FFCP PHASE1:Mm9::chr9:74918955..74919035,+: Difference between revisions
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|id=chr9:74918955..74919035,+ | |id=chr9:74918955..74919035,+ | ||
|ontology_enrichment_celltype=CL:0000540!4.21e-14!33;CL:0000047!4.21e-14!33;CL:0000031!4.21e-14!33;CL:0000404!4.21e-14!33;CL:0000117!9.72e-12!23;CL:0000337!9.72e-12!23;CL:0000393!1.79e-10!39;CL:0000211!1.79e-10!39;CL:0002319!3.15e-08!43;CL:0000221!3.53e-08!44;CL:0000133!3.53e-08!44 | |ontology_enrichment_celltype=CL:0000540!4.21e-14!33;CL:0000047!4.21e-14!33;CL:0000031!4.21e-14!33;CL:0000404!4.21e-14!33;CL:0000117!9.72e-12!23;CL:0000337!9.72e-12!23;CL:0000393!1.79e-10!39;CL:0000211!1.79e-10!39;CL:0002319!3.15e-08!43;CL:0000221!3.53e-08!44;CL:0000133!3.53e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.68e-14,33;CL:0000047,3.68e-14,33;CL:0000031,3.68e-14,33;CL:0000404,3.68e-14,33;CL:0000117,8.71e-12,23;CL:0000337,8.71e-12,23;CL:0000393,1.63e-10,39;CL:0000211,1.63e-10,39;CL:0002319,3.59e-08,43;CL:0000221,4.00e-08,44;CL:0000133,4.00e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.75e-23!75;UBERON:0001016!1.75e-23!75;UBERON:0001017!2.97e-23!73;UBERON:0005743!2.97e-23!73;UBERON:0004121!3.37e-23!102;UBERON:0000924!3.37e-23!102;UBERON:0006601!3.37e-23!102;UBERON:0002346!1.31e-22!71;UBERON:0003075!1.31e-22!71;UBERON:0007284!1.31e-22!71;UBERON:0000033!6.26e-21!63;UBERON:0001049!9.65e-20!52;UBERON:0005068!9.65e-20!52;UBERON:0006241!9.65e-20!52;UBERON:0007135!9.65e-20!52;UBERON:0003056!3.48e-19!49;UBERON:0000955!3.54e-19!50;UBERON:0006238!3.54e-19!50;UBERON:0002616!1.52e-18!49;UBERON:0000153!4.11e-17!94;UBERON:0007811!1.34e-16!86;UBERON:0002020!4.19e-16!34;UBERON:0003080!4.69e-16!40;UBERON:0002780!2.05e-15!39;UBERON:0001890!2.05e-15!39;UBERON:0006240!2.05e-15!39;UBERON:0002791!9.85e-14!29;UBERON:0003528!9.85e-14!29;UBERON:0001893!9.85e-14!29;UBERON:0000956!1.78e-09!21;UBERON:0001869!1.78e-09!21;UBERON:0000203!1.78e-09!21;UBERON:0002021!4.00e-08!10;UBERON:0000411!4.00e-08!10;UBERON:0001950!4.00e-08!10;UBERON:0002619!1.50e-07!17 | |ontology_enrichment_uberon=UBERON:0000073!1.75e-23!75;UBERON:0001016!1.75e-23!75;UBERON:0001017!2.97e-23!73;UBERON:0005743!2.97e-23!73;UBERON:0004121!3.37e-23!102;UBERON:0000924!3.37e-23!102;UBERON:0006601!3.37e-23!102;UBERON:0002346!1.31e-22!71;UBERON:0003075!1.31e-22!71;UBERON:0007284!1.31e-22!71;UBERON:0000033!6.26e-21!63;UBERON:0001049!9.65e-20!52;UBERON:0005068!9.65e-20!52;UBERON:0006241!9.65e-20!52;UBERON:0007135!9.65e-20!52;UBERON:0003056!3.48e-19!49;UBERON:0000955!3.54e-19!50;UBERON:0006238!3.54e-19!50;UBERON:0002616!1.52e-18!49;UBERON:0000153!4.11e-17!94;UBERON:0007811!1.34e-16!86;UBERON:0002020!4.19e-16!34;UBERON:0003080!4.69e-16!40;UBERON:0002780!2.05e-15!39;UBERON:0001890!2.05e-15!39;UBERON:0006240!2.05e-15!39;UBERON:0002791!9.85e-14!29;UBERON:0003528!9.85e-14!29;UBERON:0001893!9.85e-14!29;UBERON:0000956!1.78e-09!21;UBERON:0001869!1.78e-09!21;UBERON:0000203!1.78e-09!21;UBERON:0002021!4.00e-08!10;UBERON:0000411!4.00e-08!10;UBERON:0001950!4.00e-08!10;UBERON:0002619!1.50e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