FFCP PHASE1:Mm9::chr19:21852797..21852808,+: Difference between revisions
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|id=chr19:21852797..21852808,+ | |id=chr19:21852797..21852808,+ | ||
|ontology_enrichment_celltype=CL:0000117!7.84e-08!23;CL:0000337!7.84e-08!23 | |ontology_enrichment_celltype=CL:0000117!7.84e-08!23;CL:0000337!7.84e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-09,23;CL:0000337,1.45e-09,23;CL:0002609,1.71e-07,6;CL:0000540,2.58e-07,33;CL:0000047,2.58e-07,33;CL:0000031,2.58e-07,33;CL:0000404,2.58e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.94e-12!102;UBERON:0000924!1.94e-12!102;UBERON:0006601!1.94e-12!102;UBERON:0000033!3.06e-12!63;UBERON:0002346!2.28e-11!71;UBERON:0003075!2.28e-11!71;UBERON:0007284!2.28e-11!71;UBERON:0003056!5.58e-11!49;UBERON:0000955!1.40e-10!50;UBERON:0006238!1.40e-10!50;UBERON:0001017!2.17e-10!73;UBERON:0005743!2.17e-10!73;UBERON:0001049!2.23e-10!52;UBERON:0005068!2.23e-10!52;UBERON:0006241!2.23e-10!52;UBERON:0007135!2.23e-10!52;UBERON:0002616!3.74e-10!49;UBERON:0000073!5.85e-10!75;UBERON:0001016!5.85e-10!75;UBERON:0003080!7.37e-10!40;UBERON:0002780!1.47e-09!39;UBERON:0001890!1.47e-09!39;UBERON:0006240!1.47e-09!39;UBERON:0002791!9.91e-09!29;UBERON:0003528!9.91e-09!29;UBERON:0001893!9.91e-09!29;UBERON:0002020!1.94e-08!34;UBERON:0004111!7.44e-08!122;UBERON:0000025!5.06e-07!114 | |ontology_enrichment_uberon=UBERON:0004121!1.94e-12!102;UBERON:0000924!1.94e-12!102;UBERON:0006601!1.94e-12!102;UBERON:0000033!3.06e-12!63;UBERON:0002346!2.28e-11!71;UBERON:0003075!2.28e-11!71;UBERON:0007284!2.28e-11!71;UBERON:0003056!5.58e-11!49;UBERON:0000955!1.40e-10!50;UBERON:0006238!1.40e-10!50;UBERON:0001017!2.17e-10!73;UBERON:0005743!2.17e-10!73;UBERON:0001049!2.23e-10!52;UBERON:0005068!2.23e-10!52;UBERON:0006241!2.23e-10!52;UBERON:0007135!2.23e-10!52;UBERON:0002616!3.74e-10!49;UBERON:0000073!5.85e-10!75;UBERON:0001016!5.85e-10!75;UBERON:0003080!7.37e-10!40;UBERON:0002780!1.47e-09!39;UBERON:0001890!1.47e-09!39;UBERON:0006240!1.47e-09!39;UBERON:0002791!9.91e-09!29;UBERON:0003528!9.91e-09!29;UBERON:0001893!9.91e-09!29;UBERON:0002020!1.94e-08!34;UBERON:0004111!7.44e-08!122;UBERON:0000025!5.06e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.49e-12,29;UBERON:0002791,2.49e-12,29;UBERON:0001893,2.49e-12,29;UBERON:0001017,9.23e-12,73;UBERON:0002020,1.16e-11,34;UBERON:0000955,2.37e-11,47;UBERON:0006238,2.37e-11,47;UBERON:0003056,2.60e-11,49;UBERON:0010371,2.73e-11,73;UBERON:0010314,3.11e-11,92;UBERON:0003080,3.85e-11,40;UBERON:0001016,4.26e-11,75;UBERON:0002346,5.18e-11,64;UBERON:0003075,5.18e-11,64;UBERON:0007284,5.18e-11,64;UBERON:0001049,6.08e-11,52;UBERON:0005068,6.08e-11,52;UBERON:0006241,6.08e-11,52;UBERON:0007135,6.08e-11,52;UBERON:0004121,7.35e-11,95;UBERON:0000924,7.35e-11,95;UBERON:0006601,7.35e-11,95;UBERON:0002616,9.41e-11,46;UBERON:0002780,1.06e-10,39;UBERON:0001890,1.06e-10,39;UBERON:0006240,1.06e-10,39;UBERON:0000073,1.90e-10,54;UBERON:0000956,8.23e-09,21;UBERON:0001869,8.23e-09,21;UBERON:0000203,8.23e-09,21;UBERON:0004111,1.81e-08,122;UBERON:0000025,8.16e-08,114 | |||
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| ||
|short_description=p3@Tmem2 | |short_description=p3@Tmem2 | ||
}} | }} |
Revision as of 21:48, 14 November 2012
Short description: | p3@Tmem2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmem2_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENSMUST00000025663, ENSMUST00000096194, NM_001033759, NM_031997, uc008gzd.1, uc008gze.1, uc008gzf.1, uc008gzg.1, uc008gzh.1_5end |
EntrezGene: | Tmem2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.45e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.45e-09 | 23 |
neuron of cerebral cortex | 1.71e-07 | 6 |
neuron | 2.58e-07 | 33 |
neuronal stem cell | 2.58e-07 | 33 |
neuroblast | 2.58e-07 | 33 |
electrically signaling cell | 2.58e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 2.49e-12 | 29 |
regional part of telencephalon | 2.49e-12 | 29 |
telencephalon | 2.49e-12 | 29 |
central nervous system | 9.23e-12 | 73 |
gray matter | 1.16e-11 | 34 |
brain | 2.37e-11 | 47 |
future brain | 2.37e-11 | 47 |
pre-chordal neural plate | 2.60e-11 | 49 |
ecto-epithelium | 2.73e-11 | 73 |
structure with developmental contribution from neural crest | 3.11e-11 | 92 |
anterior neural tube | 3.85e-11 | 40 |
nervous system | 4.26e-11 | 75 |
neurectoderm | 5.18e-11 | 64 |
neural plate | 5.18e-11 | 64 |
presumptive neural plate | 5.18e-11 | 64 |
neural tube | 6.08e-11 | 52 |
neural rod | 6.08e-11 | 52 |
future spinal cord | 6.08e-11 | 52 |
neural keel | 6.08e-11 | 52 |
ectoderm-derived structure | 7.35e-11 | 95 |
ectoderm | 7.35e-11 | 95 |
presumptive ectoderm | 7.35e-11 | 95 |
regional part of brain | 9.41e-11 | 46 |
regional part of forebrain | 1.06e-10 | 39 |
forebrain | 1.06e-10 | 39 |
future forebrain | 1.06e-10 | 39 |
regional part of nervous system | 1.90e-10 | 54 |
cerebral cortex | 8.23e-09 | 21 |
cerebral hemisphere | 8.23e-09 | 21 |
pallium | 8.23e-09 | 21 |
anatomical conduit | 1.81e-08 | 122 |
tube | 8.16e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.