FFCP PHASE1:Mm9::chr2:25562315..25562344,+: Difference between revisions
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|id=chr2:25562315..25562344,+ | |id=chr2:25562315..25562344,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.76e-13!23;CL:0000337!3.76e-13!23;CL:0000221!5.34e-12!44;CL:0000133!5.34e-12!44;CL:0002319!1.33e-11!43;CL:0000540!3.06e-10!33;CL:0000047!3.06e-10!33;CL:0000031!3.06e-10!33;CL:0000404!3.06e-10!33;CL:0000055!4.38e-10!50;CL:0000393!6.40e-09!39;CL:0000211!6.40e-09!39 | |ontology_enrichment_celltype=CL:0000117!3.76e-13!23;CL:0000337!3.76e-13!23;CL:0000221!5.34e-12!44;CL:0000133!5.34e-12!44;CL:0002319!1.33e-11!43;CL:0000540!3.06e-10!33;CL:0000047!3.06e-10!33;CL:0000031!3.06e-10!33;CL:0000404!3.06e-10!33;CL:0000055!4.38e-10!50;CL:0000393!6.40e-09!39;CL:0000211!6.40e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.16e-13,23;CL:0000337,3.16e-13,23;CL:0000221,4.56e-12,44;CL:0000133,4.56e-12,44;CL:0002319,1.14e-11,43;CL:0000540,2.69e-10,33;CL:0000047,2.69e-10,33;CL:0000031,2.69e-10,33;CL:0000404,2.69e-10,33;CL:0000393,5.73e-09,39;CL:0000211,5.73e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.29e-25!73;UBERON:0005743!1.29e-25!73;UBERON:0000073!3.93e-25!75;UBERON:0001016!3.93e-25!75;UBERON:0001049!6.05e-22!52;UBERON:0005068!6.05e-22!52;UBERON:0006241!6.05e-22!52;UBERON:0007135!6.05e-22!52;UBERON:0004121!1.05e-21!102;UBERON:0000924!1.05e-21!102;UBERON:0006601!1.05e-21!102;UBERON:0002346!9.22e-21!71;UBERON:0003075!9.22e-21!71;UBERON:0007284!9.22e-21!71;UBERON:0000955!1.07e-20!50;UBERON:0006238!1.07e-20!50;UBERON:0002616!4.97e-20!49;UBERON:0000033!2.88e-19!63;UBERON:0002020!2.11e-17!34;UBERON:0003080!4.04e-16!40;UBERON:0002780!1.37e-15!39;UBERON:0001890!1.37e-15!39;UBERON:0006240!1.37e-15!39;UBERON:0003056!7.45e-15!49;UBERON:0002791!3.13e-14!29;UBERON:0003528!3.13e-14!29;UBERON:0001893!3.13e-14!29;UBERON:0000956!3.30e-10!21;UBERON:0001869!3.30e-10!21;UBERON:0000203!3.30e-10!21;UBERON:0002619!1.73e-08!17;UBERON:0007811!2.57e-08!86;UBERON:0000153!3.19e-07!94;UBERON:0002021!9.93e-07!10;UBERON:0000411!9.93e-07!10;UBERON:0001950!9.93e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!1.29e-25!73;UBERON:0005743!1.29e-25!73;UBERON:0000073!3.93e-25!75;UBERON:0001016!3.93e-25!75;UBERON:0001049!6.05e-22!52;UBERON:0005068!6.05e-22!52;UBERON:0006241!6.05e-22!52;UBERON:0007135!6.05e-22!52;UBERON:0004121!1.05e-21!102;UBERON:0000924!1.05e-21!102;UBERON:0006601!1.05e-21!102;UBERON:0002346!9.22e-21!71;UBERON:0003075!9.22e-21!71;UBERON:0007284!9.22e-21!71;UBERON:0000955!1.07e-20!50;UBERON:0006238!1.07e-20!50;UBERON:0002616!4.97e-20!49;UBERON:0000033!2.88e-19!63;UBERON:0002020!2.11e-17!34;UBERON:0003080!4.04e-16!40;UBERON:0002780!1.37e-15!39;UBERON:0001890!1.37e-15!39;UBERON:0006240!1.37e-15!39;UBERON:0003056!7.45e-15!49;UBERON:0002791!3.13e-14!29;UBERON:0003528!3.13e-14!29;UBERON:0001893!3.13e-14!29;UBERON:0000956!3.30e-10!21;UBERON:0001869!3.30e-10!21;UBERON:0000203!3.30e-10!21;UBERON:0002619!1.73e-08!17;UBERON:0007811!2.57e-08!86;UBERON:0000153!3.19e-07!94;UBERON:0002021!9.93e-07!10;UBERON:0000411!9.93e-07!10;UBERON:0001950!9.93e