.30e-23,64;UBERON:0003075,1.30e-23,64;UBERON:0007284,1.30e-23,64;UBERON:0004121,1.70e-23,95;UBERON:0000924,1.70e-23,95;UBERON:0006601,1.70e-23,95;UBERON:0001016,1.84e-23,75;UBERON:0001017,3.14e-23,73;UBERON:0010371,1.12e-21,73;UBERON:0000073,5.98e-21,54;UBERON:0001049,1.30e-19,52;UBERON:0005068,1.30e-19,52;UBERON:0006241,1.30e-19,52;UBERON:0007135,1.30e-19,52;UBERON:0003056,3.74e-19,49;UBERON:0000955,3.83e-17,47;UBERON:0006238,3.83e-17,47;UBERON:0002616,1.59e-16,46;UBERON:0002020,4.75e-16,34;UBERON:0003080,5.21e-16,40;UBERON:0010314,6.11e-16,92;UBERON:0002780,2.28e-15,39;UBERON:0001890,2.28e-15,39;UBERON:0006240,2.28e-15,39;UBERON:0003528,1.14e-13,29;UBERON:0002791,1.14e-13,29;UBERON:0001893,1.14e-13,29;UBERON:0000956,2.12e-09,21;UBERON:0001869,2.12e-09,21;UBERON:0000203,2.12e-09,21;UBERON:0002021,3.73e-08,10;UBERON:0000411,3.73e-08,10;UBERON:0001950,3.73e-08,10;UBERON:0002619,1.81e-07,17 | |||
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| ||
|short_description=p2@Myo5a | |short_description=p2@Myo5a | ||
}} | }} |
Revision as of 14:14, 13 November 2012
Short description: | p2@Myo5a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Myo5a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000123128, ENSMUST00000136871, NM_010864, uc009qrq.1, uc009qrr.1_5end |
EntrezGene: | Myo5a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.68e-14 | 33 |
neuronal stem cell | 3.68e-14 | 33 |
neuroblast | 3.68e-14 | 33 |
electrically signaling cell | 3.68e-14 | 33 |
CNS neuron (sensu Vertebrata) | 8.71e-12 | 23 |
neuroblast (sensu Vertebrata) | 8.71e-12 | 23 |
electrically responsive cell | 1.63e-10 | 39 |
electrically active cell | 1.63e-10 | 39 |
neural cell | 3.59e-08 | 43 |
ectodermal cell | 4.00e-08 | 44 |
neurectodermal cell | 4.00e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.30e-23 | 64 |
neural plate | 1.30e-23 | 64 |
presumptive neural plate | 1.30e-23 | 64 |
ectoderm-derived structure | 1.70e-23 | 95 |
ectoderm | 1.70e-23 | 95 |
presumptive ectoderm | 1.70e-23 | 95 |
nervous system | 1.84e-23 | 75 |
central nervous system | 3.14e-23 | 73 |
ecto-epithelium | 1.12e-21 | 73 |
regional part of nervous system | 5.98e-21 | 54 |
neural tube | 1.30e-19 | 52 |
neural rod | 1.30e-19 | 52 |
future spinal cord | 1.30e-19 | 52 |
neural keel | 1.30e-19 | 52 |
pre-chordal neural plate | 3.74e-19 | 49 |
brain | 3.83e-17 | 47 |
future brain | 3.83e-17 | 47 |
regional part of brain | 1.59e-16 | 46 |
gray matter | 4.75e-16 | 34 |
anterior neural tube | 5.21e-16 | 40 |
structure with developmental contribution from neural crest | 6.11e-16 | 92 |
regional part of forebrain | 2.28e-15 | 39 |
forebrain | 2.28e-15 | 39 |
future forebrain | 2.28e-15 | 39 |
brain grey matter | 1.14e-13 | 29 |
regional part of telencephalon | 1.14e-13 | 29 |
telencephalon | 1.14e-13 | 29 |
cerebral cortex | 2.12e-09 | 21 |
cerebral hemisphere | 2.12e-09 | 21 |
pallium | 2.12e-09 | 21 |
occipital lobe | 3.73e-08 | 10 |
visual cortex | 3.73e-08 | 10 |
neocortex | 3.73e-08 | 10 |
regional part of cerebral cortex | 1.81e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.