Personal tools

FFCP PHASE1:Mm9::chr6:53989584..53989599,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr6:53989584..53989599,+
|id=chr6:53989584..53989599,+
|ontology_enrichment_celltype=CL:0000117!1.24e-07!23;CL:0000337!1.24e-07!23
|ontology_enrichment_celltype=CL:0000117!1.24e-07!23;CL:0000337!1.24e-07!23
|ontology_enrichment_celltype_v019_2=CL:0002613,4.88e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.93e-11!63;UBERON:0003056!3.24e-11!49;UBERON:0002020!4.03e-11!34;UBERON:0000955!1.37e-10!50;UBERON:0006238!1.37e-10!50;UBERON:0001049!1.42e-10!52;UBERON:0005068!1.42e-10!52;UBERON:0006241!1.42e-10!52;UBERON:0007135!1.42e-10!52;UBERON:0002346!2.06e-10!71;UBERON:0003075!2.06e-10!71;UBERON:0007284!2.06e-10!71;UBERON:0002791!3.33e-10!29;UBERON:0003528!3.33e-10!29;UBERON:0001893!3.33e-10!29;UBERON:0002616!3.68e-10!49;UBERON:0003080!8.39e-10!40;UBERON:0002780!1.04e-09!39;UBERON:0001890!1.04e-09!39;UBERON:0006240!1.04e-09!39;UBERON:0004121!2.93e-08!102;UBERON:0000924!2.93e-08!102;UBERON:0006601!2.93e-08!102;UBERON:0004111!1.47e-07!122;UBERON:0001017!3.03e-07!73;UBERON:0005743!3.03e-07!73;UBERON:0000073!5.07e-07!75;UBERON:0001016!5.07e-07!75
|ontology_enrichment_uberon=UBERON:0000033!2.93e-11!63;UBERON:0003056!3.24e-11!49;UBERON:0002020!4.03e-11!34;UBERON:0000955!1.37e-10!50;UBERON:0006238!1.37e-10!50;UBERON:0001049!1.42e-10!52;UBERON:0005068!1.42e-10!52;UBERON:0006241!1.42e-10!52;UBERON:0007135!1.42e-10!52;UBERON:0002346!2.06e-10!71;UBERON:0003075!2.06e-10!71;UBERON:0007284!2.06e-10!71;UBERON:0002791!3.33e-10!29;UBERON:0003528!3.33e-10!29;UBERON:0001893!3.33e-10!29;UBERON:0002616!3.68e-10!49;UBERON:0003080!8.39e-10!40;UBERON:0002780!1.04e-09!39;UBERON:0001890!1.04e-09!39;UBERON:0006240!1.04e-09!39;UBERON:0004121!2.93e-08!102;UBERON:0000924!2.93e-08!102;UBERON:0006601!2.93e-08!102;UBERON:0004111!1.47e-07!122;UBERON:0001017!3.03e-07!73;UBERON:0005743!3.03e-07!73;UBERON:0000073!5.07e-07!75;UBERON:0001016!5.07e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.16e-14,5;UBERON:0002435,1.16e-14,5;UBERON:0000204,1.16e-14,5;UBERON:0010082,1.16e-14,5;UBERON:0002420,3.82e-14,8;UBERON:0007245,3.82e-14,8;UBERON:0010009,3.82e-14,8;UBERON:0010011,3.82e-14,8;UBERON:0000454,3.82e-14,8;UBERON:0003528,2.10e-11,29;UBERON:0002791,2.10e-11,29;UBERON:0001893,2.10e-11,29;UBERON:0002616,2.32e-10,46;UBERON:0000955,4.20e-10,47;UBERON:0006238,4.20e-10,47;UBERON:0002346,6.57e-10,64;UBERON:0003075,6.57e-10,64;UBERON:0007284,6.57e-10,64;UBERON:0010371,6.62e-10,73;UBERON:0010147,7.78e-10,2;UBERON:0003937,7.78e-10,2;UBERON:0005399,7.78e-10,2;UBERON:0002020,1.55e-09,34;UBERON:0003056,2.25e-09,49;UBERON:0001049,5.83e-09,52;UBERON:0005068,5.83e-09,52;UBERON:0006241,5.83e-09,52;UBERON:0007135,5.83e-09,52;UBERON:0000073,1.46e-08,54;UBERON:0002780,3.79e-08,39;UBERON:0001890,3.79e-08,39;UBERON:0006240,3.79e-08,39;UBERON:0003080,6.53e-08,40;UBERON:0004121,4.60e-07,95;UBERON:0000924,4.60e-07,95;UBERON:0006601,4.60e-07,95
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.765389611359628,0.0992909512008853,0.522399578277871,0,0,0,0,0.646413698057667,0,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.540023753326763,1.26194976810829,0.285650984403804,0.220868540951614,0.61245399607477,0.670918297127655,2.75765635983006,0,0.510749352340751,0.46081959976873,0.659431438650969,1.28082701043374,2.08365348222704,3.62937898701795,0.56276261003168,0.15279824777681,0.589257170947335,0.569486723196412,0.372798891650601,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0,0,0,15.2246014446005,17.1746299587033,0.255457055208591,0.11981512450592,0,0.127070227073065,0.299581278809645,1.83000241127451,1.13088916901578,0.173824320192276,1.02286182932132,0.20778804455956,0.162241263067758,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,1.26043490863744,0.150704817835715,1.08858398642125,0.640568601424249,0.843315521037559,0.517406741478031,0.431135985865684,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,0.61734640922383,0.796137067273973,0,0,0,0.414251545071004,0,0.36012412292203,0.23674473558521,0,0.308534225774757,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0,0,0,0,0.420579897128254,0.823236899034275,0.330418782983798,0.264450566663544,0,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.771494018793504,0.505892296994058,0.442830443938806,0.470996183524124,0.370191491765402,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0,0,0.486405680325106,0.274561413188081,0,0.744281895337007,0,1.01031551178845,0.179397413521912,0.482443521363367,0.184753190166605,0.568474235