FFCP PHASE1:Mm9::chr5:37680151..37680172,+: Difference between revisions
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|id=chr5:37680151..37680172,+ | |id=chr5:37680151..37680172,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.40e-18!23;CL:0000337!5.40e-18!23;CL:0000540!1.18e-12!33;CL:0000047!1.18e-12!33;CL:0000031!1.18e-12!33;CL:0000404!1.18e-12!33;CL:0000393!1.59e-09!39;CL:0000211!1.59e-09!39;CL:0002319!7.25e-09!43;CL:0000221!1.71e-08!44;CL:0000133!1.71e-08!44;CL:0002609!1.54e-07!6 | |ontology_enrichment_celltype=CL:0000117!5.40e-18!23;CL:0000337!5.40e-18!23;CL:0000540!1.18e-12!33;CL:0000047!1.18e-12!33;CL:0000031!1.18e-12!33;CL:0000404!1.18e-12!33;CL:0000393!1.59e-09!39;CL:0000211!1.59e-09!39;CL:0002319!7.25e-09!43;CL:0000221!1.71e-08!44;CL:0000133!1.71e-08!44;CL:0002609!1.54e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.15e-24,23;CL:0000337,3.15e-24,23;CL:0000540,2.00e-16,33;CL:0000047,2.00e-16,33;CL:0000031,2.00e-16,33;CL:0000404,2.00e-16,33;CL:0002612,1.45e-15,3;CL:0000120,6.98e-15,3;CL:0000393,1.17e-13,39;CL:0000211,1.17e-13,39;CL:0002319,3.07e-12,43;CL:0000221,6.33e-12,44;CL:0000133,6.33e-12,44;CL:0002609,5.70e-08,6;CL:0002613,1.42e-07,3;CL:0002321,6.85e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.05e-20!71;UBERON:0003075!2.05e-20!71;UBERON:0007284!2.05e-20!71;UBERON:0004121!1.35e-17!102;UBERON:0000924!1.35e-17!102;UBERON:0006601!1.35e-17!102;UBERON:0001017!9.78e-17!73;UBERON:0005743!9.78e-17!73;UBERON:0001049!3.46e-16!52;UBERON:0005068!3.46e-16!52;UBERON:0006241!3.46e-16!52;UBERON:0007135!3.46e-16!52;UBERON:0000073!6.62e-16!75;UBERON:0001016!6.62e-16!75;UBERON:0000033!3.60e-15!63;UBERON:0003056!2.71e-14!49;UBERON:0000955!1.11e-12!50;UBERON:0006238!1.11e-12!50;UBERON:0002020!1.19e-12!34;UBERON:0002616!6.92e-12!49;UBERON:0003080!4.39e-10!40;UBERON:0002780!9.91e-10!39;UBERON:0001890!9.91e-10!39;UBERON:0006240!9.91e-10!39;UBERON:0002791!1.49e-08!29;UBERON:0003528!1.49e-08!29;UBERON:0001893!1.49e-08!29;UBERON:0007811!1.73e-08!86;UBERON:0003076!1.55e-07!12;UBERON:0003057!1.55e-07!12;UBERON:0000153!2.25e-07!94;UBERON:0002240!3.87e-07!6;UBERON:0005174!3.87e-07!6;UBERON:0001137!3.87e-07!6 | |ontology_enrichment_uberon=UBERON:0002346!2.05e-20!71;UBERON:0003075!2.05e-20!71;UBERON:0007284!2.05e-20!71;UBERON:0004121!1.35e-17!102;UBERON:0000924!1.35e-17!102;UBERON:0006601!1.35e-17!102;UBERON:0001017!9.78e-17!73;UBERON:0005743!9.78e-17!73;UBERON:0001049!3.46e-16!52;UBERON:0005068!3.46e-16!52;UBERON:0006241!3.46e-16!52;UBERON:0007135!3.46e-16!52;UBERON:0000073!6.62e-16!75;UBERON:0001016!6.62e-16!75;UBERON:0000033!3.60e-15!63;UBERON:0003056!2.71e-14!49;UBERON:0000955!1.11e-12!50;UBERON:0006238!1.11e-12!50;UBERON:0002020!1.19e-12!34;UBERON:0002616!6.92e-12!49;UBERON:0003080!4.39e-10!40;UBERON:0002780!9.91e-10!39;UBERON:0001890!9.91e-10!39;UBERON:0006240!9.91e-10!39;UBERON:0002791!1.49e-08!29;UBERON:0003528!1.49e-08!29;UBERON:0001893!1.49e-08!29;UBERON:0007811!1.73e-08!86;UBERON:0003076!1.55e-07!12;UBERON:0003057!1.55e-07!12;UBERON:0000153!2.25e-07!94;UBERON:0002240!3.87e-07!6;UBERON:0005174!3.87e-07!6;UBERON:0001137!3.87e