0006.1 0.508
MA0007.1 0.954
MA0009.1 0.202
MA0014.1 0.98
MA0017.1 0.0292
MA0018.2 0.431
MA0019.1 0.992
MA0024.1 0.219
MA0025.1 0.71
MA0027.1 0.929
MA0028.1 1.18661e-4
MA0029.1 0.697
MA0030.1 0.138
MA0031.1 0.00834
MA0035.2 0.212
MA0038.1 0.0976
MA0039.2 0.898
MA0040.1 0.884
MA0041.1 0.861
MA0042.1 0.559
MA0043.1 0.325
MA0046.1 0.795
MA0047.2 0.175
MA0048.1 0.28
MA0050.1 4.61348e-9
MA0051.1 6.31316e-5
MA0052.1 0.00109
MA0055.1 0.394
MA0057.1 0.685
MA0058.1 0.81
MA0059.1 0.547
MA0060.1 0.0437
MA0061.1 0.00469
MA0062.2 4.28177e-18
MA0065.2 0.0386
MA0066.1 0.157
MA0067.1 0.643
MA0068.1 0.424
MA0069.1 0.747
MA0070.1 0.411
MA0071.1 0.696
MA0072.1 0.439
MA0073.1 0.797
MA0074.1 0.642
MA0076.1 1.18089e-7
MA0077.1 0.0862
MA0078.1 0.751
MA0079.2 0.563
MA0080.2 2.80608e-15
MA0081.1 0.00427
MA0083.1 0.0353
MA0084.1 0.449
MA0087.1 0.652
MA0088.1 0.0603
MA0090.1 2.86221e-4
MA0091.1 0.844
MA0092.1 0.921
MA0093.1 0.975
MA0099.2 0.0394
MA0100.1 0.512
MA0101.1 0.675
MA0102.2 0.286
MA0103.1 0.148
MA0104.2 0.277
MA0105.1 1.08006e-5
MA0106.1 0.355
MA0107.1 0.844
MA0108.2 1.57164e-10
MA0111.1 0.207
MA0112.2 0.0863
MA0113.1 0.706
MA0114.1 0.271
MA0115.1 0.774
MA0116.1 1.02917e-5
MA0117.1 0.725
MA0119.1 0.715
MA0122.1 0.23
MA0124.1 0.491
MA0125.1 0.308
MA0131.1 0.603
MA0135.1 0.829
MA0136.1 1.19946e-27
MA0137.2 0.0105
MA0138.2 0.995
MA0139.1 0.0103
MA0140.1 0.213
MA0141.1 0.984
MA0142.1 0.568
MA0143.1 0.377
MA0144.1 0.0949
MA0145.1 0.943
MA0146.1 0.3
MA0147.1 0.31
MA0148.1 0.404
MA0149.1 0.234
MA0150.1 0.653
MA0152.1 0.037
MA0153.1 0.261
MA0154.1 0.00443
MA0155.1 0.769
MA0156.1 1.58714e-27
MA0157.1 0.00938
MA0159.1 0.0574
MA0160.1 0.401
MA0162.1 0.906
MA0163.1 3.775e-10
MA0164.1 0.39
MA0258.1 0.121
MA0259.1 0.689



FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in 169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs12184

Novel motif P-value
1 0.189
10 0.0185
100 0.792
101 0.277
102 0.525
103 0.151
104 0.533
105 0.0874
106 0.511
107 0.243
108 0.645
109 0.0616
11 0.0778
110 0.44
111 0.358
112 0.449
113 0.143
114 0.206
115 0.307
116 0.929
117 0.00656
118 0.307
119 0.71
12 0.654
120 0.494
121 0.913
122 0.432
123 0.041
124 0.0963
125 0.699
126 0.262
127 0.294
128 0.635
129 0.359
13 0.65
130 0.751
131 0.784
132 0.838
133 0.753
134 0.753
135 0.249
136 0.934
137 0.0445
138 0.204
139 0.0171
14 0.256
140 0.0921
141 0.636
142 0.557
143 1.37755e-5
144 0.744
145 0.383
146 0.226
147 0.0179
148 0.114
149 0.883
15 0.0825
150 0.74
151 0.28
152 0.54
153 0.8
154 0.949
155 0.0239
156 0.479
157 0.352
158 0.283
159 0.0878
16 0.728
160 0.581
161 0.298
162 0.282
163 0.816
164 0.417
165 0.252
166 0.663
167 0.55
168 0.0991
169 0.445
17 0.742
18 0.603
19 0.656
2 0.538
20 0.738
21 0.309
22 0.781
23 0.947
24 0.407
25 0.0544
26 0.56
27 0.0397
28 0.395
29 0.125
3 0.0294
30 0.586
31 0.648
32 0.133
33 0.483
34 0.659
35 0.0722
36 0.0514
37 0.21
38 0.549
39 0.562
4 0.797
40 0.539
41 0.15
42 0.0515
43 0.226
44 0.535
45 0.958
46 0.125
47 0.0822
48 0.128
49 0.142
5 0.186
50 0.614
51 0.512
52 0.467
53 0.143
54 0.447
55 0.22
56 0.494
57 0.625
58 0.0327
59 0.259
6 0.96
60 0.245
61 0.131
62 0.0165
63 0.649
64 0.192
65 0.613
66 0.99
67 0.928
68 0.518
69 0.92
7 0.194
70 0.0172
71 0.106
72 0.0747
73 0.605
74 0.334
75 0.0356
76 0.295
77 0.698
78 0.161
79 0.408
8 0.878
80 0.00167
81 0.309
82 0.0942
83 0.984
84 0.395
85 0.733
86 0.156
87 0.607
88 0.775
89 0.876
9 0.358
90 0.0107
91 0.895
92 0.29
93 0.223
94 0.0625
95 0.0229
96 0.128
97 0.442
98 0.236
99 0.138



de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown.
Analyst:NA
library id: CNhs12184


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship
Analyst: Hideya Kawaji

link to source data
data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship
Analyst: Hideya Kawaji

link to source data
data

CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)