311454,0,0.678980343100753,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.655453258862952,0.172684981865896,0.289298117163023,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0.36012218806262,0.388076051348264,0,0.354680467284547,0.356737635204141,0.658196082408484,0.304464949114599,0.23467170806371,0.63549621259146,5.07215315526412,0.49465875882444,0.161464426695906,0.542816324353403,0.596861720015682,1.14898629821543,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0.414599921413271,1.90934123603023,0,0.203319467126849,0.432021363287205,0.209088296014469,0.87345025498471,0.134864346384821,0.743881101528023,0,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0.209718688851422,0,0,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.194915761479505,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0.73260649706906,0.857473516316263,1.00314420807073,1.6942555278512,0.460325236507177,1.14579102687879,0.859265911718438,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0.209613162627982,0,0.666740183404846,0,0.64183841918363,0.252697211763798,0.25347929989024,0,0.187283014939765,0.448176066834085,0.459483751644906,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.715308569841963,0.290692833264657,0.564656282491984,0.25384382367503,0.365855945745545,0.526139422875686,0.407412341537585,0,0.474540072496697,0.29551344712669,0,0.464810523557898,0,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.765389611359628,0.0992909512008853,0.522399578277871,0,0,0,0,0.646413698057667,0,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.540023753326763,1.26194976810829,0.285650984403804,0.220868540951614,0.61245399607477,0.670918297127655,2.75765635983006,0,0.510749352340751,0.46081959976873,0.659431438650969,1.28082701043374,2.08365348222704,3.62937898701795,0.56276261003168,0.15279824777681,0.589257170947335,0.569486723196412,0.372798891650601,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0,0,0,15.2246014446005,17.1746299587033,0.255457055208591,0.11981512450592,0,0.127070227073065,0.299581278809645,1.83000241127451,1.13088916901578,0.173824320192276,1.02286182932132,0.20778804455956,0.162241263067758,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,1.26043490863744,0.150704817835715,1.08858398642125,0.640568601424249,0.843315521037559,0.517406741478031,0.431135985865684,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,0.61734640922383,0.796137067273973,0,0,0,0.414251545071004,0,0.36012412292203,0.23674473558521,0,0.308534225774757,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0,0,0,0,0.420579897128254,0.823236899034275,0.330418782983798,0.264450566663544,0,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.771494018793504,0.505892296994058,0.442830443938806,0.470996183524124,0.370191491765402,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0,0,0.486405680325106,0.274561413188081,0,0.744281895337007,0,1.01031551178845,0.179397413521912,0.482443521363367,0.184753190166605,0.568474235311454,0,0.678980343100753,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.655453258862952,0.172684981865896,0.289298117163023,0,0,0,0,0.481651769963376,0.234423373184406,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0.36012218806262,0.388076051348264,0,0.354680467284547,0.356737635204141,0.658196082408484,0.304464949114599,0.23467170806371,0.63549621259146,5.07215315526412,0.49465875882444,0.161464426695906,0.542816324353403,0.596861720015682,1.14898629821543,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0.414599921413271,1.90934123603023,0,0.203319467126849,0.432021363287205,0.209088296014469,0.87345025498471,0.134864346384821,0.743881101528023,0,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0.209718688851422,0,0,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.194915761479505,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0.73260649706906,0.857473516316263,1.00314420807073,1.6942555278512,0.460325236507177,1.14579102687879,0.859265911718438,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0.209613162627982,0,0.666740183404846,0,0.64183841918363,0.252697211763798,0.25347929989024,0,0.187283014939765,0.448176066834085,0.459483751644906,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.715308569841963,0.290692833264657,0.564656282491984,0.25384382367503,0.365855945745545,0.526139422875686,0.407412341537585,0,0.474540072496697,0.29551344712669,0,0.464810523557898,0,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421
|short_description=p12@Chn2
|short_description=p12@Chn2
}}
}}

