FFCP PHASE1:Mm9::chr5:107926781..107926821,+: Difference between revisions
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|id=chr5:107926781..107926821,+ | |id=chr5:107926781..107926821,+ | ||
|ontology_enrichment_celltype=CL:0000540!4.07e-10!33;CL:0000047!4.07e-10!33;CL:0000031!4.07e-10!33;CL:0000404!4.07e-10!33;CL:0000117!2.65e-08!23;CL:0000337!2.65e-08!23 | |ontology_enrichment_celltype=CL:0000540!4.07e-10!33;CL:0000047!4.07e-10!33;CL:0000031!4.07e-10!33;CL:0000404!4.07e-10!33;CL:0000117!2.65e-08!23;CL:0000337!2.65e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.58e-11,33;CL:0000047,1.58e-11,33;CL:0000031,1.58e-11,33;CL:0000404,1.58e-11,33;CL:0000117,9.48e-10,23;CL:0000337,9.48e-10,23;CL:0000393,4.19e-08,39;CL:0000211,4.19e-08,39;CL:0002319,2.48e-07,43;CL:0000221,6.15e-07,44;CL:0000133,6.15e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.12e-22!71;UBERON:0003075!3.12e-22!71;UBERON:0007284!3.12e-22!71;UBERON:0007811!5.38e-21!86;UBERON:0000073!8.93e-21!75;UBERON:0001016!8.93e-21!75;UBERON:0001017!1.01e-20!73;UBERON:0005743!1.01e-20!73;UBERON:0000955!9.83e-19!50;UBERON:0006238!9.83e-19!50;UBERON:0001049!1.06e-18!52;UBERON:0005068!1.06e-18!52;UBERON:0006241!1.06e-18!52;UBERON:0007135!1.06e-18!52;UBERON:0004121!2.34e-18!102;UBERON:0000924!2.34e-18!102;UBERON:0006601!2.34e-18!102;UBERON:0002616!4.09e-18!49;UBERON:0000033!8.08e-18!63;UBERON:0000153!2.66e-17!94;UBERON:0003056!3.41e-16!49;UBERON:0003080!6.86e-16!40;UBERON:0002780!2.85e-15!39;UBERON:0001890!2.85e-15!39;UBERON:0006240!2.85e-15!39;UBERON:0002020!5.46e-14!34;UBERON:0002791!3.48e-12!29;UBERON:0003528!3.48e-12!29;UBERON:0001893!3.48e-12!29;UBERON:0000956!6.48e-09!21;UBERON:0001869!6.48e-09!21;UBERON:0000203!6.48e-09!21;UBERON:0002021!1.91e-08!10;UBERON:0000411!1.91e-08!10;UBERON:0001950!1.91e-08!10;UBERON:0002619!1.34e-07!17 | |ontology_enrichment_uberon=UBERON:0002346!3.12e-22!71;UBERON:0003075!3.12e-22!71;UBERON:0007284!3.12e-22!71;UBERON:0007811!5.38e-21!86;UBERON:0000073!8.93e-21!75;UBERON:0001016!8.93e-21!75;UBERON:0001017!1.01e-20!73;UBERON:0005743!1.01e-20!73;UBERON:0000955!9.83e-19!50;UBERON:0006238!9.83e-19!50;UBERON:0001049!1.06e-18!52;UBERON:0005068!1.06e-18!52;UBERON:0006241!1.06e-18!52;UBERON:0007135!1.06e-18!52;UBERON:0004121!2.34e-18!102;UBERON:0000924!2.34e-18!102;UBERON:0006601!2.34e-18!102;UBERON:0002616!4.09e-18!49;UBERON:0000033!8.08e-18!63;UBERON:0000153!2.66e-17!94;UBERON:0003056!3.41e-16!49;UBERON:0003080!6.86e-16!40;UBERON:0002780!2.85e-15!39;UBERON:0001890!2.85e-15!39;UBERON:0006240!2.85e-15!39;UBERON:0002020!5.46e-14!34;UBERON:0002791!3.48e-12!29;UBERON:0003528!3.48e-12!29;UBERON:0001893!3.48e-12!29;UBERON:0000956!6.48e-09!21;UBERON:0001869!6.48e-09!21;UBERON:0000203!6.48e-09!21;UBERON:0002021!1.91e-08!10;UBERON:0000411!1.91e-08!10;UBERON:0001950!1.91e-08!10;UBERON:0002619!1.34e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.41e-26,75;UBERON:0001017,2.71e-26,73;UBERON:0000073,2.55e-25,54;UBERON:0001049,1.38e-23,52;UBERON:0005068,1.38e-23,52;UBERON:0006241,1.38e-23,52;UBERON:0007135,1.38e-23,52;UBERON:0002346,1.94e-23,64;UBERON:0003075,1.94e-23,64;UBERON:0007284,1.94e-23,64;UBERON:0000955,2.71e-21,47;UBERON:0006238,2.71e-21,47;UBERON:0002616,1.51e-20,46;UBERON:0003080,1.59e-19,40;UBERON:0004121,2.79e-19,95;UBERON:0000924,2.79e-19,95;UBERON:0006601,2.79e-19,95;UBERON:0002780,9.11e-19,39;UBERON:0001890,9.11e-19,39;UBERON:0006240,9.11e-19,39;UBERON:0003056,8.97e-18,49;UBERON:0010371,1.09e-17,73;UBERON:0002020,2.54e-17,34;UBERON:0003528,3.97e-15,29;UBERON:0002791,3.97e-15,29;UBERON:0001893,3.97e-15,29;UBERON:0010314,7.45e-14,92;UBERON:0000956,3.84e-11,21;UBERON:0001869,3.84e-11,21;UBERON:0000203,3.84e-11,21;UBERON:0002021,6.36e-10,10;UBERON:0000411,6.36e-10,10;UBERON:0001950,6.36e-10,10;UBERON:0002619,1.49e-09,17 | |||
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| ||
|short_description=p1@A830010M20Rik | |short_description=p1@A830010M20Rik | ||
}} | }} |
Revision as of 12:13, 13 November 2012
Short description: | p1@A830010M20Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_A830010M20Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000060553, ENSMUST00000152474, NM_001168557_5end |
EntrezGene: | A830010M20Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.58e-11 | 33 |
neuronal stem cell | 1.58e-11 | 33 |
neuroblast | 1.58e-11 | 33 |
electrically signaling cell | 1.58e-11 | 33 |
CNS neuron (sensu Vertebrata) | 9.48e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.48e-10 | 23 |
electrically responsive cell | 4.19e-08 | 39 |
electrically active cell | 4.19e-08 | 39 |
neural cell | 2.48e-07 | 43 |
ectodermal cell | 6.15e-07 | 44 |
neurectodermal cell | 6.15e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.41e-26 | 75 |
central nervous system | 2.71e-26 | 73 |
regional part of nervous system | 2.55e-25 | 54 |
neural tube | 1.38e-23 | 52 |
neural rod | 1.38e-23 | 52 |
future spinal cord | 1.38e-23 | 52 |
neural keel | 1.38e-23 | 52 |
neurectoderm | 1.94e-23 | 64 |
neural plate | 1.94e-23 | 64 |
presumptive neural plate | 1.94e-23 | 64 |
brain | 2.71e-21 | 47 |
future brain | 2.71e-21 | 47 |
regional part of brain | 1.51e-20 | 46 |
anterior neural tube | 1.59e-19 | 40 |
ectoderm-derived structure | 2.79e-19 | 95 |
ectoderm | 2.79e-19 | 95 |
presumptive ectoderm | 2.79e-19 | 95 |
regional part of forebrain | 9.11e-19 | 39 |
forebrain | 9.11e-19 | 39 |
future forebrain | 9.11e-19 | 39 |
pre-chordal neural plate | 8.97e-18 | 49 |
ecto-epithelium | 1.09e-17 | 73 |
gray matter | 2.54e-17 | 34 |
brain grey matter | 3.97e-15 | 29 |
regional part of telencephalon | 3.97e-15 | 29 |
telencephalon | 3.97e-15 | 29 |
structure with developmental contribution from neural crest | 7.45e-14 | 92 |
cerebral cortex | 3.84e-11 | 21 |
cerebral hemisphere | 3.84e-11 | 21 |
pallium | 3.84e-11 | 21 |
occipital lobe | 6.36e-10 | 10 |
visual cortex | 6.36e-10 | 10 |
neocortex | 6.36e-10 | 10 |
regional part of cerebral cortex | 1.49e-09 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.