FFCP PHASE1:Hg19::chr14:22191940..22191964,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000791!1.01e-28!18;CL:0000789!1.01e-28!18;CL:0002420!1.01e-28!18;CL:0002419!1.01e-28!18;CL:0000790!1.01e-28!18;CL:0000084!7.59e-22!25;CL:0000827!7.59e-22!25;CL:0000625!1.31e-20!11;CL:0000624!9.49e-12!6;CL:0000838!4.44e-11!52;CL:0000542!9.35e-11!53;CL:0000051!9.35e-11!53;CL:0000738!4.72e-08!140;CL:0002087!1.21e-07!119;CL:0000898!5.70e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.01e-28!18;CL:0000789!1.01e-28!18;CL:0002420!1.01e-28!18;CL:0002419!1.01e-28!18;CL:0000790!1.01e-28!18;CL:0000084!7.59e-22!25;CL:0000827!7.59e-22!25;CL:0000625!1.31e-20!11;CL:0000624!9.49e-12!6;CL:0000838!4.44e-11!52;CL:0000542!9.35e-11!53;CL:0000051!9.35e-11!53;CL:0000738!4.72e-08!140;CL:0002087!1.21e-07!119;CL:0000898!5.70e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.04e-47;18!CL:0000789;1.04e-47;18!CL:0002419;1.04e-47;18!CL:0000084;1.61e-37;25!CL:0000625;1.19e-33;11!CL:0000624;1.10e-18;6!CL:0000898;1.26e-10;3!CL:0000542;1.45e-10;53!CL:0000226;3.17e-09;3!CL:0000842;3.17e-09;3!CL:0000815;9.43e-08;2!CL:0000792;9.43e-08;2!CL:0002677;9.43e-08;2 | |ontology_enrichment_celltype_v019=CL:0000791;1.04e-47;18!CL:0000789;1.04e-47;18!CL:0002419;1.04e-47;18!CL:0000084;1.61e-37;25!CL:0000625;1.19e-33;11!CL:0000624;1.10e-18;6!CL:0000898;1.26e-10;3!CL:0000542;1.45e-10;53!CL:0000226;3.17e-09;3!CL:0000842;3.17e-09;3!CL:0000815;9.43e-08;2!CL:0000792;9.43e-08;2!CL:0002677;9.43e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.25e-47,18;CL:0000789,1.25e-47,18;CL:0002420,1.25e-47,18;CL:0002419,1.25e-47,18;CL:0000790,1.25e-47,18;CL:0000084,1.89e-37,25;CL:0000827,1.89e-37,25;CL:0000625,1.37e-33,11;CL:0000838,1.79e-19,52;CL:0000542,5.24e-19,53;CL:0000051,5.24e-19,53;CL:0000624,1.15e-18,6;CL:0000898,1.19e-10,3;CL:0002087,2.27e-10,115;CL:0000226,2.62e-09,3;CL:0000842,2.62e-09,3;CL:0000738,1.12e-08,136;CL:0000815,9.28e-08,2;CL:0000792,9.28e-08,2;CL:0002677,9.28e-08,2;CL:0002031,4.45e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.04e-47;18!CL:0000051;1.45e-10;53 | |ontology_enrichment_development_v019=CL:0000790;1.04e-47;18!CL:0000051;1.45e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.63e-07;10 | |ontology_enrichment_disease_v019=DOID:171;2.63e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,2.43e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.60e-15!15;UBERON:0000179!1.60e-15!15;UBERON:0000463!1.60e-15!15;UBERON:0007023!5.06e-11!115 | |ontology_enrichment_uberon=UBERON:0000178!1.60e-15!15;UBERON:0000179!1.60e-15!15;UBERON:0000463!1.60e-15!15;UBERON:0007023!5.06e-11!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-25;15!UBERON:0000179;1.06e-25;15!UBERON:0000463;1.06e-25;15!UBERON:0002390;7.35e-16;32!UBERON:0002193;1.24e-09;42!UBERON:0002370;1.58e-07;2!UBERON:0005058;1.58e-07;2!UBERON:0009113;1.58e-07;2!UBERON:0002346;2.93e-07;4!UBERON:0000923;2.93e-07;4!UBERON:0010316;2.93e-07;4!UBERON:0005291;2.93e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-25;15!UBERON:0000179;1.06e-25;15!UBERON:0000463;1.06e-25;15!UBERON:0002390;7.35e-16;32!UBERON:0002193;1.24e-09;42!UBERON:0002370;1.58e-07;2!UBERON:0005058;1.58e-07;2!UBERON:0009113;1.58e-07;2!UBERON:0002346;2.93e-07;4!UBERON:0000923;2.93e-07;4!UBERON:0010316;2.93e-07;4!UBERON:0005291;2.93e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.08e-26,15;UBERON:0000179,8.08e-26,15;UBERON:0000463,8.08e-26,15;UBERON:0002370,6.49e-08,4;UBERON:0005058,6.49e-08,4;UBERON:0009113,6.49e-08,4;UBERON:0003295,6.49e-08,4;UBERON:0005562,6.49e-08,4;UBERON:0004177,2.48e-07,7;UBERON:0005057,2.48e-07,7 | |||
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| ||
|short_description=p2@TRAV3 | |short_description=p2@TRAV3 | ||
}} | }} |
Revision as of 17:17, 15 November 2012
Short description: | p2@TRAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TRAV3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000390425_5end |
EntrezGene: | NA |
HGNC: | 12128 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.25e-47 | 18 |
alpha-beta T cell | 1.25e-47 | 18 |
immature T cell | 1.25e-47 | 18 |
mature T cell | 1.25e-47 | 18 |
immature alpha-beta T cell | 1.25e-47 | 18 |
T cell | 1.89e-37 | 25 |
pro-T cell | 1.89e-37 | 25 |
CD8-positive, alpha-beta T cell | 1.37e-33 | 11 |
lymphoid lineage restricted progenitor cell | 1.79e-19 | 52 |
lymphocyte | 5.24e-19 | 53 |
common lymphoid progenitor | 5.24e-19 | 53 |
CD4-positive, alpha-beta T cell | 1.15e-18 | 6 |
naive T cell | 1.19e-10 | 3 |
nongranular leukocyte | 2.27e-10 | 115 |
single nucleate cell | 2.62e-09 | 3 |
mononuclear cell | 2.62e-09 | 3 |
leukocyte | 1.12e-08 | 136 |
regulatory T cell | 9.28e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.28e-08 | 2 |
naive regulatory T cell | 9.28e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 4.45e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 8.08e-26 | 15 |
haemolymphatic fluid | 8.08e-26 | 15 |
organism substance | 8.08e-26 | 15 |
thymus | 6.49e-08 | 4 |
hemolymphoid system gland | 6.49e-08 | 4 |
thymic region | 6.49e-08 | 4 |
pharyngeal gland | 6.49e-08 | 4 |
thymus primordium | 6.49e-08 | 4 |
hemopoietic organ | 2.48e-07 | 7 |
immune organ | 2.48e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.43e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.