FF:11351-117H1: Difference between revisions

Revision as of 20:44, 9 July 2012

Name:	Melanocyte - light, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skin
dev stage	infant
sex	male
age	Neonatal
cell type	melanocyte
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1607
catalog number	CA104-R10n
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0844
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.0376
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.26
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.204
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.887
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.699
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.677
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0663
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.352
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0.655
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	1.084
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11383

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.217
MA0003.1	MA0003.1	0.245
MA0004.1	MA0004.1	1.77055e-5
MA0006.1	MA0006.1	0.681
MA0007.1	MA0007.1	0.0558
MA0009.1	MA0009.1	0.505
MA0014.1	MA0014.1	0.279
MA0017.1	MA0017.1	0.628
MA0018.2	MA0018.2	0.914
MA0019.1	MA0019.1	0.141
MA0024.1	MA0024.1	0.456
MA0025.1	MA0025.1	0.408
MA0027.1	MA0027.1	0.41
MA0028.1	MA0028.1	0.756
MA0029.1	MA0029.1	0.802
MA0030.1	MA0030.1	0.778
MA0031.1	MA0031.1	0.81
MA0035.2	MA0035.2	0.0194
MA0038.1	MA0038.1	0.0156
MA0039.2	MA0039.2	0.0236
MA0040.1	MA0040.1	0.521
MA0041.1	MA0041.1	0.306
MA0042.1	MA0042.1	0.813
MA0043.1	MA0043.1	0.0366
MA0046.1	MA0046.1	0.516
MA0047.2	MA0047.2	0.919
MA0048.1	MA0048.1	0.949
MA0050.1	MA0050.1	0.668
MA0051.1	MA0051.1	0.679
MA0052.1	MA0052.1	0.0198
MA0055.1	MA0055.1	0.00611
MA0057.1	MA0057.1	0.385
MA0058.1	MA0058.1	2.14797e-10
MA0059.1	MA0059.1	2.30341e-4
MA0060.1	MA0060.1	4.96006e-8
MA0061.1	MA0061.1	0.0321
MA0062.2	MA0062.2	0.38
MA0065.2	MA0065.2	0.0589
MA0066.1	MA0066.1	0.385
MA0067.1	MA0067.1	0.00223
MA0068.1	MA0068.1	0.312
MA0069.1	MA0069.1	0.178
MA0070.1	MA0070.1	2.20598e-5
MA0071.1	MA0071.1	0.442
MA0072.1	MA0072.1	0.942
MA0073.1	MA0073.1	0.929
MA0074.1	MA0074.1	0.0326
MA0076.1	MA0076.1	0.46
MA0077.1	MA0077.1	0.17
MA0078.1	MA0078.1	0.993
MA0079.2	MA0079.2	0.179
MA0080.2	MA0080.2	0.0228
MA0081.1	MA0081.1	0.539
MA0083.1	MA0083.1	0.346
MA0084.1	MA0084.1	0.429
MA0087.1	MA0087.1	0.611
MA0088.1	MA0088.1	0.134
MA0090.1	MA0090.1	0.532
MA0091.1	MA0091.1	0.274
MA0092.1	MA0092.1	0.677
MA0093.1	MA0093.1	7.09823e-6
