FFCP PHASE1:Hg19::chr22:40297079..40297104,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!3.92e-37!172;CL:0000566!3.92e-37!172;CL:0002032!4.94e-35!165;CL:0000837!4.94e-35!165;CL:0000542!7.49e-35!53;CL:0000051!7.49e-35!53;CL:0000838!6.29e-34!52;CL:0000988!2.30e-33!182;CL:0000738!1.82e-32!140;CL:0002031!3.61e-28!124;CL:0002087!3.13e-26!119;CL:0000791!1.34e-21!18;CL:0000789!1.34e-21!18;CL:0002420!1.34e-21!18;CL:0002419!1.34e-21!18;CL:0000790!1.34e-21!18;CL:0000084!3.10e-19!25;CL:0000827!3.10e-19!25;CL:0000625!2.38e-14!11;CL:0000945!3.65e-13!24;CL:0000826!3.65e-13!24;CL:0000236!1.96e-10!14;CL:0000763!7.27e-09!112;CL:0000049!7.27e-09!112;CL:0000624!5.01e-08!6;CL:0002274!9.74e-08!5;CL:0000457!9.74e-08!5;CL:0002191!9.74e-08!5;CL:0000097!9.74e-08!5;CL:0000831!9.74e-08!5;CL:0002028!9.74e-08!5 | |ontology_enrichment_celltype=CL:0000037!3.92e-37!172;CL:0000566!3.92e-37!172;CL:0002032!4.94e-35!165;CL:0000837!4.94e-35!165;CL:0000542!7.49e-35!53;CL:0000051!7.49e-35!53;CL:0000838!6.29e-34!52;CL:0000988!2.30e-33!182;CL:0000738!1.82e-32!140;CL:0002031!3.61e-28!124;CL:0002087!3.13e-26!119;CL:0000791!1.34e-21!18;CL:0000789!1.34e-21!18;CL:0002420!1.34e-21!18;CL:0002419!1.34e-21!18;CL:0000790!1.34e-21!18;CL:0000084!3.10e-19!25;CL:0000827!3.10e-19!25;CL:0000625!2.38e-14!11;CL:0000945!3.65e-13!24;CL:0000826!3.65e-13!24;CL:0000236!1.96e-10!14;CL:0000763!7.27e-09!112;CL:0000049!7.27e-09!112;CL:0000624!5.01e-08!6;CL:0002274!9.74e-08!5;CL:0000457!9.74e-08!5;CL:0002191!9.74e-08!5;CL:0000097!9.74e-08!5;CL:0000831!9.74e-08!5;CL:0002028!9.74e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.87e-31;18!CL:0000789;3.87e-31;18!CL:0002419;3.87e-31;18!CL:0000084;1.31e-28;25!CL:0000542;8.72e-27;53!CL:0000625;2.04e-20;11!CL:0000236;1.79e-16;13!CL:0000945;3.39e-16;24!CL:0000624;4.31e-11;6!CL:0000097;1.09e-10;5!CL:0002087;1.05e-09;104!CL:0000738;3.82e-07;136 | |ontology_enrichment_celltype_v019=CL:0000791;3.87e-31;18!CL:0000789;3.87e-31;18!CL:0002419;3.87e-31;18!CL:0000084;1.31e-28;25!CL:0000542;8.72e-27;53!CL:0000625;2.04e-20;11!CL:0000236;1.79e-16;13!CL:0000945;3.39e-16;24!CL:0000624;4.31e-11;6!CL:0000097;1.09e-10;5!CL:0002087;1.05e-09;104!CL:0000738;3.82e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.68e-49,53;CL:0000051,8.68e-49,53;CL:0000838,1.99e-47,52;CL:0000037,8.45e-36,168;CL:0000988,6.20e-33,177;CL:0002032,1.03e-32,161;CL:0000837,1.03e-32,161;CL:0000738,1.94e-31,136;CL:0000791,3.67e-31,18;CL:0000789,3.67e-31,18;CL:0002420,3.67e-31,18;CL:0002419,3.67e-31,18;CL:0000790,3.67e-31,18;CL:0002031,4.25e-29,120;CL:0000084,1.29e-28,25;CL:0000827,1.29e-28,25;CL:0002087,2.75e-26,115;CL:0000625,1.96e-20,11;CL:0000945,3.11e-16,24;CL:0000826,3.11e-16,24;CL:0000236,4.22e-15,14;CL:0000624,4.20e-11,6;CL:0000097,1.12e-10,5;CL:0002028,1.12e-10,5;CL:0000134,1.49e-07,354;CL:0002320,4.32e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;3.87e-31;18!CL:0000051;8.72e-27;53 | |ontology_enrichment_development_v019=CL:0000790;3.87e-31;18!CL:0000051;8.72e-27;53 | ||
