FFCP PHASE1:Mm9::chr9:110782825..110782850,+: Difference between revisions
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|id=chr9:110782825..110782850,+ | |id=chr9:110782825..110782850,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.82e-11,9;CL:0000789,2.82e-11,9;CL:0002420,2.82e-11,9;CL:0002419,2.82e-11,9;CL:0000790,2.82e-11,9;CL:0000624,1.90e-09,8;CL:0000084,5.67e-09,11;CL:0000827,5.67e-09,11;CL:0000838,4.13e-08,12;CL:0002031,1.65e-07,25;CL:0000542,2.21e-07,13;CL:0000051,2.21e-07,13;CL:0000068,3.53e-07,3;CL:0002202,3.53e-07,3;CL:0000069,3.53e-07,3;CL:0002632,3.53e-07,3;CL:0002368,3.53e-07,3;CL:0000307,3.53e-07,3;CL:0000377,3.53e-07,3;CL:0000738,6.31e-07,17;CL:0002087,6.31e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.15e-14!130;UBERON:0000925!5.15e-14!130;UBERON:0006595!5.15e-14!130;UBERON:0001007!7.52e-14!128;UBERON:0001555!7.52e-14!128;UBERON:0007026!7.52e-14!128;UBERON:0004921!1.26e-13!126;UBERON:0004185!1.26e-13!126;UBERON:0000077!1.21e-11!97;UBERON:0001041!5.21e-11!92;UBERON:0001004!6.66e-10!42;UBERON:0000065!1.86e-09!41;UBERON:0003104!4.19e-07!131;UBERON:0009142!4.19e-07!131 | |ontology_enrichment_uberon=UBERON:0004119!5.15e-14!130;UBERON:0000925!5.15e-14!130;UBERON:0006595!5.15e-14!130;UBERON:0001007!7.52e-14!128;UBERON:0001555!7.52e-14!128;UBERON:0007026!7.52e-14!128;UBERON:0004921!1.26e-13!126;UBERON:0004185!1.26e-13!126;UBERON:0000077!1.21e-11!97;UBERON:0001041!5.21e-11!92;UBERON:0001004!6.66e-10!42;UBERON:0000065!1.86e-09!41;UBERON:0003104!4.19e-07!131;UBERON:0009142!4.19e-07!131 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,4.75e-14,17;UBERON:0005181,4.75e-14,17;UBERON:0002224,4.75e-14,17;UBERON:0000915,4.75e-14,17;UBERON:0008947,4.75e-14,17;UBERON:0003258,4.75e-14,17;UBERON:0001004,9.39e-14,42;UBERON:0000065,8.99e-13,41;UBERON:0004921,3.57e-10,114;UBERON:0001007,7.37e-10,116;UBERON:0001555,7.37e-10,116;UBERON:0007026,7.37e-10,116;UBERON:0004119,1.48e-09,118;UBERON:0000925,1.48e-09,118;UBERON:0006595,1.48e-09,118;UBERON:0002048,2.57e-09,14;UBERON:0000117,2.57e-09,14;UBERON:0000171,2.57e-09,14;UBERON:0000170,2.57e-09,14;UBERON:0005597,2.57e-09,14;UBERON:0000118,2.57e-09,14;UBERON:0001041,6.10e-08,80;UBERON:0005153,2.34e-07,17;UBERON:0003126,3.53e-07,3;UBERON:0001005,3.53e-07,3;UBERON:0007196,3.53e-07,3;UBERON:0001558,3.53e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0.90739263392049,0.500895729946347,0.33575854382378,0.467225281191051,3.74457637980571,3.23814060948833,2.57470978954193,0.34243593645101,0.638177271962691,32.6993394168603,14.9488888136486,0,0,0,1.10411757875383,1.37114433605739,1.27316895539409,0.850432901510698,0,0,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0,0,0.665191531965914,0,0,0,0.577703239502549,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,14.5072428402269,14.7881271622684,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,3.07374644257244,0,0,0,0.856952953211411,0.441737081903227,0,0,0,1.10115880999389,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0.427115042397309,0,0,0,3.18850937571846,0.860423876981386,0,0.539703191637817,0.649776417447669,0.448026887097336,0,0,0,0,0.281686839553361,0,0,0,4.11332977921307,3.04031838570118,5.05524445014783,0.34255163915718,2.33044095282455,0.29688427812965,0,0,0.461230994512117,0,0.470354828542819,0.376999773989026,2.47194967734374,0.433798070759735,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0.203678727700633,0.373220911830279,0.505445516867349,0.841767423545896,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0,0.219550115291051,0.268412837520744,0.210289948564127,0,1.32167513193519,0,0,0,0.128867461322093,1.21010114774006,0.889512175379481,1.14135375667535,0.474529061544512,1.15289268306808,2.26201687920243,2.98434708061726,2.53453313254856,0,0.432276099749388,0.398282546508734,0,0.228497025219458,0,0,0,0.420814919341911,0.632365371242573,1.03327103585722,0.784993639206874,0.740382983530803,0,0,0,0.674586337154561,0,0,0,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,0,0.505157755894224,0.717589654087649,0,3.8798169934987,0,0.162964976442026,0,1.64283173801951,2.34508760418542,0.952174563544055,2.14647012643579,1.26