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.45e-15,3;UBERON:0002020,2.18e-13,34;UBERON:0001017,3.36e-13,73;UBERON:0001016,8.66e-13,75;UBERON:0001049,3.61e-10,52;UBERON:0005068,3.61e-10,52;UBERON:0006241,3.61e-10,52;UBERON:0007135,3.61e-10,52;UBERON:0000073,9.89e-10,54;UBERON:0000369,1.13e-09,5;UBERON:0002435,1.13e-09,5;UBERON:0000204,1.13e-09,5;UBERON:0010082,1.13e-09,5;UBERON:0004121,1.27e-09,95;UBERON:0000924,1.27e-09,95;UBERON:0006601,1.27e-09,95;UBERON:0001948,1.48e-09,5;UBERON:0002315,1.48e-09,5;UBERON:0002240,4.83e-08,6;UBERON:0005174,4.83e-08,6;UBERON:0001137,4.83e-08,6;UBERON:0002346,5.97e-08,64;UBERON:0003075,5.97e-08,64;UBERON:0007284,5.97e-08,64;UBERON:0003528,7.93e-08,29;UBERON:0002791,7.93e-08,29;UBERON:0001893,7.93e-08,29;UBERON:0000955,1.67e-07,47;UBERON:0006238,1.67e-07,47;UBERON:0003076,5.62e-07,12;UBERON:0003057,5.62e-07,12;UBERON:0010371,9.19e-07,73 | |||
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|short_description=p@chr5:37680151..37680172,+ | |short_description=p@chr5:37680151..37680172,+ | ||
}} | }} |
Revision as of 05:10, 14 November 2012
Short description: | p@chr5:37680151..37680172, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:37680151..37680172, + |
Coexpression cluster: | MCL_coexpression_mm9:367 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.15e-24 | 23 |
neuroblast (sensu Vertebrata) | 3.15e-24 | 23 |
neuron | 2.00e-16 | 33 |
neuronal stem cell | 2.00e-16 | 33 |
neuroblast | 2.00e-16 | 33 |
electrically signaling cell | 2.00e-16 | 33 |
neuron of the ventral spinal cord | 1.45e-15 | 3 |
granule cell | 6.98e-15 | 3 |
electrically responsive cell | 1.17e-13 | 39 |
electrically active cell | 1.17e-13 | 39 |
neural cell | 3.07e-12 | 43 |
ectodermal cell | 6.33e-12 | 44 |
neurectodermal cell | 6.33e-12 | 44 |
neuron of cerebral cortex | 5.70e-08 | 6 |
striatum neuron | 1.42e-07 | 3 |
embryonic cell | 6.85e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 1.45e-15 | 3 |
gray matter | 2.18e-13 | 34 |
central nervous system | 3.36e-13 | 73 |
nervous system | 8.66e-13 | 75 |
neural tube | 3.61e-10 | 52 |
neural rod | 3.61e-10 | 52 |
future spinal cord | 3.61e-10 | 52 |
neural keel | 3.61e-10 | 52 |
regional part of nervous system | 9.89e-10 | 54 |
corpus striatum | 1.13e-09 | 5 |
striatum | 1.13e-09 | 5 |
ventral part of telencephalon | 1.13e-09 | 5 |
future corpus striatum | 1.13e-09 | 5 |
ectoderm-derived structure | 1.27e-09 | 95 |
ectoderm | 1.27e-09 | 95 |
presumptive ectoderm | 1.27e-09 | 95 |
regional part of spinal cord | 1.48e-09 | 5 |
gray matter of spinal cord | 1.48e-09 | 5 |
spinal cord | 4.83e-08 | 6 |
dorsal region element | 4.83e-08 | 6 |
dorsum | 4.83e-08 | 6 |
neurectoderm | 5.97e-08 | 64 |
neural plate | 5.97e-08 | 64 |
presumptive neural plate | 5.97e-08 | 64 |
brain grey matter | 7.93e-08 | 29 |
regional part of telencephalon | 7.93e-08 | 29 |
telencephalon | 7.93e-08 | 29 |
brain | 1.67e-07 | 47 |
future brain | 1.67e-07 | 47 |
posterior neural tube | 5.62e-07 | 12 |
chordal neural plate | 5.62e-07 | 12 |
ecto-epithelium | 9.19e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.