MA0099.2	MA0099.2	0.54
MA0100.1	MA0100.1	0.628
MA0101.1	MA0101.1	0.182
MA0102.2	MA0102.2	0.0191
MA0103.1	MA0103.1	0.721
MA0104.2	MA0104.2	0.0104
MA0105.1	MA0105.1	0.129
MA0106.1	MA0106.1	0.886
MA0107.1	MA0107.1	0.0531
MA0108.2	MA0108.2	0.472
MA0111.1	MA0111.1	0.369
MA0112.2	MA0112.2	0.621
MA0113.1	MA0113.1	0.746
MA0114.1	MA0114.1	0.0751
MA0115.1	MA0115.1	0.632
MA0116.1	MA0116.1	0.554
MA0117.1	MA0117.1	0.0737
MA0119.1	MA0119.1	0.698
MA0122.1	MA0122.1	0.859
MA0124.1	MA0124.1	0.374
MA0125.1	MA0125.1	0.0202
MA0131.1	MA0131.1	0.324
MA0135.1	MA0135.1	0.0313
MA0136.1	MA0136.1	0.0463
MA0137.2	MA0137.2	0.285
MA0138.2	MA0138.2	0.978
MA0139.1	MA0139.1	0.407
MA0140.1	MA0140.1	0.1
MA0141.1	MA0141.1	0.0107
MA0142.1	MA0142.1	0.168
MA0143.1	MA0143.1	0.648
MA0144.1	MA0144.1	0.159
MA0145.1	MA0145.1	0.266
MA0146.1	MA0146.1	0.0031
MA0147.1	MA0147.1	0.0199
MA0148.1	MA0148.1	0.921
MA0149.1	MA0149.1	0.0852
MA0150.1	MA0150.1	0.978
MA0152.1	MA0152.1	0.0889
MA0153.1	MA0153.1	0.186
MA0154.1	MA0154.1	0.456
MA0155.1	MA0155.1	0.307
MA0156.1	MA0156.1	0.152
MA0157.1	MA0157.1	0.858
MA0159.1	MA0159.1	0.114
MA0160.1	MA0160.1	0.00964
MA0162.1	MA0162.1	0.206
MA0163.1	MA0163.1	0.686
MA0164.1	MA0164.1	0.613
MA0258.1	MA0258.1	0.186
MA0259.1	MA0259.1	0.174

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11383

Novel motif	Logo	P-value
1	1	0.864
10	10	0.538
100	100	0.533
101	101	0.0478
102	102	0.0388
103	103	0.0531
104	104	0.283
105	105	0.976
106	106	0.926
107	107	0.666
108	108	0.866
109	109	0.022
11	11	0.682
110	110	0.0379
111	111	0.0649
112	112	0.73
113	113	0.0188
114	114	0.571
115	115	0.749
116	116	0.89
117	117	0.271
118	118	0.873
119	119	0.695
12	12	0.66
120	120	0.955
121	121	0.295
122	122	0.163
123	123	0.956
124	124	0.895
125	125	0.484
126	126	0.794
127	127	0.645
128	128	0.429
129	129	0.0298
13	13	0.367
130	130	0.416
131	131	0.522
132	132	0.412
133	133	0.351
134	134	0.71
135	135	0.268
136	136	0.101
137	137	0.714
138	138	0.91
139	139	0.176
14	14	0.935
140	140	0.39
141	141	0.095
142	142	0.975
143	143	0.409
144	144	0.764
145	145	0.672
146	146	3.41269e-4
147	147	0.6
148	148	0.0113
149	149	0.695
15	15	0.782
150	150	0.734
151	151	0.861
152	152	0.283
153	153	0.069
154	154	0.0166
155	155	0.654
156	156	0.921
157	157	0.867
158	158	0.567
159	159	0.843
16	16	0.377
160	160	0.701
161	161	0.641
162	162	0.048
163	163	0.726
164	164	0.255
165	165	0.18
166	166	0.486
167	167	0.17
168	168	0.215
169	169	0.21
17	17	0.419
18	18	0.158
19	19	0.311
2	2	0.933
20	20	0.824
21	21	0.414
22	22	0.011
23	23	0.668
24	24	0.949
25	25	0.358
26	26	0.49
