FFCP PHASE1:Mm9::chr12:107138066..107138076,+: Difference between revisions
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|id=chr12:107138066..107138076,+ | |id=chr12:107138066..107138076,+ | ||
|ontology_enrichment_celltype=CL:0002609!2.09e-18!6;CL:0002319!1.36e-12!43;CL:0000221!3.13e-12!44;CL:0000133!3.13e-12!44;CL:0000117!3.96e-11!23;CL:0000337!3.96e-11!23;CL:0000055!2.28e-10!50;CL:0002608!3.38e-10!3;CL:0002453!1.63e-09!8;CL:0000128!1.11e-08!6;CL:0000126!1.11e-08!6;CL:0000127!1.11e-08!6;CL:0000333!1.56e-07!10;CL:0000095!1.56e-07!10;CL:0000243!1.56e-07!10;CL:0000123!1.56e-07!10;CL:0000125!1.56e-07!10;CL:0000030!1.56e-07!10;CL:0000339!1.56e-07!10;CL:0002604!3.15e-07!2;CL:0002605!3.15e-07!2;CL:0000540!3.52e-07!33;CL:0000047!3.52e-07!33;CL:0000031!3.52e-07!33;CL:0000404!3.52e-07!33 | |ontology_enrichment_celltype=CL:0002609!2.09e-18!6;CL:0002319!1.36e-12!43;CL:0000221!3.13e-12!44;CL:0000133!3.13e-12!44;CL:0000117!3.96e-11!23;CL:0000337!3.96e-11!23;CL:0000055!2.28e-10!50;CL:0002608!3.38e-10!3;CL:0002453!1.63e-09!8;CL:0000128!1.11e-08!6;CL:0000126!1.11e-08!6;CL:0000127!1.11e-08!6;CL:0000333!1.56e-07!10;CL:0000095!1.56e-07!10;CL:0000243!1.56e-07!10;CL:0000123!1.56e-07!10;CL:0000125!1.56e-07!10;CL:0000030!1.56e-07!10;CL:0000339!1.56e-07!10;CL:0002604!3.15e-07!2;CL:0002605!3.15e-07!2;CL:0000540!3.52e-07!33;CL:0000047!3.52e-07!33;CL:0000031!3.52e-07!33;CL:0000404!3.52e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.45e-29,6;CL:0000128,2.03e-29,6;CL:0000126,2.03e-29,6;CL:0000127,2.03e-29,6;CL:0002605,2.32e-22,2;CL:0002604,2.32e-22,2;CL:0002453,3.23e-22,8;CL:0000333,6.94e-18,10;CL:0000095,6.94e-18,10;CL:0000243,6.94e-18,10;CL:0000123,6.94e-18,10;CL:0000125,6.94e-18,10;CL:0000030,6.94e-18,10;CL:0000339,6.94e-18,10;CL:0002319,2.91e-16,43;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0002608,7.42e-16,3;CL:0002321,5.63e-10,70;CL:0000117,4.68e-08,23;CL:0000337,4.68e-08,23;CL:0002603,5.87e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.39e-15!21;UBERON:0001869!1.39e-15!21;UBERON:0000203!1.39e-15!21;UBERON:0001954!1.87e-15!7;UBERON:0003022!1.87e-15!7;UBERON:0002421!1.87e-15!7;UBERON:0000349!1.87e-15!7;UBERON:0002600!1.87e-15!7;UBERON:0002791!7.54e-15!29;UBERON:0003528!7.54e-15!29;UBERON:0001893!7.54e-15!29;UBERON:0000955!1.78e-13!50;UBERON:0006238!1.78e-13!50;UBERON:0001017!2.19e-13!73;UBERON:0005743!2.19e-13!73;UBERON:0000073!6.60e-13!75;UBERON:0001016!6.60e-13!75;UBERON:0002020!2.97e-12!34;UBERON:0002616!4.35e-12!49;UBERON:0002780!5.07e-12!39;UBERON:0001890!5.07e-12!39;UBERON:0006240!5.07e-12!39;UBERON:0003080!1.21e-11!40;UBERON:0001049!3.45e-11!52;UBERON:0005068!3.45e-11!52;UBERON:0006241!3.45e-11!52;UBERON:0007135!3.45e-11!52;UBERON:0002619!2.50e-10!17;UBERON:0000033!6.34e-10!63;UBERON:0004121!2.77e-09!102;UBERON:0000924!2.77e-09!102;UBERON:0006601!2.77e-09!102;UBERON:0003056!5.89e-09!49;UBERON:0002346!2.84e-07!71;UBERON:0003075!2.84e-07!71;UBERON:0007284!2.84e-07!71 | |ontology_enrichment_uberon=UBERON:0000956!1.39e-15!21;UBERON:0001869!1.39e-15!21;UBERON:0000203!1.39e-15!21;UBERON:0001954!1.87e-15!7;UBERON:0003022!1.87e-15!7;UBERON:0002421!1.87e-15!7;UBERON:0000349!1.87e-15!7;UBERON:0002600!1.87e-15!7;UBERON:0002791!7.54e-15!29;UBERON:0003528!7.54e-15!29;UBERON:0001893!7.54e-15!29;UBERON:0000955!1.78e-13!50;UBERON:0006238!1.78e-13!50;UBERON:0001017!2.19e-13!73;UBERON:0005743!2.19e-13!73;UBERON:0000073!6.60e-13!75;UBERON:0001016!6.60e-13!75;UBERON:0002020!2.97e-12!34;UBERON:0002616!4.35e-12!49;UBERON:0002780!5.07e-12!39;UBERON:0001890!5.07e-12!39;UBERON:0006240!5.07e-12!39;UBERON:0003080!1.21e-11!40;UBERON:0001049!3.45e-11!52;UBERON:0005068!3.45e-11!52;UBERON:0006241!3.45e-11!52;UBERON:0007135!3.45e-11!52;UBERON:0002619!2.50e-10!17;UBERON:0000033!6.34e-10!63;UBERON:0004121!2.77e-09!102;UBERON:0000924!2.77e-09!102;UBERON:0006601!2.77e-09!102;UBERON:0003056!5.89e-09!49;UBERON:0002346!2.84e-07!71;UBERON:0003075!2.84e-07!71;UBERON:0007284!2.84e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.28e-25,