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FFCP PHASE1:Mm9::chr17:25570208..25570252,-: Difference between revisions

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|id=chr17:25570208..25570252,-
|id=chr17:25570208..25570252,-
|ontology_enrichment_celltype=CL:0000117!1.48e-10!23;CL:0000337!1.48e-10!23
|ontology_enrichment_celltype=CL:0000117!1.48e-10!23;CL:0000337!1.48e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.01e-12,23;CL:0000337,3.01e-12,23;CL:0002609,1.38e-08,6;CL:0000540,6.81e-07,33;CL:0000047,6.81e-07,33;CL:0000031,6.81e-07,33;CL:0000404,6.81e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!4.28e-15!49;UBERON:0002346!9.35e-15!71;UBERON:0003075!9.35e-15!71;UBERON:0007284!9.35e-15!71;UBERON:0002020!2.47e-12!34;UBERON:0002780!7.65e-12!39;UBERON:0001890!7.65e-12!39;UBERON:0006240!7.65e-12!39;UBERON:0003080!9.02e-12!40;UBERON:0000033!9.05e-12!63;UBERON:0001049!4.43e-11!52;UBERON:0005068!4.43e-11!52;UBERON:0006241!4.43e-11!52;UBERON:0007135!4.43e-11!52;UBERON:0002791!2.24e-10!29;UBERON:0003528!2.24e-10!29;UBERON:0001893!2.24e-10!29;UBERON:0004121!4.41e-10!102;UBERON:0000924!4.41e-10!102;UBERON:0006601!4.41e-10!102;UBERON:0000955!2.25e-09!50;UBERON:0006238!2.25e-09!50;UBERON:0001017!5.65e-09!73;UBERON:0005743!5.65e-09!73;UBERON:0000073!5.86e-09!75;UBERON:0001016!5.86e-09!75;UBERON:0002616!8.38e-09!49;UBERON:0000468!3.52e-07!333;UBERON:0000956!6.87e-07!21;UBERON:0001869!6.87e-07!21;UBERON:0000203!6.87e-07!21
|ontology_enrichment_uberon=UBERON:0003056!4.28e-15!49;UBERON:0002346!9.35e-15!71;UBERON:0003075!9.35e-15!71;UBERON:0007284!9.35e-15!71;UBERON:0002020!2.47e-12!34;UBERON:0002780!7.65e-12!39;UBERON:0001890!7.65e-12!39;UBERON:0006240!7.65e-12!39;UBERON:0003080!9.02e-12!40;UBERON:0000033!9.05e-12!63;UBERON:0001049!4.43e-11!52;UBERON:0005068!4.43e-11!52;UBERON:0006241!4.43e-11!52;UBERON:0007135!4.43e-11!52;UBERON:0002791!2.24e-10!29;UBERON:0003528!2.24e-10!29;UBERON:0001893!2.24e-10!29;UBERON:0004121!4.41e-10!102;UBERON:0000924!4.41e-10!102;UBERON:0006601!4.41e-10!102;UBERON:0000955!2.25e-09!50;UBERON:0006238!2.25e-09!50;UBERON:0001017!5.65e-09!73;UBERON:0005743!5.65e-09!73;UBERON:0000073!5.86e-09!75;UBERON:0001016!5.86e-09!75;UBERON:0002616!8.38e-09!49;UBERON:0000468!3.52e-07!333;UBERON:0000956!6.87e-07!21;UBERON:0001869!6.87e-07!21;UBERON:0000203!6.87e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.79e-15,34;UBERON:0003528,8.61e-14,29;UBERON:0002791,8.61e-14,29;UBERON:0001893,8.61e-14,29;UBERON:0003056,6.20e-13,49;UBERON:0002780,2.10e-11,39;UBERON:0001890,2.10e-11,39;UBERON:0006240,2.10e-11,39;UBERON:0003080,6.28e-11,40;UBERON:0002346,1.81e-10,64;UBERON:0003075,1.81e-10,64;UBERON:0007284,1.81e-10,64;UBERON:0000956,1.08e-09,21;UBERON:0001869,1.08e-09,21;UBERON:0000203,1.08e-09,21;UBERON:0000073,1.53e-09,54;UBERON:0001049,1.91e-09,52;UBERON:0005068,1.91e-09,52;UBERON:0006241,1.91e-09,52;UBERON:0007135,1.91e-09,52;UBERON:0000955,2.56e-09,47;UBERON:0006238,2.56e-09,47;UBERON:0010314,3.98e-09,92;UBERON:0002616,1.54e-08,46;UBERON:0001017,5.26e-08,73;UBERON:0010371,5.30e-08,73;UBERON:0001016,1.51e-07,75;UBERON:0004121,4.06e-07,95;UBERON:0000924,4.06e-07,95;UBERON:0006601,4.06e-07,95;UBERON:0000369,4.87e-07,5;UBERON:0002435,4.87e-07,5;UBERON:0000204,4.87e-07,5;UBERON:0010082,4.87e-07,5
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86717736492834,5.81890077199236,3.1691570175309,0,0,0,0,0,0,0.384218305321555,6.32506635081714,9.45041568321835,6.30974884054146,1.99955689082663,0.662605622854841,8.08439274818697,7.57179221044067,9.19218786610021,0,1.14918604276669,0.46081959976873,5.67111037239834,4.11694396210843,4.68822033501084,0.558365998002762,0.56276261003168,1.5279824777681,1.76777151284201,0.996601765593721,5.77838282058432,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,1.92974780784272,1.21439728736295,1.52232739156071,0.461230994512117,0.301445281105245,0.470354828542819,1.63366568728578,0,0,0.884610551949874,0.970601099684455,0,0,0,0,0,0.510914110417183,0,0,0,0.449371918214468,6.8625090422794,17.0889918873496,1.56441888173049,1.53429274398198,0.62336413367868,3.0825839982874,0.407357455401265,0,0.252722758433675,0.841767423545896,0.910843100738926,0.459804208866946,0.720248519221397,1.9591626318643,5.8511389270142,4.99643509110914,6.1843138209421,1.55222022443409,0.431135985865684,1.13463648100692,1.05570674498369,1.31517439456545,0,0,0.205782136407943,1.19420560091096,0,0,0,2.27838349789052,1.64168241986767,0.720248245844059,0.946978942340841,0.787056926989615,0.617068451549513,0.930135779001631,1.07309360559848,0.934122738937356,0.658239399653922,1.14917224855367,0.56748166682099,0.877199924551994,0.878200461164203,0.671032093801859,6.72927835405207,11.0107935245834,0,0.264450566663544,0.853153002140936,2.78684006232526,1.15980715189884,1.00841762311671,0.889512175379481,0.570676878337677,1.42358718463353,0.164698954724011,0,0.596869416123452,0.38992817423824,0,0.432276099749388,0.597423819763102,0,0.685491075658373,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0.509235257325564,0.469380496577004,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0,0.395287777946524,9.96096080907602,0.141940085208269,0.534196811001766,0.81443479676788,0.494910368917606,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