27	27	0.23
28	28	0.273
29	29	0.0543
3	3	0.886
30	30	0.641
31	31	0.673
32	32	0.0868
33	33	0.304
34	34	0.236
35	35	0.438
36	36	0.884
37	37	0.66
38	38	0.312
39	39	0.799
4	4	0.601
40	40	0.0144
41	41	0.927
42	42	0.264
43	43	0.463
44	44	0.979
45	45	0.7
46	46	0.345
47	47	0.675
48	48	0.902
49	49	0.581
5	5	0.6
50	50	0.364
51	51	0.913
52	52	0.797
53	53	0.112
54	54	0.626
55	55	0.447
56	56	0.587
57	57	0.45
58	58	0.128
59	59	0.268
6	6	0.933
60	60	0.823
61	61	0.677
62	62	0.0293
63	63	0.51
64	64	0.363
65	65	0.0683
66	66	0.00564
67	67	0.664
68	68	0.151
69	69	0.709
7	7	0.946
70	70	0.822
71	71	0.729
72	72	0.949
73	73	0.00748
74	74	0.189
75	75	0.528
76	76	0.887
77	77	0.412
78	78	0.21
79	79	0.647
8	8	0.3
80	80	0.76
81	81	0.856
82	82	0.998
83	83	0.277
84	84	0.151
85	85	0.351
86	86	0.782
87	87	6.4636e-4
88	88	0.267
89	89	0.506
9	9	0.324
90	90	0.0226
91	91	0.612
92	92	0.0136
93	93	0.316
94	94	0.751
95	95	0.0526
96	96	0.903
97	97	0.196
98	98	0.127
99	99	0.266

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11383

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000090 human light melanocyte sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000147 (pigment cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000148 (melanocyte)
0002567 (light melanocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000090 (human light melanocyte sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr22:38380543..38380569,-!p1@SOX10!3.01!1026.82!SOX10;;chr3:69985734..69985749,+!p2@MITF!2.34!219.20!MITF;;chr6:391743..391759,+!p1@IRF4!2.31!202.79!IRF4;;chr6:10415276..10415341,-!p2@TFAP2A!2.30!240.30!TFAP2A;;chr19:3574330..3574393,+!p2@HMG20B!2.29!192.24!HMG20B;;chr2:223163706..223163730,-!p1@PAX3!2.19!153.55!PAX3;;chr6:10412600..10412637,-!p1@TFAP2A!2.06!182.86!TFAP2A;;chr19:3574157..3574180,+!p4@HMG20B!1.92!82.05!HMG20B;;chr15:42749722..42749739,-!p2@ZFP106!1.85!121.91!ZFP106;;chr19:3574400..3574430,+!p6@HMG20B!1.81!63.30!HMG20B;;chr6:10415484..10415508,-!p3@TFAP2A!1.80!62.13!TFAP2A;;chr17:59477233..59477263,+!p1@TBX2!1.64!128.94!TBX2;;chr8:72756637..72756664,-!p3@MSC!1.60!43.37!MSC;;chr2:239148671..239148686,-!p1@HES6!1.59!134.80!HES6;;chr17:59477275..59477286,+!p3@TBX2!1.59!50.40!TBX2;;chr12:26277817..26277863,-!p2@BHLHE41!1.56!46.89!BHLHE41;;chr6:10412392..10412409,-!p4@TFAP2A!1.50!35.17!TFAP2A;;chr1:25256756..25256774,-!p1@RUNX3!1.46!51.58!RUNX3;;chr6:10415263..10415274,-!p8@TFAP2A!1.39!23.44!TFAP2A;;chr6:10412576..10412599,-!p5@TFAP2A!1.37!22.27!TFAP2A;;chr11:125034640..125034655,+!p1@PKNOX2!1.32!19.93!PKNOX2;;chr8:72756267..72756296,-!p4@MSC!1.31!28.13!MSC;;chr19:3574468..3574478,+!p19@HMG20B!1.27!17.58!HMG20B;;chr20:55204351..55204377,+!p1@TFAP2C!1.25!21.10!TFAP2C;;chr17:46806067..46806097,-!p1@HOXB13!1.24!16.41!HOXB13;;chr11:125034605..125034636,+!p2@PKNOX2!1.21!15.24!PKNOX2;;chr20:50179368..50179392,-!p2@NFATC2!1.19!18.75!NFATC2;;chr9:102584262..102584276,+!p1@NR4A3!1.15!29.30!NR4A3;;chr3:185826855..185826911,-!p1@ETV5!1.14!348.14!ETV5;;chr16:67198683..67198698,+!p2@HSF4!1.14!12.89!HSF4;;chr17:46806035..46806059,-!p2@HOXB13!1.14!12.89!HOXB13;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.14!12.89!HOXC5;;chr12:26277956..26277980,-!p1@BHLHE41!1.10!42.20!BHLHE41;;chr17:59477197..59477212,+!p2@TBX2!1.10!19.93!TBX2;;chr2:177053386..177053402,+!p1@HOXD1!1.10!11.72!HOXD1;;chr1:63788229..63788250,+!p1@FOXD3!1.10!11.72!FOXD3;;chr5:321810..321877,+!p1@AHRR!1.09!36.34!AHRR;;chr6:10412477..10412490,-!p10@TFAP2A!1.06!10.55!TFAP2A;;chr19:3576938..3576962,+!p9@HMG20B!1.06!10.55!HMG20B;;chr22:41721853..41721874,+!p6@ZC3H7B!1.06!10.55!ZC3H7B;;chr8:128748308..128748324,+!p2@MYC!1.03!275.46!MYC;;chr8:72756667..72756736,-!p2@MSC!1.03!15.24!MSC;;chr12:54447599..54447630,+!p3@HOXC4!1.02!11.72!HOXC4;;chr2:145271342..145271377,-!p5@ZEB2!1.02!9.38!ZEB2;;chr16:67198633..67198671,+!p1@HSF4!1.02!9.38!HSF4;;chr17:59477266..59477273,+!p6@TBX2!1.02!9.38!TBX2;;chr19:3572689..3572697,+!p22@HMG20B!1.02!9.38!HMG20B;;chr19:3572925..3573014,+!p1@HMG20B!1.01!275.46!HMG20B;;chr8:72756063..72756125,-!p1@MSC!1.01!18.75!MSC;;chr2:145277640..145277771,-!p1@ZEB2!1.00!124.25!ZEB2;;chr8:37553261..37553282,+!p2@ZNF703!0.97!65.64!ZNF703;;chr17:41623692..41623715,-!p1@ETV4!0.97!36.34!ETV4;;chr19:3572758..3572795,+!p7@HMG20B!0.96!8.21!HMG20B;;chr3:69985792..69985803,+!p7@MITF!0.96!8.21!MITF;;chr1:2461692..2461710,-!p1@HES5!0.96!8.21!HES5;;chr1:25256439..25256476,-!p3@RUNX3!0.96!8.21!RUNX3;;chr12:54393880..54393962,+!p1@HOXC9!0.96!8.21!HOXC9;;chr2:145277882..145277967,-!p3@ZEB2!0.95!14.07!ZEB2;;chr9:102584159..102584174,+!p2@NR4A3!0.94!14.07!NR4A3;;chr11:615570..615721,-!p2@IRF7!0.93!15.24!IRF7;;chr1:204042233..204042249,+!p1@SOX13!0.92!48.06!SOX13;;chr19:35759824..35759891,+!p1@USF2!0.91!233.26!USF2;;chr19:35759976..35760042,+!p4@USF2!0.91!38.68!USF2;;chr8:128750654..128750793,+!p3@MYC!0.90!29.30!MYC;;chr8:72755987..72756002,-!p7@MSC!0.90!7.03!MSC;;chr12:54378923..54378966,+!p1@HOXC10!0.90!7.03!HOXC10;;chr12:54380036..54380091,+!p4@HOXC10!0.90!7.03!HOXC10;;chr12:85673868..85673881,+!p2@ALX1!0.90!7.03!ALX1;;chr2:176994408..176994492