|ontology_enrichment_disease=DOID:1036!4.95e-08!8 | |ontology_enrichment_disease=DOID:1036!4.95e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;6.40e-07;8 | |ontology_enrichment_disease_v019=DOID:1036;6.40e-07;8 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,5.30e-07,51;DOID:0060083,5.30e-07,51;DOID:1036,6.40e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-15!115;UBERON:0002390!2.00e-09!102;UBERON:0003061!2.00e-09!102;UBERON:0004177!9.01e-09!7;UBERON:0002193!9.19e-09!112;UBERON:0000178!1.18e-08!15;UBERON:0000179!1.18e-08!15;UBERON:0000463!1.18e-08!15 | |ontology_enrichment_uberon=UBERON:0007023!1.38e-15!115;UBERON:0002390!2.00e-09!102;UBERON:0003061!2.00e-09!102;UBERON:0004177!9.01e-09!7;UBERON:0002193!9.19e-09!112;UBERON:0000178!1.18e-08!15;UBERON:0000179!1.18e-08!15;UBERON:0000463!1.18e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.37e-13;15!UBERON:0000179;7.37e-13;15!UBERON:0000463;7.37e-13;15!UBERON:0002390;3.98e-10;32!UBERON:0004177;1.49e-09;5!UBERON:0005057;1.49e-09;5!UBERON:0002193;5.66e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;7.37e-13;15!UBERON:0000179;7.37e-13;15!UBERON:0000463;7.37e-13;15!UBERON:0002390;3.98e-10;32!UBERON:0004177;1.49e-09;5!UBERON:0005057;1.49e-09;5!UBERON:0002193;5.66e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.14e-13,15;UBERON:0000179,8.14e-13,15;UBERON:0000463,8.14e-13,15;UBERON:0004177,3.36e-12,7;UBERON:0005057,3.36e-12,7;UBERON:0002370,4.29e-08,4;UBERON:0005058,4.29e-08,4;UBERON:0009113,4.29e-08,4;UBERON:0003295,4.29e-08,4;UBERON:0005562,4.29e-08,4;UBERON:0002390,5.90e-08,98;UBERON:0003061,5.90e-08,98;UBERON:0002193,7.70e-08,108 | |||
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| ||
|short_description=p2@GRAP2 | |short_description=p2@GRAP2 | ||
}} | }} |
Revision as of 23:25, 18 November 2012
Short description: | p2@GRAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GRAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344138, ENST00000543252, ENST00000544006, NM_004810, uc003ayh.1, uc003ayi.2, uc011aom.1, uc011aon.1_5end |
EntrezGene: | GRAP2 |
HGNC: | 4563 |
UniProt: | O75791F5H1V3B7Z8F8Q6FI14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.68e-49 | 53 |
common lymphoid progenitor | 8.68e-49 | 53 |
lymphoid lineage restricted progenitor cell | 1.99e-47 | 52 |
hematopoietic stem cell | 8.45e-36 | 168 |
hematopoietic cell | 6.20e-33 | 177 |
hematopoietic oligopotent progenitor cell | 1.03e-32 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-32 | 161 |
leukocyte | 1.94e-31 | 136 |
mature alpha-beta T cell | 3.67e-31 | 18 |
alpha-beta T cell | 3.67e-31 | 18 |
immature T cell | 3.67e-31 | 18 |
mature T cell | 3.67e-31 | 18 |
immature alpha-beta T cell | 3.67e-31 | 18 |
hematopoietic lineage restricted progenitor cell | 4.25e-29 | 120 |
T cell | 1.29e-28 | 25 |
pro-T cell | 1.29e-28 | 25 |
nongranular leukocyte | 2.75e-26 | 115 |
CD8-positive, alpha-beta T cell | 1.96e-20 | 11 |
lymphocyte of B lineage | 3.11e-16 | 24 |
pro-B cell | 3.11e-16 | 24 |
B cell | 4.22e-15 | 14 |
CD4-positive, alpha-beta T cell | 4.20e-11 | 6 |
mast cell | 1.12e-10 | 5 |
basophil mast progenitor cell | 1.12e-10 | 5 |
mesenchymal cell | 1.49e-07 | 354 |
connective tissue cell | 4.32e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
blood | 8.14e-13 | 15 |
haemolymphatic fluid | 8.14e-13 | 15 |
organism substance | 8.14e-13 | 15 |
hemopoietic organ | 3.36e-12 | 7 |
immune organ | 3.36e-12 | 7 |
thymus | 4.29e-08 | 4 |
hemolymphoid system gland | 4.29e-08 | 4 |
thymic region | 4.29e-08 | 4 |
pharyngeal gland | 4.29e-08 | 4 |
thymus primordium | 4.29e-08 | 4 |
hematopoietic system | 5.90e-08 | 98 |
blood island | 5.90e-08 | 98 |
hemolymphoid system | 7.70e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.30e-07 | 51 |
immune system cancer | 5.30e-07 | 51 |
chronic leukemia | 6.40e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.