FFCP PHASE1:Mm9::chrX:38754016..38754062,+: Difference between revisions
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|id=chrX:38754016..38754062,+ | |id=chrX:38754016..38754062,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.70e-08!33;CL:0000047!1.70e-08!33;CL:0000031!1.70e-08!33;CL:0000404!1.70e-08!33;CL:0000393!3.71e-08!39;CL:0000211!3.71e-08!39;CL:0000221!1.73e-07!44;CL:0000133!1.73e-07!44;CL:0002319!3.15e-07!43;CL:0000117!7.47e-07!23;CL:0000337!7.47e-07!23 | |ontology_enrichment_celltype=CL:0000540!1.70e-08!33;CL:0000047!1.70e-08!33;CL:0000031!1.70e-08!33;CL:0000404!1.70e-08!33;CL:0000393!3.71e-08!39;CL:0000211!3.71e-08!39;CL:0000221!1.73e-07!44;CL:0000133!1.73e-07!44;CL:0002319!3.15e-07!43;CL:0000117!7.47e-07!23;CL:0000337!7.47e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.02e-08,33;CL:0000047,1.02e-08,33;CL:0000031,1.02e-08,33;CL:0000404,1.02e-08,33;CL:0000393,1.58e-08,39;CL:0000211,1.58e-08,39;CL:0000221,2.42e-08,44;CL:0000133,2.42e-08,44;CL:0002319,4.83e-08,43;CL:0000117,3.74e-07,23;CL:0000337,3.74e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.24e-19!73;UBERON:0005743!2.24e-19!73;UBERON:0000073!4.45e-18!75;UBERON:0001016!4.45e-18!75;UBERON:0004121!1.77e-16!102;UBERON:0000924!1.77e-16!102;UBERON:0006601!1.77e-16!102;UBERON:0002346!8.50e-16!71;UBERON:0003075!8.50e-16!71;UBERON:0007284!8.50e-16!71;UBERON:0001049!1.81e-14!52;UBERON:0005068!1.81e-14!52;UBERON:0006241!1.81e-14!52;UBERON:0007135!1.81e-14!52;UBERON:0000955!6.46e-14!50;UBERON:0006238!6.46e-14!50;UBERON:0002020!1.66e-13!34;UBERON:0002616!2.46e-13!49;UBERON:0000033!2.60e-13!63;UBERON:0002791!2.42e-11!29;UBERON:0003528!2.42e-11!29;UBERON:0001893!2.42e-11!29;UBERON:0003080!3.04e-10!40;UBERON:0002780!9.83e-10!39;UBERON:0001890!9.83e-10!39;UBERON:0006240!9.83e-10!39;UBERON:0003056!1.60e-09!49;UBERON:0000956!3.43e-09!21;UBERON:0001869!3.43e-09!21;UBERON:0000203!3.43e-09!21;UBERON:0000475!1.26e-08!200;UBERON:0002619!1.99e-08!17;UBERON:0002021!6.34e-08!10;UBERON:0000411!6.34e-08!10;UBERON:0001950!6.34e-08!10;UBERON:0000025!9.34e-08!114;UBERON:0004111!2.05e-07!122;UBERON:0007811!5.13e-07!86 | |ontology_enrichment_uberon=UBERON:0001017!2.24e-19!73;UBERON:0005743!2.24e-19!73;UBERON:0000073!4.45e-18!75;UBERON:0001016!4.45e-18!75;UBERON:0004121!1.77e-16!102;UBERON:0000924!1.77e-16!102;UBERON:0006601!1.77e-16!102;UBERON:0002346!8.50e-16!71;UBERON:0003075!8.50e-16!71;UBERON:0007284!8.50e-16!71;UBERON:0001049!1.81e-14!52;UBERON:0005068!1.81e-14!52;UBERON:0006241!1.81e-14!52;UBERON:0007135!1.81e-14!52;UBERON:0000955!6.46e-14!50;UBERON:0006238!6.46e-14!50;UBERON:0002020!1.66e-13!34;UBERON:0002616!2.46e-13!49;UBERON:0000033!2.60e-13!63;UBERON:0002791!2.42e-11!29;UBERON:0003528!2.42e-11!29;UBERON:0001893!2.42e-11!29;UBERON:0003080!3.04e-10!40;UBERON:0002780!9.83e-10!39;UBERON:0001890!9.83e-10!39;UBERON:0006240!9.83e-10!39;UBERON:0003056!1.60e-09!49;UBERON:0000956!3.43e-09!21;UBERON:0001869!3.43e-09!21;UBERON:0000203!3.43e-09!21;UBERON:0000475!1.26e-08!200;UBERON:0002619!1.99e-08!17;UBERON:0002021!6.34e-08!10;UBERON:0000411!6.34e-08!10;UBERON:0001950!6.34e-08!10;UBERON:0000025!9.34e-08!114;UBERON:0004111!2.05e-07!122;UBERON:0007811!