FFCP PHASE1:Mm9::chr8:108674259..108674317,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr8:108674259..108674317,+ | |id=chr8:108674259..108674317,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!9.82e-11!50;UBERON:0006238!9.82e-11!50;UBERON:0002616!1.22e-10!49;UBERON:0001017!2.31e-10!73;UBERON:0005743!2.31e-10!73;UBERON:0001049!3.14e-10!52;UBERON:0005068!3.14e-10!52;UBERON:0006241!3.14e-10!52;UBERON:0007135!3.14e-10!52;UBERON:0003080!3.49e-10!40;UBERON:0000025!4.95e-10!114;UBERON:0002780!5.74e-10!39;UBERON:0001890!5.74e-10!39;UBERON:0006240!5.74e-10!39;UBERON:0004111!9.02e-10!122;UBERON:0000073!2.07e-09!75;UBERON:0001016!2.07e-09!75;UBERON:0004121!3.36e-08!102;UBERON:0000924!3.36e-08!102;UBERON:0006601!3.36e-08!102;UBERON:0000033!6.13e-08!63;UBERON:0002020!1.12e-07!34;UBERON:0002204!1.23e-07!32;UBERON:0002791!1.57e-07!29;UBERON:0003528!1.57e-07!29;UBERON:0001893!1.57e-07!29;UBERON:0003056!1.98e-07!49 | |ontology_enrichment_uberon=UBERON:0000955!9.82e-11!50;UBERON:0006238!9.82e-11!50;UBERON:0002616!1.22e-10!49;UBERON:0001017!2.31e-10!73;UBERON:0005743!2.31e-10!73;UBERON:0001049!3.14e-10!52;UBERON:0005068!3.14e-10!52;UBERON:0006241!3.14e-10!52;UBERON:0007135!3.14e-10!52;UBERON:0003080!3.49e-10!40;UBERON:0000025!4.95e-10!114;UBERON:0002780!5.74e-10!39;UBERON:0001890!5.74e-10!39;UBERON:0006240!5.74e-10!39;UBERON:0004111!9.02e-10!122;UBERON:0000073!2.07e-09!75;UBERON:0001016!2.07e-09!75;UBERON:0004121!3.36e-08!102;UBERON:0000924!3.36e-08!102;UBERON:0006601!3.36e-08!102;UBERON:0000033!6.13e-08!63;UBERON:0002020!1.12e-07!34;UBERON:0002204!1.23e-07!32;UBERON:0002791!1.57e-07!29;UBERON:0003528!1.57e-07!29;UBERON:0001893!1.57e-07!29;UBERON:0003056!1.98e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.82e-11,54;UBERON:0001017,2.31e-10,73;UBERON:0001049,3.13e-10,52;UBERON:0005068,3.13e-10,52;UBERON:0006241,3.13e-10,52;UBERON:0007135,3.13e-10,52;UBERON:0003080,3.49e-10,40;UBERON:0000955,3.66e-10,47;UBERON:0006238,3.66e-10,47;UBERON:0002616,4.52e-10,46;UBERON:0000025,4.95e-10,114;UBERON:0002780,5.74e-10,39;UBERON:0001890,5.74e-10,39;UBERON:0006240,5.74e-10,39;UBERON:0004111,9.01e-10,122;UBERON:0001016,2.07e-09,75;UBERON:0004121,2.20e-08,95;UBERON:0000924,2.20e-08,95;UBERON:0006601,2.20e-08,95;UBERON:0002020,1.12e-07,34;UBERON:0002204,1.23e-07,32;UBERON:0003528,1.57e-07,29;UBERON:0002791,1.57e-07,29;UBERON:0001893,1.57e-07,29;UBERON:0003056,1.98e-07,49;UBERON:0002346,6.61e-07,64;UBERON:0003075,6.61e-07,64;UBERON:0007284,6.61e-07,64 | |||
|phase1_expression=8.48788889655408,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,2.68606835059024,1.63528848416868,4.51931632045517,2.53419699873,2.34064526321993,2.91070545983358,3.82906363177615,3.59521532855532,3.4093956943409,15.3230490435205,18.0202987976945,13.9912375625629,14.3535285237998,16.4537320326887,15.7024171165271,10.2051948181284,21.0496816545877,19.5899841854202,3.19984845586813,1.83527424853736,0,0,1.07735616342945,2.09025761402011,1.51218077855958,2.21730510655305,7.62036808151557,10.4561013889377,15.8481681015439,2.59966457776147,4.15586613396231,3.06254034393554,10.0447591376858,11.720030167857,9.94695113550217,9.99993529652724,12.294818729252,16.9928623560904,32.6072758556745,28.182786879025,40.7473789798933,52.4202200713186,8.93903141159831,19.552070263368,16.1376816231655,24.9175830493145,14.3752564364972,7.04686945442493,2.90144856804538,3.02484419228218,19.294