108115284953,1.99318220683897,1.43509291791738,1.63863314715738,0.518054945597687,3.18227928879325,0,0.54390568381871,0.983528546038072,0.275936746304732,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.81443479676788,0.989820737835213,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.775284879504663,0.727067458955011,0,0.316036757935816,0,2.06271086496374,1.70219802876894,0,0.129358683782755,0,0.177340233642274,0.713475270408282,0.493647061806363,0.608929898229199,0.23467170806371,0.42366414172764,0,0.32977250588296,0.645857706783622,0.120625849856312,0.119372344003136,0.492422699235184,0.291480836629851,0.741701208042039,0.512612642393558,0.206386867963223,0.185194527369712,0.376736914009382,0.820165366326151,0.915112692826091,0.169978429993855,0.419854356970974,0.414599921413271,0.954670618015114,0.158167996790568,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.539457385539283,0.991841468704031,0.785267825952089,1.8146096260851,1.24267862617385,0.56369293868419,0,0,0,0.387479470433193,0,0.58678619322877,0.13020438484395,0.629156066554265,0.241584120826006,0.288030006257865,3.16011120628178,0.405450430580328,0.308132871494482,0.649604114888975,0,0.39736270956253,0.961563596159751,0.590758108698309,0.302899349844443,0.533447646584999,0.201652370273681,1.46186821109629,0.962118416403295,1.28564592399726,0.680191150845634,0,0,0,2.51146472241848,0.375364950902364,2.74727436400898,2.14368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0,0.377252682772152,0.37456602987953,0.384150914429216,0.287177344778066,1.42888107384922,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.0941093804153306,0.423073039458382,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.394017929502254,0,0,0.385813221962283,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0.220591419119515,0 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| ||
|short_description=p3@Als2cl | |short_description=p3@Als2cl | ||
}} | }} |
Revision as of 06:16, 15 November 2012
Short description: | p3@Als2cl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Als2cl_5end |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | 0bp_to_ENSMUST00000155014, NM_001146060, uc009rvf.2_5end |
EntrezGene: | Als2cl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.82e-11 | 9 |
alpha-beta T cell | 2.82e-11 | 9 |
immature T cell | 2.82e-11 | 9 |
mature T cell | 2.82e-11 | 9 |
immature alpha-beta T cell | 2.82e-11 | 9 |
CD4-positive, alpha-beta T cell | 1.90e-09 | 8 |
T cell | 5.67e-09 | 11 |
pro-T cell | 5.67e-09 | 11 |
lymphoid lineage restricted progenitor cell | 4.13e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 1.65e-07 | 25 |
lymphocyte | 2.21e-07 | 13 |
common lymphoid progenitor | 2.21e-07 | 13 |
duct epithelial cell | 3.53e-07 | 3 |
epithelial cell of tracheobronchial tree | 3.53e-07 | 3 |
branched duct epithelial cell | 3.53e-07 | 3 |
epithelial cell of lower respiratory tract | 3.53e-07 | 3 |
respiratory epithelial cell | 3.53e-07 | 3 |
tracheal epithelial cell | 3.53e-07 | 3 |
tracheoblast | 3.53e-07 | 3 |
leukocyte | 6.31e-07 | 17 |
nongranular leukocyte | 6.31e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 4.75e-14 | 17 |
thoracic segment organ | 4.75e-14 | 17 |
thoracic cavity | 4.75e-14 | 17 |
thoracic segment of trunk | 4.75e-14 | 17 |
respiratory primordium | 4.75e-14 | 17 |
endoderm of foregut | 4.75e-14 | 17 |
respiratory system | 9.39e-14 | 42 |
respiratory tract | 8.99e-13 | 41 |
subdivision of digestive tract | 3.57e-10 | 114 |
digestive system | 7.37e-10 | 116 |
digestive tract | 7.37e-10 | 116 |
primitive gut | 7.37e-10 | 116 |
endoderm-derived structure | 1.48e-09 | 118 |
endoderm | 1.48e-09 | 118 |
presumptive endoderm | 1.48e-09 | 118 |
lung | 2.57e-09 | 14 |
respiratory tube | 2.57e-09 | 14 |
respiration organ | 2.57e-09 | 14 |
pair of lungs | 2.57e-09 | 14 |
lung primordium | 2.57e-09 | 14 |
lung bud | 2.57e-09 | 14 |
foregut | 6.10e-08 | 80 |
epithelial bud | 2.34e-07 | 17 |
trachea | 3.53e-07 | 3 |
respiratory airway | 3.53e-07 | 3 |
tracheobronchial tree | 3.53e-07 | 3 |
lower respiratory tract | 3.53e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.