FFCP PHASE1:Mm9::chr9:108004261..108004265,-: Difference between revisions
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|id=chr9:108004261..108004265,- | |id=chr9:108004261..108004265,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!4.71e-13!86;UBERON:0000033!4.17e-12!63;UBERON:0000153!9.44e-12!94;UBERON:0003056!3.85e-11!49;UBERON:0002346!7.93e-10!71;UBERON:0003075!7.93e-10!71;UBERON:0007284!7.93e-10!71;UBERON:0002021!9.54e-10!10;UBERON:0000411!9.54e-10!10;UBERON:0001950!9.54e-10!10;UBERON:0001049!1.90e-09!52;UBERON:0005068!1.90e-09!52;UBERON:0006241!1.90e-09!52;UBERON:0007135!1.90e-09!52;UBERON:0000956!2.01e-09!21;UBERON:0001869!2.01e-09!21;UBERON:0000203!2.01e-09!21;UBERON:0000955!5.79e-09!50;UBERON:0006238!5.79e-09!50;UBERON:0002619!9.20e-09!17;UBERON:0002616!2.35e-08!49;UBERON:0003080!2.71e-08!40;UBERON:0002020!8.02e-08!34;UBERON:0002780!8.48e-08!39;UBERON:0001890!8.48e-08!39;UBERON:0006240!8.48e-08!39;UBERON:0002791!1.62e-07!29;UBERON:0003528!1.62e-07!29;UBERON:0001893!1.62e-07!29 | |ontology_enrichment_uberon=UBERON:0007811!4.71e-13!86;UBERON:0000033!4.17e-12!63;UBERON:0000153!9.44e-12!94;UBERON:0003056!3.85e-11!49;UBERON:0002346!7.93e-10!71;UBERON:0003075!7.93e-10!71;UBERON:0007284!7.93e-10!71;UBERON:0002021!9.54e-10!10;UBERON:0000411!9.54e-10!10;UBERON:0001950!9.54e-10!10;UBERON:0001049!1.90e-09!52;UBERON:0005068!1.90e-09!52;UBERON:0006241!1.90e-09!52;UBERON:0007135!1.90e-09!52;UBERON:0000956!2.01e-09!21;UBERON:0001869!2.01e-09!21;UBERON:0000203!2.01e-09!21;UBERON:0000955!5.79e-09!50;UBERON:0006238!5.79e-09!50;UBERON:0002619!9.20e-09!17;UBERON:0002616!2.35e-08!49;UBERON:0003080!2.71e-08!40;UBERON:0002020!8.02e-08!34;UBERON:0002780!8.48e-08!39;UBERON:0001890!8.48e-08!39;UBERON:0006240!8.48e-08!39;UBERON:0002791!1.62e-07!29;UBERON:0003528!1.62e-07!29;UBERON:0001893!1.62e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.59e-19,10;UBERON:0000411,4.59e-19,10;UBERON:0001950,4.59e-19,10;UBERON:0000955,3.71e-12,47;UBERON:0006238,3.71e-12,47;UBERON:0000956,7.90e-12,21;UBERON:0001869,7.90e-12,21;UBERON:0000203,7.90e-12,21;UBERON:0002619,4.69e-11,17;UBERON:0002616,2.83e-10,46;UBERON:0002346,3.09e-10,64;UBERON:0003075,3.09e-10,64;UBERON:0007284,3.09e-10,64;UBERON:0003056,2.33e-09,49;UBERON:0001049,6.28e-09,52;UBERON:0005068,6.28e-09,52;UBERON:0006241,6.28e-09,52;UBERON:0007135,6.28e-09,52;UBERON:0004121,6.83e-09,95;UBERON:0000924,6.83e-09,95;UBERON:0006601,6.83e-09,95;UBERON:0010371,9.30e-09,73;UBERON:0001017,1.00e-08,73;UBERON:0000073,1.52e-08,54;UBERON:0001016,1.91e-08,75;UBERON:0003528,2.25e-08,29;UBERON:0002791,2.25e-08,29;UBERON:0001893,2.25e-08,29;UBERON:0002780,9.26e-08,39;UBERON:0001890,9.26e-08,39;UBERON:0006240,9.26e-08,39;UBERON:0003080,1.53e-07,40;UBERON:0002020,4.91e-07,34 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.695036658406197,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,0,0.263772575460388,0.0914876436024097,0,0,0,0,0,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.485300549842228,1.54589062922275,0,0,3.51336956413857,2.93225389538837,0,0,0,0,0.449371918214468,0,0.502617408451458,1.39059456153821,1.79000820131231,0.62336413367868,0.162241263067758,0,0,0,0.841767423545896,0.130120442962704,0,0,0.30140963567143,0.544291993210623,1.0249097622788,0.749613796477831,1.55222022443409,0,0.189106080167819,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.92614151141356,0,0,0,0,0.257734922644187,0.605050573870028,0.889512175379481,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,1.50791283939272,0.54390568381871,0,0,0,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.28528526568723,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0.874442509889552,0.18542530201051,0.170870880797853,0,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0,0.269728692769641,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0.389762468933385,0,0.79472541912506,0,0.147689527174577,0.302899349844443,0.762068066549998,0.403304740547362,0.194915761479505,0.288635524920988,0.233753804363138,0.453460767230423,0,0,0,0,0,0.183151624267265,0.643105137237198,0,2.25900737046827,1.84130094602871,1.71868654031819,3.95262319390481,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,1.55328093525546,0,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0,0,0,0.280924522409647,0,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0.581385666529314,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr9:108004261..108004265,- | |short_description=p@chr9:108004261..108004265,- | ||
}} | }} |
Revision as of 03:20, 14 November 2012
Short description: | p@chr9:108004261..108004265, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:108004261..108004265, - |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.59e-19 | 10 |
visual cortex | 4.59e-19 | 10 |
neocortex | 4.59e-19 | 10 |
brain | 3.71e-12 | 47 |
future brain | 3.71e-12 | 47 |
cerebral cortex | 7.90e-12 | 21 |
cerebral hemisphere | 7.90e-12 | 21 |
pallium | 7.90e-12 | 21 |
regional part of cerebral cortex | 4.69e-11 | 17 |
regional part of brain | 2.83e-10 | 46 |
neurectoderm | 3.09e-10 | 64 |
neural plate | 3.09e-10 | 64 |
presumptive neural plate | 3.09e-10 | 64 |
pre-chordal neural plate | 2.33e-09 | 49 |
neural tube | 6.28e-09 | 52 |
neural rod | 6.28e-09 | 52 |
future spinal cord | 6.28e-09 | 52 |
neural keel | 6.28e-09 | 52 |
ectoderm-derived structure | 6.83e-09 | 95 |
ectoderm | 6.83e-09 | 95 |
presumptive ectoderm | 6.83e-09 | 95 |
ecto-epithelium | 9.30e-09 | 73 |
central nervous system | 1.00e-08 | 73 |
regional part of nervous system | 1.52e-08 | 54 |
nervous system | 1.91e-08 | 75 |
brain grey matter | 2.25e-08 | 29 |
regional part of telencephalon | 2.25e-08 | 29 |
telencephalon | 2.25e-08 | 29 |
regional part of forebrain | 9.26e-08 | 39 |
forebrain | 9.26e-08 | 39 |
future forebrain | 9.26e-08 | 39 |
anterior neural tube | 1.53e-07 | 40 |
gray matter | 4.91e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.