457702696,27.2206767941819,30.9403255366465,14.3644687210314,18.5146842745212,15.2119536841483,32.8679196107058,31.1253178638899,346.011441294698,499.377513096322,385.790702415732,148.30205470661,99.1283227729611,9.43575472007147,10.6654691282036,9.88527318351495,11.7116903605559,13.693849539,9.67677313798137,10.543001812006,14.7075005857603,14.3150645299205,15.8332299225633,12.9029487935245,15.9582408153535,16.6507511356386,14.0646610050325,15.0758819460746,24.1987922313622,17.4190002465564,11.490514833473,9.681274294339,13.2343606535963,4.54357159999104,7.40601289046498,7.8263411949453,9.46466264679525,8.15965600449301,15.6513925574967,22.7421746106684,14.7848872742121,14.4657752735704,28.1210032253795,30.3949625385356,30.3872034078893,7.74638808771743,17.9657068380045,2.54805239706646,0,4.5463118612355,4.30711771307668,4.04419556011827,7.07940054258172,29.0010429684832,25.383605780085,8.15381035800839,9.43842982767638,8.53277339847416,9.64624899536784,7.76085467095652,16.8393232381765,23.2363269670311,27.907675885543,17.6922110389975,8.8971767471075,9.49618529379692,9.69750506270444,5.59175283654366,12.296793474485,8.58731497935166,4.34276993854605,9.22576458695586,11.3981518888747,10.8009693012105,14.9790639404823,22.4175295381127,12.8167439155122,16.6871347384585,16.1100738118108,15.1685272528479,15.5751612545047,11.7115268427864,14.3068016201607,11.1198013710817,11.7847439296425,10.0192741081282,6.89706313300419,8.10279584124071,8.43946979880004,7.21186891004075,8.96796041993949,8.99536555773397,7.76110112217047,7.97601573851516,12.6701073712439,11.6127741948206,13.3709396780821,11.1218899690239,7.3132954969655,10.906453229621,10.3497818745616,7.72434506044558,15.6982223339976,13.3556844715929,7.45652781127807,6.80125573945179,5.76198596675248,8.75955521665278,5.3126342571799,7.0962871928194,6.27841650826101,5.09719462659276,4.90414437942112,5.9241545968853,6.7308660272429,7.86367452594801,8.91819923294527,9.66020507280623,11.0049263383505,16.4026159880019,11.1136981369627,1.32167513193519,3.70230793328962,8.31824177087412,8.82499353069666,10.1805294444454,7.05892336181699,5.55945109612176,6.65789691393957,4.74529061544512,6.91735609840846,11.0587491872119,7.95825888164603,7.60359939764569,2.69645822596266,4.75503709724327,5.77509692437665,8.91439134479484,8.68288695833939,10.1436962105772,5.90588850751411,7.17624202520215,4.97964321221262,6.13394410105296,7.0852871030209,7.53593893638599,6.29325536001183,21.3445891502747,5.83957870006329,6.87956482896211,6.07127703439105,9.12870546248263,9.40590923034426,12.2220408855082,12.3709339103849,9.89024883327716,12.3552635934637,21.5652309791032,20.4677521217677,19.0342980599882,17.9331003342449,14.7105879087968,14.9557491622644,28.6367444758237,8.7166049414423,5.70377417547091,6.45031325945715,9.38760993154008,8.04030035720716,9.52174563544055,8.58588050574315,12.4531763843891,11.7376285513851,17.6994793209811,21.1383675983302,22.9671025881641,21.8420078458082,153.807109618058,102.798174241736,44.2587845717133,16.2802680319792,11.8807436590966,9.84578167374507,16.2295595922909,9.84636616097055,6.31016438832513,6.24701990874622,9.47862950024315,10.7535959078648,6.23836287430704,8.77537245445381,10.5250782435473,6.72188473196017,8.69633111482352,12.2102100240287,23.7039942297809,16.3820355373875,9.77321756121457,19.9613848796768,2.65490276679926,10.6823479908192,8.76738315197778,5.65