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.25e-25,73;UBERON:0001016,3.83e-25,75;UBERON:0000073,2.37e-23,54;UBERON:0001049,6.34e-22,52;UBERON:0005068,6.34e-22,52;UBERON:0006241,6.34e-22,52;UBERON:0007135,6.34e-22,52;UBERON:0004121,2.24e-20,95;UBERON:0000924,2.24e-20,95;UBERON:0006601,2.24e-20,95;UBERON:0002346,7.24e-20,64;UBERON:0003075,7.24e-20,64;UBERON:0007284,7.24e-20,64;UBERON:0000955,1.24e-18,47;UBERON:0006238,1.24e-18,47;UBERON:0002616,5.62e-18,46;UBERON:0010371,1.32e-17,73;UBERON:0002020,1.66e-17,34;UBERON:0010314,1.03e-16,92;UBERON:0003080,4.54e-16,40;UBERON:0002780,1.55e-15,39;UBERON:0001890,1.55e-15,39;UBERON:0006240,1.55e-15,39;UBERON:0003056,8.19e-15,49;UBERON:0003528,2.59e-14,29;UBERON:0002791,2.59e-14,29;UBERON:0001893,2.59e-14,29;UBERON:0000956,2.89e-10,21;UBERON:0001869,2.89e-10,21;UBERON:0000203,2.89e-10,21;UBERON:0002619,1.56e-08,17;UBERON:0002021,9.19e-07,10;UBERON:0000411,9.19e-07,10;UBERON:0001950,9.19e-07,10 | |||
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| ||
|short_description=p3@Bmyc | |short_description=p3@Bmyc | ||
}} | }} |
Revision as of 01:24, 15 November 2012
Short description: | p3@Bmyc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bmyc_5end |
Coexpression cluster: | MCL_coexpression_mm9:3336 |
Association with transcript: | -54bp_to_ENSMUST00000061483, NM_023326, uc008itg.1_5end |
EntrezGene: | Bmyc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.16e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.16e-13 | 23 |
ectodermal cell | 4.56e-12 | 44 |
neurectodermal cell | 4.56e-12 | 44 |
neural cell | 1.14e-11 | 43 |
neuron | 2.69e-10 | 33 |
neuronal stem cell | 2.69e-10 | 33 |
neuroblast | 2.69e-10 | 33 |
electrically signaling cell | 2.69e-10 | 33 |
electrically responsive cell | 5.73e-09 | 39 |
electrically active cell | 5.73e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.25e-25 | 73 |
nervous system | 3.83e-25 | 75 |
regional part of nervous system | 2.37e-23 | 54 |
neural tube | 6.34e-22 | 52 |
neural rod | 6.34e-22 | 52 |
future spinal cord | 6.34e-22 | 52 |
neural keel | 6.34e-22 | 52 |
ectoderm-derived structure | 2.24e-20 | 95 |
ectoderm | 2.24e-20 | 95 |
presumptive ectoderm | 2.24e-20 | 95 |
neurectoderm | 7.24e-20 | 64 |
neural plate | 7.24e-20 | 64 |
presumptive neural plate | 7.24e-20 | 64 |
brain | 1.24e-18 | 47 |
future brain | 1.24e-18 | 47 |
regional part of brain | 5.62e-18 | 46 |
ecto-epithelium | 1.32e-17 | 73 |
gray matter | 1.66e-17 | 34 |
structure with developmental contribution from neural crest | 1.03e-16 | 92 |
anterior neural tube | 4.54e-16 | 40 |
regional part of forebrain | 1.55e-15 | 39 |
forebrain | 1.55e-15 | 39 |
future forebrain | 1.55e-15 | 39 |
pre-chordal neural plate | 8.19e-15 | 49 |
brain grey matter | 2.59e-14 | 29 |
regional part of telencephalon | 2.59e-14 | 29 |
telencephalon | 2.59e-14 | 29 |
cerebral cortex | 2.89e-10 | 21 |
cerebral hemisphere | 2.89e-10 | 21 |
pallium | 2.89e-10 | 21 |
regional part of cerebral cortex | 1.56e-08 | 17 |
occipital lobe | 9.19e-07 | 10 |
visual cortex | 9.19e-07 | 10 |
neocortex | 9.19e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.