0,0,0,0.680879211507576,1.08036656418786,0.776152102696527,1.07168517515796,0.354680467284547,0.356737635204141,0.822745103010605,0.913394847343798,0,0,0,0,0,0.120625849856312,0,0,0.874442509889552,0.927126510052548,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,1.89801596148681,0.609958401380546,1.18805874903981,0,0,0.404593039154462,0.826534557253359,0.26175594198403,1.16653475962614,0,0,1.79419855252775,0.992750942742586,1.55560950675238,0.645799117388655,0.506868376472335,0.821500670520278,0.13020438484395,0.104859344425711,0.483168241652012,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.192423683280659,0,0.226730383615211,0,0,0,5.21611903886914,0.750729901804728,0.549454872801795,0.214368379079066,0.501572104035363,2.82375921308533,0.460325236507177,1.14579102687879,1.71853182343688,0.685082519770642,0,2.70009000092722,1.35096360967266,0.453142408984205,1.03552062350364,0.103787347584177,2.39414924040619,2.04880326904961,2.18796045361465,1.67690530102386,1.10306105070008,1.77797382241292,3.09052585858341,0.962757628775446,0.758091635291392,1.2673964994512,0.754505365544305,1.49826411951812,1.28050304809739,1.43588672389033,1.42888107384922,1.97003354106254,1.73618298417335,1.23625770240992,1.17759136107518,0.342869252385415,1.06485483695602,1.1921809497366,1.0174249164263,1.03520318456864,1.09998990259179,1.28049581010941,1.05227884575137,1.49384525230448,0,2.13543032623513,1.18205378850676,0.818462086339379,1.54936841185966,1.73615949883027,3.49734809113124,1.16965804222704,1.28922632428979,0.956441660344217,0.220591419119515,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86717736492834,5.81890077199236,3.1691570175309,0,0,0,0,0,0,0.384218305321555,6.32506635081714,9.45041568321835,6.30974884054146,1.99955689082663,0.662605622854841,8.08439274818697,7.57179221044067,9.19218786610021,0,1.14918604276669,0.46081959976873,5.67111037239834,4.11694396210843,4.68822033501084,0.558365998002762,0.56276261003168,1.5279824777681,1.76777151284201,0.996601765593721,5.77838282058432,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,1.92974780784272,1.21439728736295,1.52232739156071,0.461230994512117,0.301445281105245,0.470354828542819,1.63366568728578,0,0,0.884610551949874,0.970601099684455,0,0,0,0,0,0.510914110417183,0,0,0,0.449371918214468,6.8625090422794,17.0889918873496,1.56441888173049,1.53429274398198,0.62336413367868,3.0825839982874,0.407357455401265,0,0.252722758433675,0.841767423545896,0.910843100738926,0.459804208866946,0.720248519221397,1.9591626318643,5.8511389270142,4.99643509110914,6.1843138209421,1.55222022443409,0.431135985865684,1.13463648100692,1.05570674498369,1.31517439456545,0,0,0.205782136407943,1.19420560091096,0,0,0,2.27838349789052,1.64168241986767,0.720248245844059,0.946978942340841,0.787056926989615,0.617068451549513,0.930135779001631,1.07309360559848,0.934122738937356,0.658239399653922,1.14917224855367,0.56748166682099,0.877199924551994,0.878200461164203,0.671032093801859,6.72927835405207,11.0107935245834,0,0.264450566663544,0.853153002140936,2.78684006232526,1.15980715189884,1.00841762311671,0.889512175379481,0.570676878337677,1.42358718463353,0.164698954724011,0,0.596869416123452,0.38992817423824,0,0.432276099749388,0.597423819763102,0,0.685491075658373,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0.509235257325564,0.469380496577004,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0,0.395287777946524,9.96096080907602,0.141940085208269,0.534196811001766,0.81443479676788,0.494910368917606,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0,0,0,0.680879211507576,1.08036656418786,0.776152102696527,1.07168517515796,0.354680467284547,0.356737635204141,0.822745103010605,0.913394847343798,0,0,0,0,0,0.120625849856312,0,0,0.874442509889552,0.927126510052548,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,1.89801596148681,0.609958401380546,1.18805874903981,0,0,0.404593039154462,0.826534557253359,0.26175594198403,1.16653475962614,0,0,1.79419855252775,0.992750942742586,1.55560950675238,0.645799117388655,0.506868376472335,0.821500670520278,0.13020438484395,0.104859344425711,0.483168241652012,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.192423683280659,0,0.226730383615211,0,0,0,5.21611903886914,0.750729901804728,0.549454872801795,0.214368379079066,0.501572104035363,2.82375921308533,0.460325236507177,1.14579102687879,1.71853182343688,0.685082519770642,0,2.70009000092722,1.35096360967266,0.453142408984205,1.03552062350364,0.103787347584177,2.39414924040619,2.04880326904961,2.18796045361465,1.67690530102386,1.10306105070008,1.77797382241292,3.09052585858341,0.962757628775446,0.758091635291392,1.2673964994512,0.754505365544305,1.49826411951812,1.28050304809739,1.43588672389033,1.42888107384922,1.97003354106254,1.73618298417335,1.23625770240992,1.17759136107518,0.342869252385415,1.06485483695602,1.1921809497366,1.0174249164263,1.03520318456864,1.09998990259179,1.28049581010941,1.05227884575137,1.49384525230448,0,2.13543032623513,1.18205378850676,0.818462086339379,1.54936841185966,1.73615949883027,3.49734809113124,1.16965804222704,1.28922632428979,0.956441660344217,0.220591419119515,0.231867835620421
|short_description=p3@Cacna1h
|short_description=p3@Cacna1h
}}
}}