815239267694,10.6308681437078,6.7635732547664,6.20227903603731,11.9966130727577,9.62542921638748,6.0046984007805,9.48767477174989,7.21948802737308,25.1925308257803,11.1637878299412,15.0056073187995,14.1462443120851,12.0591358876746,17.658512942605,16.1258040190079,20.3991515906782,9.85621173867584,25.2080164327946,7.71849393192367,10.3878339353132,8.55761461488299,10.072258463002,10.6241386162791,7.87876318776294,6.41257840585672,10.0129663085675,26.655857404465,20.0195261924326,9.63011542322501,12.9974235333237,14.3528939107076,20.3612574153805,10.3686842296252,7.69732987780119,8.7065983496787,8.59203556213602,9.80641580101519,10.1659733563424,7.23635783506068,8.57262013659322,8.07941485860857,8.22672512947406,8.59595939543494,9.94672579539312,18.79417112731,30.4456263412594,1.12738587736838,8.37292657846281,11.2511773510826,10.1114617938905,10.4619457016962,8.10989402355735,7.04143431874524,8.33308063001281,9.75191903159111,4.59009829569411,5.18454011264158,13.9044893076398,10.3389859797984,7.60061083019722,7.40548690973432,7.16106782669926,5.96044064343795,7.81270421879797,8.4183030489509,6.66378569657774,6.17275133905499,9.27600903258933,8.47883562435846,9.90981968895393,10.6357980985228,9.52267611183888,13.763129109192,7.89481938163386,10.9125000636651,17.1938738688649,20.64507229963,17.2162526811229,6.64541975145104,14.0440189129902,18.6368108063632,17.4923589872727,17.7597609166213,18.0445841460872,16.4419804744954,14.3524840504043,20.925697507186,19.3638117386415,17.2194115413998,18.1216109113137,3.42498247027783,9.57659696162474,9.56108192223151,8.50873509739029,4.40187641518763,6.06683577885047,8.88986911206461,9.88968274746692,8.3438994493872,8.08631077644152,10.1391719956096,9.99719609346204,8.98958471710871,8.70742072706222,8.6727558122976,9.52587382566147,9.03897742369873,8.68091492086673,9.47797571847605,9.71512872887022,6.17164654293748,9.9386451449229,6.19934093863034,9.88355633099834,8.65806299821042,9.47683608386777,8.59761472502031,10.2597187460759,8.41985505844343,8.41713407486608,9.96534152243063,8.27437651954733,7.36615877705441,8.36658942404216,10.2240503820005,15.9878769880285,11.2287172053796,9.02458427002853,11.6685882561994,13.67666798541,15.5351449865682 | |phase1_expression=8.48788889655408,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,2.68606835059024,1.63528848416868,4.51931632045517,2.53419699873,2.34064526321993,2.91070545983358,3.82906363177615,3.59521532855532,3.4093956943409,15.3230490435205,18.0202987976945,13.9912375625629,14.3535285237998,16.4537320326887,15.7024171165271,10.2051948181284,21.0496816545877,19.5899841854202,3.19984845586813,1.83527424853736,0,0,1.07735616342945,2.09025761402011,1.51218077855958,2.21730510655305,7.62036808151557,10.4561013889377,15.8481681015439,2.59966457776147,4.15586613396231,3.06254034393554,10.0447591376858,11.720030167857,9.94695113550217,9.99993529652724,12.294818729252,16.9928623560904,32.6072758556745,28.182786879025,40.7473789798933,52.4202200713186,8.93903141159831,19.552070263368,16.1376816231655,24.9175830493145,14.3752564364972,7.04686945442493,2.90144856804538,3.02484419228218,19.294457702696,27.2206767941819,30.9403255366465,14.3644687210314,18.5146842745212,15.2119536841483,32.8679196107058,31.1253178638899,346.011441294698,499.377513096322,385.790702415732,148.30205470661,99.1283227729611,9.43575472007147,10.6654691282036,9.88527318351