,+!p1@HOXD8!0.90!7.03!HOXD8;;chrY:21906594..21906622,-!p1@KDM5D!0.90!7.03!KDM5D;;chr8:37553292..37553317,+!p1@ZNF703!0.89!169.97!ZNF703;;chr17:40440481..40440550,+!p1@STAT5A!0.89!51.58!STAT5A;;chr16:30583017..30583064,-!p1@ZNF688!0.88!35.17!ZNF688;;chr12:26277929..26277955,-!p3@BHLHE41!0.87!9.38!BHLHE41;;chr19:3573282..3573289,+!p5@HMG20B!0.87!8.21!HMG20B;;chr8:49833978..49833996,-!p1@SNAI2!0.86!134.80!SNAI2;;chr20:32274150..32274166,-!p2@E2F1!0.85!11.72!E2F1;;chr20:50179584..50179611,-!p6@NFATC2!0.84!5.86!NFATC2;;chr6:10412262..10412271,-!p21@TFAP2A!0.84!5.86!TFAP2A;;chr8:72756380..72756427,-!p8@MSC!0.84!5.86!MSC;;chr8:72756522..72756533,-!p13@MSC!0.84!5.86!MSC;;chr9:16728047..16728061,-!p8@BNC2!0.84!5.86!BNC2;;chr16:54320280..54320291,-!p9@IRX3!0.84!5.86!IRX3;;chr17:46806016..46806029,-!p5@HOXB13!0.84!5.86!HOXB13;;chr12:54447637..54447659,+!p4@HOXC4!0.84!5.86!HOXC4;;chr12:85674018..85674039,+!p3@ALX1!0.84!5.86!ALX1;;chr20:306177..306211,+!p2@SOX12!0.83!42.20!SOX12;;chr19:36134528..36134563,+!p1@ETV2!0.83!17.58!ETV2;;chr11:64764435..64764449,-!p1@BATF2!0.83!8.21!BATF2;;chr8:72756023..72756055,-!p6@MSC!0.82!7.03!MSC;;chr12:53614115..53614154,-!p1@RARG!0.81!31.65!RARG;;chr2:71127699..71127744,+!p1@VAX2!0.81!11.72!VAX2;;chr1:204042723..204042784,+!p3@SOX13!0.81!9.38!SOX13;;chr16:54964740..54964789,+!p1@IRX5!0.81!8.21!IRX5;;chr17:46688334..46688385,-!p1@HOXB7!0.81!8.21!HOXB7;;chr8:72756213..72756243,-!p5@MSC!0.80!7.03!MSC;;chr7:44143925..44143970,+!p1@AEBP1!0.79!125.42!AEBP1;;chr1:935496..935509,-!p3@HES4!0.79!8.21!HES4;;chr20:32274179..32274213,-!p1@E2F1!0.78!36.34!E2F1;;chr17:20492136..20492165,+!p1@MEIS3P2!0.78!8.21!MEIS3P2;;chr12:56753869..56753930,-!p1@STAT2!0.77!236.78!STAT2;;chr6:34204973..34204990,+!p4@HMGA1!0.77!71.50!HMGA1;;chr6:1389789..1389821,+!p1@FOXF2!0.77!7.03!FOXF2;;chr3:126076264..126076305,-!p2@KLF15!0.77!7.03!KLF15;;chr12:52431016..52431071,+!p4@NR4A1!0.77!5.86!NR4A1;;chr5:176738887..176738934,-!p1@MXD3!0.76!35.17!MXD3;;chr5:3595977..3595999,+!p1@IRX1!0.76!4.69!IRX1;;chr6:29648890..29648944,-!p1@ZFP57!0.76!4.69!ZFP57;;chr9:102584278..102584285,+!p5@NR4A3!0.76!4.69!NR4A3;;chr2:145277589..145277612,-!p12@ZEB2!0.76!4.69!ZEB2;;chr3:14989186..14989193,+!p10@NR2C2!0.76!4.69!NR2C2;;chr4:109089095..109089144,-!p6@LEF1!0.76!4.69!LEF1;;chr11:125034586..125034604,+!p3@PKNOX2!0.76!4.69!PKNOX2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.76!4.69!HOXC5;;chr12:54410948..54410992,+!p3@HOXC5!0.76!4.69!HOXC5;;chr12:85673977..85674015,+!p1@ALX1!0.76!4.69!ALX1;;chr16:29819122..29819141