FFCP PHASE1:Mm9::chr14:52898913..52899014,-: Difference between revisions
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|id=chr14:52898913..52899014,- | |id=chr14:52898913..52899014,- | ||
|ontology_enrichment_celltype=CL:0000393!7.29e-17!39;CL:0000211!7.29e-17!39;CL:0000540!7.26e-16!33;CL:0000047!7.26e-16!33;CL:0000031!7.26e-16!33;CL:0000404!7.26e-16!33;CL:0000055!7.13e-15!50;CL:0000221!1.05e-14!44;CL:0000133!1.05e-14!44;CL:0002319!1.30e-14!43;CL:0000117!1.77e-13!23;CL:0000337!1.77e-13!23 | |ontology_enrichment_celltype=CL:0000393!7.29e-17!39;CL:0000211!7.29e-17!39;CL:0000540!7.26e-16!33;CL:0000047!7.26e-16!33;CL:0000031!7.26e-16!33;CL:0000404!7.26e-16!33;CL:0000055!7.13e-15!50;CL:0000221!1.05e-14!44;CL:0000133!1.05e-14!44;CL:0002319!1.30e-14!43;CL:0000117!1.77e-13!23;CL:0000337!1.77e-13!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.24e-17,39;CL:0000211,7.24e-17,39;CL:0000540,7.21e-16,33;CL:0000047,7.21e-16,33;CL:0000031,7.21e-16,33;CL:0000404,7.21e-16,33;CL:0000221,1.04e-14,44;CL:0000133,1.04e-14,44;CL:0002319,1.29e-14,43;CL:0000117,1.76e-13,23;CL:0000337,1.76e-13,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.31e-32!75;UBERON:0001016!6.31e-32!75;UBERON:0001017!1.91e-31!73;UBERON:0005743!1.91e-31!73;UBERON:0004121!4.03e-31!102;UBERON:0000924!4.03e-31!102;UBERON:0006601!4.03e-31!102;UBERON:0002346!9.83e-31!71;UBERON:0003075!9.83e-31!71;UBERON:0007284!9.83e-31!71;UBERON:0000033!2.40e-26!63;UBERON:0001049!1.29e-24!52;UBERON:0005068!1.29e-24!52;UBERON:0006241!1.29e-24!52;UBERON:0007135!1.29e-24!52;UBERON:0000955!3.34e-24!50;UBERON:0006238!3.34e-24!50;UBERON:0002616!1.87e-23!49;UBERON:0003056!2.81e-23!49;UBERON:0003080!3.16e-20!40;UBERON:0000153!9.86e-20!94;UBERON:0002780!1.59e-19!39;UBERON:0001890!1.59e-19!39;UBERON:0006240!1.59e-19!39;UBERON:0002020!1.41e-18!34;UBERON:0007811!2.98e-17!86;UBERON:0002791!2.12e-16!29;UBERON:0003528!2.12e-16!29;UBERON:0001893!2.12e-16!29;UBERON:0000956!1.59e-11!21;UBERON:0001869!1.59e-11!21;UBERON:0000203!1.59e-11!21;UBERON:0002619!1.29e-09!17;UBERON:0000025!2.10e-09!114;UBERON:0004111!1.79e-08!122 | |ontology_enrichment_uberon=UBERON:0000073!6.31e-32!75;UBERON:0001016!6.31e-32!75;UBERON:0001017!1.91e-31!73;UBERON:0005743!1.91e-31!73;UBERON:0004121!4.03e-31!102;UBERON:0000924!4.03e-31!102;UBERON:0006601!4.03e-31!102;UBERON:0002346!9.83e-31!71;UBERON:0003075!9.83e-31!71;UBERON:0007284!9.83e-31!71;UBERON:0000033!2.40e-26!63;UBERON:0001049!1.29e-24!52;UBERON:0005068!1.29e-24!52;UBERON:0006241!1.29e-24!52;UBERON:0007135!1.29e-24!52;UBERON:0000955!3.34e-24!50;UBERON:0006238!3.34e-24!50;UBERON:0002616!1.87e-23!49;UBERON:0003056!2.81e-23!49;UBERON:0003080!3.16e-20!40;UBERON:0000153!9.86e-20!94;UBERON:0002780!1.59e-19!39;UBERON:0001890!1.59e-19!39;UBERON:0006240!1.59e-19!39;UBERON:0002020!1.41e-18!34;UBERON:0007811!2.98e-17!86;UBERON:0002791!2.12e-16!29;UBERON:0003528!2.12e-16!29;UBERON:0001893!2.12e-16!29;UBERON:0000956!1.59e-11!21;UBERON:0001869!1.59e-11!21;UBERON:0000203!1.59e-11!21;UBERON:0002619!1.29e-09!17;UBERON:0000025!2.10e-09!114;UBERON:0004111!1.79e-08!