FFCP PHASE1:Hg19::chr10:38146669..38146685,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!2.86e-19!140;CL:0000542!2.27e-17!53;CL:0000051!2.27e-17!53;CL:0000838!2.39e-17!52;CL:0000988!2.21e-15!182;CL:0002087!3.12e-15!119;CL:0002031!6.68e-15!124;CL:0000037!2.11e-14!172;CL:0000566!2.11e-14!172;CL:0002032!5.18e-13!165;CL:0000837!5.18e-13!165;CL:0000791!4.61e-11!18;CL:0000789!4.61e-11!18;CL:0002420!4.61e-11!18;CL:0002419!4.61e-11!18;CL:0000790!4.61e-11!18;CL:0000084!1.42e-08!25;CL:0000827!1.42e-08!25;CL:0000945!2.40e-08!24;CL:0000826!2.40e-08!24;CL:0000236!3.57e-08!14;CL:0000625!1.17e-07!11 | |ontology_enrichment_celltype=CL:0000738!2.86e-19!140;CL:0000542!2.27e-17!53;CL:0000051!2.27e-17!53;CL:0000838!2.39e-17!52;CL:0000988!2.21e-15!182;CL:0002087!3.12e-15!119;CL:0002031!6.68e-15!124;CL:0000037!2.11e-14!172;CL:0000566!2.11e-14!172;CL:0002032!5.18e-13!165;CL:0000837!5.18e-13!165;CL:0000791!4.61e-11!18;CL:0000789!4.61e-11!18;CL:0002420!4.61e-11!18;CL:0002419!4.61e-11!18;CL:0000790!4.61e-11!18;CL:0000084!1.42e-08!25;CL:0000827!1.42e-08!25;CL:0000945!2.40e-08!24;CL:0000826!2.40e-08!24;CL:0000236!3.57e-08!14;CL:0000625!1.17e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.33e-14;18!CL:0000789;1.33e-14;18!CL:0002419;1.33e-14;18!CL:0000542;2.36e-14;53!CL:0000084;4.96e-12;25!CL:0000236;4.28e-11;13!CL:0000945;1.30e-10;24!CL:0000625;2.48e-10;11!CL:0000624;3.51e-07;6 | |ontology_enrichment_celltype_v019=CL:0000791;1.33e-14;18!CL:0000789;1.33e-14;18!CL:0002419;1.33e-14;18!CL:0000542;2.36e-14;53!CL:0000084;4.96e-12;25!CL:0000236;4.28e-11;13!CL:0000945;1.30e-10;24!CL:0000625;2.48e-10;11!CL:0000624;3.51e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.16e-24,52;CL:0000542,1.35e-23,53;CL:0000051,1.35e-23,53;CL:0000738,5.56e-20,136;CL:0002031,1.08e-15,120;CL:0000988,1.20e-15,177;CL:0002087,1.75e-15,115;CL:0000791,6.04e-15,18;CL:0000789,6.04e-15,18;CL:0002420,6.04e-15,18;CL:0002419,6.04e-15,18;CL:0000790,6.04e-15,18;CL:0000037,9.09e-15,168;CL:0002032,2.09e-13,161;CL:0000837,2.09e-13,161;CL:0000084,1.43e-12,25;CL:0000827,1.43e-12,25;CL:0000236,2.25e-11,14;CL:0000625,9.96e-11,11;CL:0000945,1.85e-10,24;CL:0000826,1.85e-10,24;CL:0000624,3.84e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.33e-14;18!CL:0000051;2.36e-14;53 | |ontology_enrichment_development_v019=CL:0000790;1.33e-14;18!CL:0000051;2.36e-14;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.37e-07,56;UBERON:0005068,1.37e-07,56;UBERON:0006241,1.37e-07,56;UBERON:0007135,1.37e-07,56;UBERON:0000073,3.33e-07,53;UBERON:0002616,3.33e-07,53;UBERON:0002420,8.44e-07,9;UBERON:0007245,8.44e-07,9;UBERON:0010009,8.44e-07,9;UBERON:0010011,8.44e-07,9;UBERON:0000454,8.44e-07,9 | |||
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| ||
|short_description=p1@ENST00000429214 | |short_description=p1@ENST00000429214 | ||
}} | }} |
Revision as of 04:20, 21 November 2012
Short description: | p1@ENST00000429214 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000429214_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000429214_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.16e-24 | 52 |
lymphocyte | 1.35e-23 | 53 |
common lymphoid progenitor | 1.35e-23 | 53 |
leukocyte | 5.56e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 1.08e-15 | 120 |
hematopoietic cell | 1.20e-15 | 177 |
nongranular leukocyte | 1.75e-15 | 115 |
mature alpha-beta T cell | 6.04e-15 | 18 |
alpha-beta T cell | 6.04e-15 | 18 |
immature T cell | 6.04e-15 | 18 |
mature T cell | 6.04e-15 | 18 |
immature alpha-beta T cell | 6.04e-15 | 18 |
hematopoietic stem cell | 9.09e-15 | 168 |
hematopoietic oligopotent progenitor cell | 2.09e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-13 | 161 |
T cell | 1.43e-12 | 25 |
pro-T cell | 1.43e-12 | 25 |
B cell | 2.25e-11 | 14 |
CD8-positive, alpha-beta T cell | 9.96e-11 | 11 |
lymphocyte of B lineage | 1.85e-10 | 24 |
pro-B cell | 1.85e-10 | 24 |
CD4-positive, alpha-beta T cell | 3.84e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.37e-07 | 56 |
neural rod | 1.37e-07 | 56 |
future spinal cord | 1.37e-07 | 56 |
neural keel | 1.37e-07 | 56 |
regional part of nervous system | 3.33e-07 | 53 |
regional part of brain | 3.33e-07 | 53 |
basal ganglion | 8.44e-07 | 9 |
nuclear complex of neuraxis | 8.44e-07 | 9 |
aggregate regional part of brain | 8.44e-07 | 9 |
collection of basal ganglia | 8.44e-07 | 9 |
cerebral subcortex | 8.44e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.