7;UBERON:0003022,2.28e-25,7;UBERON:0002421,2.28e-25,7;UBERON:0000349,2.28e-25,7;UBERON:0002600,2.28e-25,7;UBERON:0000956,9.60e-19,21;UBERON:0001869,9.60e-19,21;UBERON:0000203,9.60e-19,21;UBERON:0003528,1.29e-13,29;UBERON:0002791,1.29e-13,29;UBERON:0001893,1.29e-13,29;UBERON:0002616,1.13e-11,46;UBERON:0002020,1.25e-11,34;UBERON:0000955,2.00e-11,47;UBERON:0006238,2.00e-11,47;UBERON:0002619,9.70e-11,17;UBERON:0001049,2.53e-10,52;UBERON:0005068,2.53e-10,52;UBERON:0006241,2.53e-10,52;UBERON:0007135,2.53e-10,52;UBERON:0002780,3.80e-10,39;UBERON:0001890,3.80e-10,39;UBERON:0006240,3.80e-10,39;UBERON:0000073,6.13e-10,54;UBERON:0003080,6.80e-10,40;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002346,2.26e-08,64;UBERON:0003075,2.26e-08,64;UBERON:0007284,2.26e-08,64;UBERON:0003056,4.44e-08,49;UBERON:0010371,2.53e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79655344036982,1.09843091367236,1.36100929351998,1.39986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,1.03689612308478,1.62007125998029,0.420649922702764,0,0,0.734944795289724,1.82106394934649,1.83843757322004,0,0,0,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309873682371932,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79655344036982,1.09843091367236,1.36100929351998,1.39986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,1.03689612308478,1.62007125998029,0.420649922702764,0,0,0.734944795289724,1.82106394934649,1.83843757322004,0,0,0,0.131886287730194,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309873682371932,0,0,0,0,0,0,0 | ||
|short_description=p1@uc007oza.1 | |short_description=p1@uc007oza.1 | ||
}} | }} |
Revision as of 15:58, 14 November 2012
Short description: | p1@uc007oza.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007oza.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:793 |
Association with transcript: | 15bp_to_uc007oza.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.45e-29 | 6 |
oligodendrocyte | 2.03e-29 | 6 |
macroglial cell | 2.03e-29 | 6 |
astrocyte | 2.03e-29 | 6 |
astrocyte of the cerebral cortex | 2.32e-22 | 2 |
astrocyte of the hippocampus | 2.32e-22 | 2 |
oligodendrocyte precursor cell | 3.23e-22 | 8 |
migratory neural crest cell | 6.94e-18 | 10 |
neuron associated cell | 6.94e-18 | 10 |
glial cell (sensu Vertebrata) | 6.94e-18 | 10 |
neuron associated cell (sensu Vertebrata) | 6.94e-18 | 10 |
glial cell | 6.94e-18 | 10 |
glioblast | 6.94e-18 | 10 |
glioblast (sensu Vertebrata) | 6.94e-18 | 10 |
neural cell | 2.91e-16 | 43 |
ectodermal cell | 6.80e-16 | 44 |
neurectodermal cell | 6.80e-16 | 44 |
hippocampal neuron | 7.42e-16 | 3 |
embryonic cell | 5.63e-10 | 70 |
CNS neuron (sensu Vertebrata) | 4.68e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.68e-08 | 23 |
astrocyte of the cerebellum | 5.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.28e-25 | 7 |
lobe parts of cerebral cortex | 2.28e-25 | 7 |
hippocampal formation | 2.28e-25 | 7 |
limbic system | 2.28e-25 | 7 |
limbic lobe | 2.28e-25 | 7 |
cerebral cortex | 9.60e-19 | 21 |
cerebral hemisphere | 9.60e-19 | 21 |
pallium | 9.60e-19 | 21 |
brain grey matter | 1.29e-13 | 29 |
regional part of telencephalon | 1.29e-13 | 29 |
telencephalon | 1.29e-13 | 29 |
regional part of brain | 1.13e-11 | 46 |
gray matter | 1.25e-11 | 34 |
brain | 2.00e-11 | 47 |
future brain | 2.00e-11 | 47 |
regional part of cerebral cortex | 9.70e-11 | 17 |
neural tube | 2.53e-10 | 52 |
neural rod | 2.53e-10 | 52 |
future spinal cord | 2.53e-10 | 52 |
neural keel | 2.53e-10 | 52 |
regional part of forebrain | 3.80e-10 | 39 |
forebrain | 3.80e-10 | 39 |
future forebrain | 3.80e-10 | 39 |
regional part of nervous system | 6.13e-10 | 54 |
anterior neural tube | 6.80e-10 | 40 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
neurectoderm | 2.26e-08 | 64 |
neural plate | 2.26e-08 | 64 |
presumptive neural plate | 2.26e-08 | 64 |
pre-chordal neural plate | 4.44e-08 | 49 |
ecto-epithelium | 2.53e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.