,+!p34@MAZ!0.76!4.69!MAZ;;chr5:124082322..124082364,-!p1@ZNF608!0.75!12.89!ZNF608;;chr3:126076242..126076257,-!p1@KLF15!0.75!5.86!KLF15;;chr12:52445218..52445237,+!p1@NR4A1!0.74!63.30!NR4A1;;chr8:49833948..49833973,-!p2@SNAI2!0.74!31.65!SNAI2;;chr19:7580944..7581031,+!p1@ZNF358!0.72!144.18!ZNF358;;chr11:47279504..47279563,+!p1@NR1H3!0.72!10.55!NR1H3;;chr17:38256858..38256866,-!p6@NR1D1!0.72!5.86!NR1D1;;chr1:38512457..38512474,-!p1@POU3F1!0.72!4.69!POU3F1;;chr13:41635029..41635044,-!p4@ELF1!0.71!9.38!ELF1;;chr10:111987079..111987115,+!p3@MXI1!0.71!5.86!MXI1;;chr7:44143738..44143760,+!p4@AEBP1!0.70!4.69!AEBP1;;chr11:128392273..128392308,-!p2@ETS1!0.69!18.75!ETS1;;chr3:25469724..25469773,+!p1@RARB!0.69!5.86!RARB;;chr11:695006..695074,-!p1@DEAF1!0.68!69.16!DEAF1;;chr19:1863591..1863611,-!p2@KLF16!0.68!41.03!KLF16;;chr5:124082279..124082319,-!p3@ZNF608!0.68!4.69!ZNF608;;chr20:61493117..61493187,-!p1@TCFL5!0.67!48.06!TCFL5;;chr12:2986275..2986363,-!p1@FOXM1!0.67!42.20!FOXM1;;chr22:38597987..38598021,+!p2@MAFF!0.67!25.79!MAFF;;chr1:249132556..249132573,+!p3@ZNF672!0.66!11.72!ZNF672;;chr6:41040923..41040952,+!p2@NFYA!0.66!10.55!NFYA;;chr11:47270436..47270464,+!p2@NR1H3!0.66!8.21!NR1H3;;chr16:54320646..54320672,-!p2@IRX3!0.66!5.86!IRX3;;chr9:102584241..102584261,+!p4@NR4A3!0.66!5.86!NR4A3;;chr11:706938..707008,-!p3@DEAF1!0.66!4.69!DEAF1;;chr14:68283291..68283323,-!p1@ZFYVE26!0.65!67.99!ZFYVE26;;chr19:57946684..57946723,+!p1@ZNF749!0.65!44.54!ZNF749;;chr19:42788611..42788634,+!p2@CIC!0.65!5.86!CIC;;chr1:165414325..165414369,-!p1@RXRG!0.65!3.52!RXRG;;chr11:16627528..16627550,-!p7@SOX6!0.65!3.52!SOX6;;chr12:26277798..26277809,-!p5@BHLHE41!0.65!3.52!BHLHE41;;chr12:54422217..54422239,+!p3@HOXC6!0.65!3.52!HOXC6;;chr13:41635759..41635774,-!p21@ELF1!0.65!3.52!ELF1;;chr14:74256787..74256858,-!p6@C14orf43!0.65!3.52!C14orf43;;chr9:16728327..16728338,-!p5@BNC2!0.65!3.52!BNC2;;chr9:16727880..16727894,-!p10@BNC2!0.65!3.52!BNC2;;chr7:27195867..27195893,-!p3@HOXA7!0.65!3.52!HOXA7;;chr7:27196267..27196311,-!p1@HOXA7!0.65!3.52!HOXA7;;chr16:4323246..4323299,-!p5@TFAP4!0.65!3.52!TFAP4;;chr16:79634464..79634493,-!p5@MAF!0.65!3.52!MAF;;chr17:46806098..46806118,-!p3@HOXB13!0.65!3.52!HOXB13;;chr19:19569270..19569277,+!p32@GATAD2A!0.65!3.52!GATAD2A;;chr2:96012277..96012290,+!p5@KCNIP3!0.65!3.52!KCNIP3;;chr4:109088940..109089037,-!p4@LEF1!0.65!3.52!LEF1;;chr22:42229100..42229146,+!p1@SREBF2!0.64!390.33!SREBF2;;chr17:38219209..38219230,+!p1@THRA!0.64!51.58!THRA;;chr12:54772960..54773015,-!p3@ZNF385A!0.64!18.75!ZNF385A;;chr12:52430894..52430952,+!p3@NR4A1!0.64!7.03!NR4A1;;chr19:47922750..47922795,-!p1@MEIS3!0.64!5.86!MEIS3;;chr11:47236584..47236679,+!p1@DDB2!0.63!42.20!DDB2;;chr18:72922811..72922827,+!p1@TSHZ1!0.63!18.75!TSHZ1;;chr8:22550982..22550999,-!p1@EGR3!0.63!10.55!EGR3;;chr16:3185125..3185173,+!p1@ZNF213!0.63!9.38!ZNF213;;chr19:56152332..56152347,+!p4@ZNF580!0.63!8.21!ZNF580;;chr19:17356189..17356221,-!p2@NR2F6!0.63!5.86!NR2F6;;chr19:7584815..7584829,+!p2@ZNF358!0.63!4.69!ZNF358;;chr2:97202480..97202499,+!p1@ARID5A!0.62!38.68!ARID5A;;chr16:88519669..88519726,+!p1@ZFPM1!0.62!33.99!ZFPM1;;chr12:124873852..124873881,-!p3@NCOR2!0.62!22.27!NCOR2;;chr6:34205372..34205412,+!p5@HMGA1!0.62!18.75!HMGA1;;chr7:74072256..74072279,+!p3@GTF2I!0.62!7.03!GTF2I;;chr8:125985531..125985571,+!p1@ZNF572!0.62!7.03!ZNF572;;chr19:42788636..42788660,+!p1@CIC!0.62!5.86!CIC;;chr6:41555169..41555196,+!p6@FOXP4!0.62!3.52!FOXP4;;chr19:19496728..19496813,+!p2@GATAD2A!0.61!44.54!GATAD2A;;chr10:35416142..35416169,+!p3@CREM!0.61!9.38!CREM;;chr14:24837368..24837401,+!p1@NFATC4!0.61!8.21!NFATC4;;chr14:105886349..105886360,+!p3@MTA1!0.61!4.69!MTA1;;chr16:54320101..54320125,-!p4@IRX3!0.61!4.69!IRX3;;chr16:54320158..54320200,-!p5@IRX3!0.61!4.69!IRX3;;chr22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57747..72057854,+!p4@THAP2!0.24!3.52!THAP2;;chr8:28243934..28243993,-!p3@ZNF395!0.24!3.52!ZNF395;;chr16:29818132..29818144,+!p12@MAZ!0.24!2.34!MAZ;;chr1:8483821..8483845,-!p11@RERE!0.24!2.34!RERE;;chr14:23755247..23755278,-!p2@HOMEZ!0.24!2.34!HOMEZ;;chr10:21822984..21823023,+!p5@MLLT10!0.24!1.17!MLLT10;;chr12:56754054..56754067,-!p3@STAT2!0.24!1.17!STAT2;;chr13:46626824..46626835,-!p8@ZC3H13!0.24!1.17!ZC3H13;;chr16:69600209..69600234,+!p4@NFAT5!0.24!1.17!NFAT5;;chr17:2304082..2304103,-!p5@MNT!0.24!1.17!MNT;;chr18:52989565..52989623,-!p9@TCF4!0.24!1.17!TCF4;;chrX:48901030..48901050,-!p4@TFE3!0.24!1.17!TFE3;;chr7:14028743..14028799,-!p3@ETV1!0.24!1.17!ETV1;;chr8:37963466..37963506,+!p3@ASH2L!0.24!1.17!ASH2L;;chr19:49139477..49139552,-!p4@DBP!0.24!1.17!DBP;;chr19:57078830..57078848,+!p4@ZNF470!0.24!1.17!ZNF470;;chr19:58239007..58239016,-!p2@ZNF671!0.24!1.17!ZNF671;;chr22:41697484..41697496,+!p3@ZC3H7B!0.24!1.17!ZC3H7B;;chr11:65667846..65667868,-!p1@FOSL1!0.23!39.85!FOSL1;;chr7:106809432..106809455,+!p1@HBP1!0.23!29.30!HBP1;;chr14:74353530..74353571,+!p1@ZNF410!0.23!28.13!ZNF410;;chr19:8579030..8579061,-!p1@ZNF414!0.23!24.62!ZNF414;;chr22:21356016..21356105,-!p1@THAP7!0.23!23.44!THAP7;;chr16:30798492..30798535,-!p1@ZNF629!0.23!23.44!ZNF629;;chr