495,11.7116903605559,13.693849539,9.67677313798137,10.543001812006,14.7075005857603,14.3150645299205,15.8332299225633,12.9029487935245,15.9582408153535,16.6507511356386,14.0646610050325,15.0758819460746,24.1987922313622,17.4190002465564,11.490514833473,9.681274294339,13.2343606535963,4.54357159999104,7.40601289046498,7.8263411949453,9.46466264679525,8.15965600449301,15.6513925574967,22.7421746106684,14.7848872742121,14.4657752735704,28.1210032253795,30.3949625385356,30.3872034078893,7.74638808771743,17.9657068380045,2.54805239706646,0,4.5463118612355,4.30711771307668,4.04419556011827,7.07940054258172,29.0010429684832,25.383605780085,8.15381035800839,9.43842982767638,8.53277339847416,9.64624899536784,7.76085467095652,16.8393232381765,23.2363269670311,27.907675885543,17.6922110389975,8.8971767471075,9.49618529379692,9.69750506270444,5.59175283654366,12.296793474485,8.58731497935166,4.34276993854605,9.22576458695586,11.3981518888747,10.8009693012105,14.9790639404823,22.4175295381127,12.8167439155122,16.6871347384585,16.1100738118108,15.1685272528479,15.5751612545047,11.7115268427864,14.3068016201607,11.1198013710817,11.7847439296425,10.0192741081282,6.89706313300419,8.10279584124071,8.43946979880004,7.21186891004075,8.96796041993949,8.99536555773397,7.76110112217047,7.97601573851516,12.6701073712439,11.6127741948206,13.3709396780821,11.1218899690239,7.3132954969655,10.906453229621,10.3497818745616,7.72434506044558,15.6982223339976,13.3556844715929,7.45652781127807,6.80125573945179,5.76198596675248,8.75955521665278,5.3126342571799,7.0962871928194,6.27841650826101,5.09719462659276,4.90414437942112,5.9241545968853,6.7308660272429,7.86367452594801,8.91819923294527,9.66020507280623,11.0049263383505,16.4026159880019,11.1136981369627,1.32167513193519,3.70230793328962,8.31824177087412,8.82499353069666,10.1805294444454,7.05892336181699,5.55945109612176,6.65789691393957,4.74529061544512,6.91735609840846,11.0587491872119,7.95825888164603,7.60359939764569,2.69645822596266,4.75503709724327,5.77509692437665,8.91439134479484,8.68288695833939,10.1436962105772,5.90588850751411,7.17624202520215,4.97964321221262,6.13394410105296,7.0852871030209,7.53593893638599,6.29325536001183,21.3445891502747,5.83957870006329,6.87956482896211,6.07127703439105,9.12870546248263,9.40590923034426,12.2220408855082,12.3709339103849,9.89024883327716,12.3552635934637,21.5652309791032,20.4677521217677,19.0342980599882,17.9331003342449,14.7105879087968,14.9557491622644,28.6367444758237,8.7166049414423,5.70377417547091,6.45031325945715,9.38760993154008,8.04030035720716,9.52174563544055,8.58588050574315,12.4531763843891,11.7376285513851,17.6994793209811,21.1383675983302,22.9671025881641,21.8420078458082,153.807109618058,102.798174241736,44.2587845717133,16.2802680319792,11.8807436590966,9.84578167374507,16.2295595922909,9.84636616097055,6.31016438832513,6.24701990874622,9.47862950024315,10.7535959078648,6.23836287430704,8.77537245445381,10.5250782435473,6.72188473196017,8.69633111482352,12.2102100240287,23.7039942297809,16.3820355373875,9.77321756121457,19.9613848796768,2.65490276679926,10.6823479908192,8.76738315197778,5.65815239267694,10.6308681437078,6.7635732547664,6.20227903603731,11.9966130727577,9.62542921638748,6.0046984007805,9.48767477174989,7.21948802737308,25.1925308257803,11.1637878299412,15.0056073187995,14.1462443120851,12.0591358876746,17.658512942605,16.1258040190