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.23e-32,75;UBERON:0001017,1.89e-31,73;UBERON:0002346,5.77e-29,64;UBERON:0003075,5.77e-29,64;UBERON:0007284,5.77e-29,64;UBERON:0004121,6.72e-29,95;UBERON:0000924,6.72e-29,95;UBERON:0006601,6.72e-29,95;UBERON:0010314,1.99e-26,92;UBERON:0000073,6.87e-26,54;UBERON:0001049,1.27e-24,52;UBERON:0005068,1.27e-24,52;UBERON:0006241,1.27e-24,52;UBERON:0007135,1.27e-24,52;UBERON:0010371,3.36e-24,73;UBERON:0003056,2.79e-23,49;UBERON:0000955,3.11e-22,47;UBERON:0006238,3.11e-22,47;UBERON:0002616,1.69e-21,46;UBERON:0003080,3.14e-20,40;UBERON:0002780,1.57e-19,39;UBERON:0001890,1.57e-19,39;UBERON:0006240,1.57e-19,39;UBERON:0002020,1.40e-18,34;UBERON:0003528,2.11e-16,29;UBERON:0002791,2.11e-16,29;UBERON:0001893,2.11e-16,29;UBERON:0000956,1.59e-11,21;UBERON:0001869,1.59e-11,21;UBERON:0000203,1.59e-11,21;UBERON:0002619,1.28e-09,17;UBERON:0000025,2.00e-09,114;UBERON:0004111,1.71e-08,122 | |||
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| ||
|short_description=p1@Rab2b | |short_description=p1@Rab2b | ||
}} | }} |
Revision as of 09:47, 14 November 2012
Short description: | p1@Rab2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rab2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000100631, ENSMUST00000167116, ENSMUST00000172488, ENSMUST00000174020_5end |
EntrezGene: | Rab2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.24e-17 | 39 |
electrically active cell | 7.24e-17 | 39 |
neuron | 7.21e-16 | 33 |
neuronal stem cell | 7.21e-16 | 33 |
neuroblast | 7.21e-16 | 33 |
electrically signaling cell | 7.21e-16 | 33 |
ectodermal cell | 1.04e-14 | 44 |
neurectodermal cell | 1.04e-14 | 44 |
neural cell | 1.29e-14 | 43 |
CNS neuron (sensu Vertebrata) | 1.76e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.76e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.23e-32 | 75 |
central nervous system | 1.89e-31 | 73 |
neurectoderm | 5.77e-29 | 64 |
neural plate | 5.77e-29 | 64 |
presumptive neural plate | 5.77e-29 | 64 |
ectoderm-derived structure | 6.72e-29 | 95 |
ectoderm | 6.72e-29 | 95 |
presumptive ectoderm | 6.72e-29 | 95 |
structure with developmental contribution from neural crest | 1.99e-26 | 92 |
regional part of nervous system | 6.87e-26 | 54 |
neural tube | 1.27e-24 | 52 |
neural rod | 1.27e-24 | 52 |
future spinal cord | 1.27e-24 | 52 |
neural keel | 1.27e-24 | 52 |
ecto-epithelium | 3.36e-24 | 73 |
pre-chordal neural plate | 2.79e-23 | 49 |
brain | 3.11e-22 | 47 |
future brain | 3.11e-22 | 47 |
regional part of brain | 1.69e-21 | 46 |
anterior neural tube | 3.14e-20 | 40 |
regional part of forebrain | 1.57e-19 | 39 |
forebrain | 1.57e-19 | 39 |
future forebrain | 1.57e-19 | 39 |
gray matter | 1.40e-18 | 34 |
brain grey matter | 2.11e-16 | 29 |
regional part of telencephalon | 2.11e-16 | 29 |
telencephalon | 2.11e-16 | 29 |
cerebral cortex | 1.59e-11 | 21 |
cerebral hemisphere | 1.59e-11 | 21 |
pallium | 1.59e-11 | 21 |
regional part of cerebral cortex | 1.28e-09 | 17 |
tube | 2.00e-09 | 114 |
anatomical conduit | 1.71e-08 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.