5.13e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.48e-20,73;UBERON:0001016,8.13e-19,75;UBERON:0000073,1.12e-15,54;UBERON:0004121,4.78e-15,95;UBERON:0000924,4.78e-15,95;UBERON:0006601,4.78e-15,95;UBERON:0002020,9.37e-15,34;UBERON:0001049,1.75e-14,52;UBERON:0005068,1.75e-14,52;UBERON:0006241,1.75e-14,52;UBERON:0007135,1.75e-14,52;UBERON:0002346,5.30e-14,64;UBERON:0003075,5.30e-14,64;UBERON:0007284,5.30e-14,64;UBERON:0010371,1.31e-12,73;UBERON:0003528,2.97e-12,29;UBERON:0002791,2.97e-12,29;UBERON:0001893,2.97e-12,29;UBERON:0000955,4.65e-12,47;UBERON:0006238,4.65e-12,47;UBERON:0002616,1.93e-11,46;UBERON:0000956,9.89e-10,21;UBERON:0001869,9.89e-10,21;UBERON:0000203,9.89e-10,21;UBERON:0003080,1.87e-09,40;UBERON:0002021,5.62e-09,10;UBERON:0000411,5.62e-09,10;UBERON:0001950,5.62e-09,10;UBERON:0002780,6.61e-09,39;UBERON:0001890,6.61e-09,39;UBERON:0006240,6.61e-09,39;UBERON:0002619,8.26e-09,17;UBERON:0010314,2.20e-08,92;UBERON:0003056,2.22e-08,49;UBERON:0000025,9.36e-07,114 | |||
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| ||
|short_description=p3@Gria3 | |short_description=p3@Gria3 | ||
}} | }} |
Revision as of 03:49, 14 November 2012
Short description: | p3@Gria3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gria3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000128197, uc009taj.1_5end |
EntrezGene: | Gria3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.02e-08 | 33 |
neuronal stem cell | 1.02e-08 | 33 |
neuroblast | 1.02e-08 | 33 |
electrically signaling cell | 1.02e-08 | 33 |
electrically responsive cell | 1.58e-08 | 39 |
electrically active cell | 1.58e-08 | 39 |
ectodermal cell | 2.42e-08 | 44 |
neurectodermal cell | 2.42e-08 | 44 |
neural cell | 4.83e-08 | 43 |
CNS neuron (sensu Vertebrata) | 3.74e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.74e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.48e-20 | 73 |
nervous system | 8.13e-19 | 75 |
regional part of nervous system | 1.12e-15 | 54 |
ectoderm-derived structure | 4.78e-15 | 95 |
ectoderm | 4.78e-15 | 95 |
presumptive ectoderm | 4.78e-15 | 95 |
gray matter | 9.37e-15 | 34 |
neural tube | 1.75e-14 | 52 |
neural rod | 1.75e-14 | 52 |
future spinal cord | 1.75e-14 | 52 |
neural keel | 1.75e-14 | 52 |
neurectoderm | 5.30e-14 | 64 |
neural plate | 5.30e-14 | 64 |
presumptive neural plate | 5.30e-14 | 64 |
ecto-epithelium | 1.31e-12 | 73 |
brain grey matter | 2.97e-12 | 29 |
regional part of telencephalon | 2.97e-12 | 29 |
telencephalon | 2.97e-12 | 29 |
brain | 4.65e-12 | 47 |
future brain | 4.65e-12 | 47 |
regional part of brain | 1.93e-11 | 46 |
cerebral cortex | 9.89e-10 | 21 |
cerebral hemisphere | 9.89e-10 | 21 |
pallium | 9.89e-10 | 21 |
anterior neural tube | 1.87e-09 | 40 |
occipital lobe | 5.62e-09 | 10 |
visual cortex | 5.62e-09 | 10 |
neocortex | 5.62e-09 | 10 |
regional part of forebrain | 6.61e-09 | 39 |
forebrain | 6.61e-09 | 39 |
future forebrain | 6.61e-09 | 39 |
regional part of cerebral cortex | 8.26e-09 | 17 |
structure with developmental contribution from neural crest | 2.20e-08 | 92 |
pre-chordal neural plate | 2.22e-08 | 49 |
tube | 9.36e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.