Revision as of 18:55, 13 November 2012

Short description:p12@Chn2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_12_at_Chn2_5end
Coexpression cluster:MCL_coexpression_mm9:30
Association with transcript: -7bp_to_ENSMUST00000133315_5end
EntrezGene:Chn2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p12@Chn2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I217.17
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
striatum neuron4.88e-073

Uber anatomy
Ontology termp-valuen
corpus striatum1.16e-145
striatum1.16e-145
ventral part of telencephalon1.16e-145
future corpus striatum1.16e-145
basal ganglion3.82e-148
nuclear complex of neuraxis3.82e-148
aggregate regional part of brain3.82e-148
collection of basal ganglia3.82e-148
cerebral subcortex3.82e-148
brain grey matter2.10e-1129
regional part of telencephalon2.10e-1129
telencephalon2.10e-1129
regional part of brain2.32e-1046
brain4.20e-1047
future brain4.20e-1047
neurectoderm6.57e-1064
neural plate6.57e-1064
presumptive neural plate6.57e-1064
ecto-epithelium6.62e-1073
male accessory sex gland7.78e-102
sex gland7.78e-102
male reproductive gland7.78e-102
gray matter1.55e-0934
pre-chordal neural plate2.25e-0949
neural tube5.83e-0952
neural rod5.83e-0952
future spinal cord5.83e-0952
neural keel5.83e-0952
regional part of nervous system1.46e-0854
regional part of forebrain3.79e-0839
forebrain3.79e-0839
future forebrain3.79e-0839
anterior neural tube6.53e-0840
ectoderm-derived structure4.60e-0795
ectoderm4.60e-0795
presumptive ectoderm4.60e-0795







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:53989584..53989599,%2B&oldid=2271923"