FFCP PHASE1:Hg19::chr20:21086993..21087007,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!3.73e-12!5;CL:0002274!4.63e-08!5;CL:0000457!4.63e-08!5;CL:0002191!4.63e-08!5;CL:0000097!4.63e-08!5;CL:0000831!4.63e-08!5;CL:0002028!4.63e-08!5 | |ontology_enrichment_celltype=CL:0002322!3.73e-12!5;CL:0002274!4.63e-08!5;CL:0000457!4.63e-08!5;CL:0002191!4.63e-08!5;CL:0000097!4.63e-08!5;CL:0000831!4.63e-08!5;CL:0002028!4.63e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.14e-13;2!CL:0000242;1.14e-13;2!CL:0002321;1.29e-07;15 | |ontology_enrichment_celltype_v019=CL:0000123;1.14e-13;2!CL:0000242;1.14e-13;2!CL:0002321;1.29e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.37e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.72e-26;1!UBERON:0006241;1.10e-09;3!UBERON:0003057;1.10e-09;3!UBERON:0003056;1.47e-09;3 | |ontology_enrichment_development_v019=UBERON:0005425;6.72e-26;1!UBERON:0006241;1.10e-09;3!UBERON:0003057;1.10e-09;3!UBERON:0003056;1.47e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000941;6.72e-26;1!UBERON:0001785;6.72e-26;1!UBERON:0002464;6.72e-26;1!UBERON:0004904;6.72e-26;1!UBERON:0001021;6.72e-26;1!UBERON:0000007;1.14e-13;2!UBERON:0003714;1.14e-13;2!UBERON:0001875;1.14e-13;2!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0006514;1.14e-13;2!UBERON:0000010;4.54e-12;8!UBERON:0002240;1.10e-09;3!UBERON:0005174;1.10e-09;3!UBERON:0001137;1.10e-09;3!UBERON:0003296;1.75e-07;4!UBERON:0010133;1.75e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000941;6.72e-26;1!UBERON:0001785;6.72e-26;1!UBERON:0002464;6.72e-26;1!UBERON:0004904;6.72e-26;1!UBERON:0001021;6.72e-26;1!UBERON:0000007;1.14e-13;2!UBERON:0003714;1.14e-13;2!UBERON:0001875;1.14e-13;2!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0006514;1.14e-13;2!UBERON:0000010;4.54e-12;8!UBERON:0002240;1.10e-09;3!UBERON:0005174;1.10e-09;3!UBERON:0001137;1.10e-09;3!UBERON:0003296;1.75e-07;4!UBERON:0010133;1.75e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.58e-26,1;UBERON:0001785,3.58e-26,1;UBERON:0002464,3.58e-26,1;UBERON:0004904,3.58e-26,1;UBERON:0001021,3.58e-26,1;UBERON:0003902,3.58e-26,1;UBERON:0005425,3.58e-26,1;UBERON:0003714,8.28e-14,2;UBERON:0005162,8.28e-14,2;UBERON:0000122,8.28e-14,2;UBERON:0000007,1.07e-13,2;UBERON:0001875,1.21e-13,2;UBERON:0006514,1.21e-13,2;UBERON:0000010,3.95e-12,8;UBERON:0002240,1.10e-09,3;UBERON:0005174,1.10e-09,3;UBERON:0001137,1.10e-09,3;UBERON:0001781,1.49e-07,4;UBERON:0003296,1.69e-07,4;UBERON:0010133,1.69e-07,4;UBERON:0001016,5.44e-07,89 | |||
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| ||
|short_description=p1@LINC00237 | |short_description=p1@LINC00237 | ||
}} | }} |
Revision as of 12:13, 18 November 2012
Short description: | p1@LINC00237 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LINC00237_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | -18bp_to_ENST00000420705_5end |
EntrezGene: | NA |
HGNC: | 38166 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.37e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.58e-26 | 1 |
cranial nerve | 3.58e-26 | 1 |
nerve trunk | 3.58e-26 | 1 |
nerve connecting eye with brain | 3.58e-26 | 1 |
nerve | 3.58e-26 | 1 |
retinal neural layer | 3.58e-26 | 1 |
presumptive neural retina | 3.58e-26 | 1 |
neural tissue | 8.28e-14 | 2 |
multi cell component structure | 8.28e-14 | 2 |
neuron projection bundle | 8.28e-14 | 2 |
pituitary gland | 1.07e-13 | 2 |
globus pallidus | 1.21e-13 | 2 |
pallidum | 1.21e-13 | 2 |
peripheral nervous system | 3.95e-12 | 8 |
spinal cord | 1.10e-09 | 3 |
dorsal region element | 1.10e-09 | 3 |
dorsum | 1.10e-09 | 3 |
layer of retina | 1.49e-07 | 4 |
gland of diencephalon | 1.69e-07 | 4 |
neuroendocrine gland | 1.69e-07 | 4 |
nervous system | 5.44e-07 | 89 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.