8:145159357..145159373,+!p3@MAF1!0.23!18.75!MAF1;;chr12:54020107..54020196,-!p1@ATF7!0.23!14.07!ATF7;;chr3:178789522..178789564,-!p2@ZMAT3!0.23!10.55!ZMAT3;;chr8:144349606..144349656,+!p1@GLI4!0.23!10.55!GLI4;;chr6:108880956..108881011,+!p1@FOXO3!0.23!9.38!FOXO3;;chr19:18392274..18392286,-!p3@JUND!0.23!9.38!JUND;;chr19:19516464..19516492,+!p4@GATAD2A!0.23!7.03!GATAD2A;;chr18:22932080..22932170,-!p1@ZNF521!0.23!5.86!ZNF521;;chr19:58071201..58071238,-!p1@ZNF550!0.23!4.69!ZNF550;;chr19:6280025..6280040,-!p2@MLLT1!0.23!4.69!MLLT1;;chr1:8483756..8483809,-!p5@RERE!0.23!3.52!RERE;;chr14:21994337..21994442,-!p1@SALL2!0.23!3.52!SALL2;;chr12:57919364..57919394,+!p4@MBD6!0.23!2.34!MBD6;;chr17:17723626..17723663,-!p4@SREBF1!0.23!2.34!SREBF1;;chr19:12512062..12512094,-!p1@ZNF799!0.23!2.34!ZNF799;;chr19:15560730..15560772,-!p3@WIZ!0.23!2.34!WIZ;;chr4:95128841..95128865,+!p4@SMARCAD1!0.23!2.34!SMARCAD1;;chr8:145159324..145159333,+!p5@MAF1!0.23!2.34!MAF1;;chr6:21594391..21594431,+!p9@SOX4!0.23!1.17!SOX4;;chr7:152133109..152133116,-!p2@MLL3!0.23!1.17!MLL3;;chr12:125003087..125003141,-!p4@NCOR2!0.23!1.17!NCOR2;;chr14:69262827..69262841,-!p7@ZFP36L1!0.23!1.17!ZFP36L1;;chr19:13106383..13106423,+!p8@NFIX!0.23!1.17!NFIX;;chr19:35168547..35168564,+!p3@ZNF302!0.23!1.17!ZNF302;;chr19:37464063..37464127,+!p2@ZNF568!0.23!1.17!ZNF568;;chr2:231077626..231077651,-!p6@SP110!0.23!1.17!SP110;;chr10:3827389..3827408,-!p1@KLF6!0.22!116.05!KLF6;;chr16:89939979..89940011,+!p2@TCF25!0.22!57.44!TCF25;;chr19:19516561..19516644,+!p1@GATAD2A!0.22!31.65!GATAD2A;;chr7:148892653..148892729,+!p1@ZNF282!0.22!21.10!ZNF282;;chr16:29817617..29817664,+!p4@MAZ!0.22!15.24!MAZ;;chr7:28220198..28220269,-!p2@JAZF1!0.22!12.89!JAZF1;;chr17:17740330..17740349,-!p3@SREBF1!0.22!9.38!SREBF1;;chr19:35759473..35759521,+!p3@USF2!0.22!8.21!USF2;;chr4:4291944..4292011,+!p1@ZBTB49!0.22!7.03!ZBTB49;;chr6:28220023..28220053,-!p1@ZKSCAN4!0.22!5.86!ZKSCAN4;;chr10:35415882..35415941,+!p4@CREM!0.22!5.86!CREM;;chr4:95129061..95129085,+!p3@SMARCAD1!0.22!4.69!SMARCAD1;;chr19:36705617..36705644,+!p4@ZNF146!0.22!3.52!ZNF146;;chr19:36980429..36980448,-!p1@ZNF566!0.22!3.52!ZNF566;;chr2:157199008..157199023,-!p3@NR4A2!0.22!2.34!NR4A2;;chr1:154975110..154975149,+!p2@ZBTB7B!0.22!2.34!ZBTB7B;;chr19:57078386..57078407,+!p3@ZNF470!0.22!1.17!ZNF470;;
+|ffid_belonging_in_development=CL:0000133,CL:0000221
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11351-117H1: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:44, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0