Revision as of 14:33, 13 November 2012

Short description:p3@Cacna1h
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cacna1h_5end
Coexpression cluster:MCL_coexpression_mm9:295
Association with transcript: 0bp_to_ENSMUST00000159623_5end
EntrezGene:Cacna1h
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cacna1h

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F117.09
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C65.85
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G86.18
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G111.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.01e-1223
neuroblast (sensu Vertebrata)3.01e-1223
neuron of cerebral cortex1.38e-086
neuron6.81e-0733
neuronal stem cell6.81e-0733
neuroblast6.81e-0733
electrically signaling cell6.81e-0733

Uber anatomy
Ontology termp-valuen
gray matter5.79e-1534
brain grey matter8.61e-1429
regional part of telencephalon8.61e-1429
telencephalon8.61e-1429
pre-chordal neural plate6.20e-1349
regional part of forebrain2.10e-1139
forebrain2.10e-1139
future forebrain2.10e-1139
anterior neural tube6.28e-1140
neurectoderm1.81e-1064
neural plate1.81e-1064
presumptive neural plate1.81e-1064
cerebral cortex1.08e-0921
cerebral hemisphere1.08e-0921
pallium1.08e-0921
regional part of nervous system1.53e-0954
neural tube1.91e-0952
neural rod1.91e-0952
future spinal cord1.91e-0952
neural keel1.91e-0952
brain2.56e-0947
future brain2.56e-0947
structure with developmental contribution from neural crest3.98e-0992
regional part of brain1.54e-0846
central nervous system5.26e-0873
ecto-epithelium5.30e-0873
nervous system1.51e-0775
ectoderm-derived structure4.06e-0795
ectoderm4.06e-0795
presumptive ectoderm4.06e-0795
corpus striatum4.87e-075
striatum4.87e-075
ventral part of telencephalon4.87e-075
future corpus striatum4.87e-075







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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