FFCP PHASE1:Mm9::chr2:179854006..179854112,+: Difference between revisions
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|id=chr2:179854006..179854112,+ | |id=chr2:179854006..179854112,+ | ||
|ontology_enrichment_celltype=CL:0000117!7.33e-10!23;CL:0000337!7.33e-10!23 | |ontology_enrichment_celltype=CL:0000117!7.33e-10!23;CL:0000337!7.33e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.33e-10,23;CL:0000337,7.33e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.74e-12!63;UBERON:0000955!1.82e-12!50;UBERON:0006238!1.82e-12!50;UBERON:0001049!2.30e-12!52;UBERON:0005068!2.30e-12!52;UBERON:0006241!2.30e-12!52;UBERON:0007135!2.30e-12!52;UBERON:0002616!3.29e-12!49;UBERON:0002020!1.23e-10!34;UBERON:0001017!1.76e-10!73;UBERON:0005743!1.76e-10!73;UBERON:0004121!2.25e-10!102;UBERON:0000924!2.25e-10!102;UBERON:0006601!2.25e-10!102;UBERON:0003080!3.84e-10!40;UBERON:0007023!4.28e-10!51;UBERON:0000073!8.55e-10!75;UBERON:0001016!8.55e-10!75;UBERON:0002780!1.13e-09!39;UBERON:0001890!1.13e-09!39;UBERON:0006240!1.13e-09!39;UBERON:0002791!1.53e-09!29;UBERON:0003528!1.53e-09!29;UBERON:0001893!1.53e-09!29;UBERON:0003056!1.83e-09!49;UBERON:0002346!3.56e-08!71;UBERON:0003075!3.56e-08!71;UBERON:0007284!3.56e-08!71;UBERON:0004111!1.55e-07!122 | |ontology_enrichment_uberon=UBERON:0000033!1.74e-12!63;UBERON:0000955!1.82e-12!50;UBERON:0006238!1.82e-12!50;UBERON:0001049!2.30e-12!52;UBERON:0005068!2.30e-12!52;UBERON:0006241!2.30e-12!52;UBERON:0007135!2.30e-12!52;UBERON:0002616!3.29e-12!49;UBERON:0002020!1.23e-10!34;UBERON:0001017!1.76e-10!73;UBERON:0005743!1.76e-10!73;UBERON:0004121!2.25e-10!102;UBERON:0000924!2.25e-10!102;UBERON:0006601!2.25e-10!102;UBERON:0003080!3.84e-10!40;UBERON:0007023!4.28e-10!51;UBERON:0000073!8.55e-10!75;UBERON:0001016!8.55e-10!75;UBERON:0002780!1.13e-09!39;UBERON:0001890!1.13e-09!39;UBERON:0006240!1.13e-09!39;UBERON:0002791!1.53e-09!29;UBERON:0003528!1.53e-09!29;UBERON:0001893!1.53e-09!29;UBERON:0003056!1.83e-09!49;UBERON:0002346!3.56e-08!71;UBERON:0003075!3.56e-08!71;UBERON:0007284!3.56e-08!71;UBERON:0004111!1.55e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.00e-13,54;UBERON:0004121,1.59e-12,95;UBERON:0000924,1.59e-12,95;UBERON:0006601,1.59e-12,95;UBERON:0001049,2.30e-12,52;UBERON:0005068,2.30e-12,52;UBERON:0006241,2.30e-12,52;UBERON:0007135,2.30e-12,52;UBERON:0010371,4.65e-12,73;UBERON:0000955,6.38e-11,47;UBERON:0006238,6.38e-11,47;UBERON:0002616,1.13e-10,46;UBERON:0002020,1.23e-10,34;UBERON:0002346,1.56e-10,64;UBERON:0003075,1.56e-10,64;UBERON:0007284,1.56e-10,64;UBERON:0001017,1.76e-10,73;UBERON:0003080,3.84e-10,40;UBERON:0007023,4.28e-10,51;UBERON:0001016,8.55e-10,75;UBERON:0002780,1.13e-09,39;UBERON:0001890,1.13e-09,39;UBERON:0006240,1.13e-09,39;UBERON:0003528,1.53e-09,29;UBERON:0002791,1.53e-09,29;UBERON:0001893,1.53e-09,29;UBERON:0003056,1.83e-09,49;UBERON:0010314,7.43e-08,92;UBERON:0004111,1.55e-07,122 | |||
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| ||
|short_description=p1@Osbpl2 | |short_description=p1@Osbpl2 | ||
}} | }} |
Revision as of 16:23, 14 November 2012
Short description: | p1@Osbpl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Osbpl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1766 |
Association with transcript: | 0bp_to_ENSMUST00000040668, ENSMUST00000140210, ENSMUST00000142376, NM_144500, uc008oik.1, uc008oil.1_5end |
EntrezGene: | Osbpl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.33e-10 | 23 |
neuroblast (sensu Vertebrata) | 7.33e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.00e-13 | 54 |
ectoderm-derived structure | 1.59e-12 | 95 |
ectoderm | 1.59e-12 | 95 |
presumptive ectoderm | 1.59e-12 | 95 |
neural tube | 2.30e-12 | 52 |
neural rod | 2.30e-12 | 52 |
future spinal cord | 2.30e-12 | 52 |
neural keel | 2.30e-12 | 52 |
ecto-epithelium | 4.65e-12 | 73 |
brain | 6.38e-11 | 47 |
future brain | 6.38e-11 | 47 |
regional part of brain | 1.13e-10 | 46 |
gray matter | 1.23e-10 | 34 |
neurectoderm | 1.56e-10 | 64 |
neural plate | 1.56e-10 | 64 |
presumptive neural plate | 1.56e-10 | 64 |
central nervous system | 1.76e-10 | 73 |
anterior neural tube | 3.84e-10 | 40 |
adult organism | 4.28e-10 | 51 |
nervous system | 8.55e-10 | 75 |
regional part of forebrain | 1.13e-09 | 39 |
forebrain | 1.13e-09 | 39 |
future forebrain | 1.13e-09 | 39 |
brain grey matter | 1.53e-09 | 29 |
regional part of telencephalon | 1.53e-09 | 29 |
telencephalon | 1.53e-09 | 29 |
pre-chordal neural plate | 1.83e-09 | 49 |
structure with developmental contribution from neural crest | 7.43e-08 | 92 |
anatomical conduit | 1.55e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.