079,20.3991515906782,9.85621173867584,25.2080164327946,7.71849393192367,10.3878339353132,8.55761461488299,10.072258463002,10.6241386162791,7.87876318776294,6.41257840585672,10.0129663085675,26.655857404465,20.0195261924326,9.63011542322501,12.9974235333237,14.3528939107076,20.3612574153805,10.3686842296252,7.69732987780119,8.7065983496787,8.59203556213602,9.80641580101519,10.1659733563424,7.23635783506068,8.57262013659322,8.07941485860857,8.22672512947406,8.59595939543494,9.94672579539312,18.79417112731,30.4456263412594,1.12738587736838,8.37292657846281,11.2511773510826,10.1114617938905,10.4619457016962,8.10989402355735,7.04143431874524,8.33308063001281,9.75191903159111,4.59009829569411,5.18454011264158,13.9044893076398,10.3389859797984,7.60061083019722,7.40548690973432,7.16106782669926,5.96044064343795,7.81270421879797,8.4183030489509,6.66378569657774,6.17275133905499,9.27600903258933,8.47883562435846,9.90981968895393,10.6357980985228,9.52267611183888,13.763129109192,7.89481938163386,10.9125000636651,17.1938738688649,20.64507229963,17.2162526811229,6.64541975145104,14.0440189129902,18.6368108063632,17.4923589872727,17.7597609166213,18.0445841460872,16.4419804744954,14.3524840504043,20.925697507186,19.3638117386415,17.2194115413998,18.1216109113137,3.42498247027783,9.57659696162474,9.56108192223151,8.50873509739029,4.40187641518763,6.06683577885047,8.88986911206461,9.88968274746692,8.3438994493872,8.08631077644152,10.1391719956096,9.99719609346204,8.98958471710871,8.70742072706222,8.6727558122976,9.52587382566147,9.03897742369873,8.68091492086673,9.47797571847605,9.71512872887022,6.17164654293748,9.9386451449229,6.19934093863034,9.88355633099834,8.65806299821042,9.47683608386777,8.59761472502031,10.2597187460759,8.41985505844343,8.41713407486608,9.96534152243063,8.27437651954733,7.36615877705441,8.36658942404216,10.2240503820005,15.9878769880285,11.2287172053796,9.02458427002853,11.6685882561994,13.67666798541,15.5351449865682 | ||
|short_description=p1@Pla2g15 | |short_description=p1@Pla2g15 | ||
}} | }} |
Revision as of 23:59, 13 November 2012
Short description: | p1@Pla2g15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pla2g15_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 0bp_to_ENSMUST00000034377, NM_133792, uc009nfi.1, uc009nfj.1, uc009nfk.1_5end |
EntrezGene: | Pla2g15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.82e-11 | 54 |
central nervous system | 2.31e-10 | 73 |
neural tube | 3.13e-10 | 52 |
neural rod | 3.13e-10 | 52 |
future spinal cord | 3.13e-10 | 52 |
neural keel | 3.13e-10 | 52 |
anterior neural tube | 3.49e-10 | 40 |
brain | 3.66e-10 | 47 |
future brain | 3.66e-10 | 47 |
regional part of brain | 4.52e-10 | 46 |
tube | 4.95e-10 | 114 |
regional part of forebrain | 5.74e-10 | 39 |
forebrain | 5.74e-10 | 39 |
future forebrain | 5.74e-10 | 39 |
anatomical conduit | 9.01e-10 | 122 |
nervous system | 2.07e-09 | 75 |
ectoderm-derived structure | 2.20e-08 | 95 |
ectoderm | 2.20e-08 | 95 |
presumptive ectoderm | 2.20e-08 | 95 |
gray matter | 1.12e-07 | 34 |
musculoskeletal system | 1.23e-07 | 32 |
brain grey matter | 1.57e-07 | 29 |
regional part of telencephalon | 1.57e-07 | 29 |
telencephalon | 1.57e-07 | 29 |
pre-chordal neural plate | 1.98e-07 | 49 |
neurectoderm | 6.61e-07 | 64 |
neural plate | 6.61e-07 | 64 |
presumptive neural plate | 6.61e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.