FFCP PHASE1:Hg19::chr10:8006992..8007014,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83860|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=17303|TSSclassifier=N|UniProt=|association_with_transcript=219bp_to_BC024661_5end|description=CAGE_peak_2_at_TAF3_5end|id=chr10:8006992..8007014,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000623;8.79e-07;3|ontology_enrichment_celltype_v019_2=CL:0000623,7.03e-07,3;CL:0000825,7.03e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!7.75e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.95e-12!57;UBERON:0005068!7.95e-12!57;UBERON:0006241!7.95e-12!57;UBERON:0007135!7.95e-12!57;UBERON:0001017!2.37e-10!82;UBERON:0000955!1.46e-09!69;UBERON:0006238!1.46e-09!69;UBERON:0005743!1.47e-09!86;UBERON:0003080!2.85e-09!42;UBERON:0002780!5.74e-09!41;UBERON:0001890!5.74e-09!41;UBERON:0006240!5.74e-09!41;UBERON:0000073!1.58e-08!94;UBERON:0001016!1.58e-08!94;UBERON:0007023!4.53e-08!115;UBERON:0002616!6.69e-08!59;UBERON:0002020!6.90e-08!34;UBERON:0003528!6.90e-08!34;UBERON:0001893!3.61e-07!34;UBERON:0002791!4.59e-07!33;UBERON:0002346!5.26e-07!90;UBERON:0003075!9.72e-07!86;UBERON:0007284!9.72e-07!86|ontology_enrichment_uberon_v019=UBERON:0003528;8.21e-08;34!UBERON:0002020;8.21e-08;34!UBERON:0002619;5.09e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.23e-11,81;UBERON:0000955,2.05e-11,68;UBERON:0006238,2.05e-11,68;UBERON:0001049,2.20e-11,56;UBERON:0005068,2.20e-11,56;UBERON:0006241,2.20e-11,56;UBERON:0007135,2.20e-11,56;UBERON:0001016,1.10e-10,89;UBERON:0000073,8.44e-10,53;UBERON:0002616,8.44e-10,53;UBERON:0003528,2.00e-09,34;UBERON:0002020,2.00e-09,34;UBERON:0002346,1.36e-08,86;UBERON:0003075,1.69e-08,82;UBERON:0007284,1.69e-08,82;UBERON:0002791,2.36e-07,32;UBERON:0002619,3.68e-07,22;UBERON:0002780,4.09e-07,41;UBERON:0001890,4.09e-07,41;UBERON:0003080,4.09e-07,41;UBERON:0006240,4.09e-07,41;UBERON:0011216,4.75e-07,223;UBERON:0001893,9.16e-07,34|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0,0,0,0.522371256399677,0,0,0.436882744260345,0,0,0,0.672325146451775,0,0,2.43966399395253,0.123121058076788,0,0,0,0.410623275218653,0.251085279189606,0.916960868975415,0.246301768349837,0.157421562627358,0.393364276848904,0,0.154816123316076,0,0,0.369754010166788,0.697204805222715,0.853015394924529,0,0.553995408531877,0.802177789880567,0.651032612147555,0.223915474239924,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0.929119112685311,0.575384784644301,0.512321413058201,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0,0,1.27867425159808,0,0.199463657621632,0.852449501065388,0.290209238628584,0,0,0.502497330513487,1.0429658368404,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0,0.336985893439485,0.450530678524519,0.48217676009124,0,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0.983548850569165,1.17903228824749,3.28962398399215,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0.883817722424512,0.664601683750863,0.541607727530031,1.15282187753108,0.910415432919148,1.15106533222573,0.276350017785848,1.15921234294021,1.4828656316206,0,0,0.679856056185397,0.383220493601921,1.37450978193052,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0.821127996921047,2.82249440514625,2.67440195783507,2.75166367377318,0,0,0.12786256184353,2.1686349143074,0,0.579386075843295,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.327447688744282,0,0.370784442784429,0,0,0.664789802594326,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,0.496971951695318,0.633152558322899,0.132409180813219,0,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0.312160076830321,0,0.747243402759005,0,0,0.280901613404497,0.204154171254893,0.368502951935304,0.413303124703062,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0.211931901159562,0,0.103052529238439,0.257640540045629,0.37223371266318,0.168776332241266,0,0.504867548488229,0.0920498986422993,0.80823028409406,0.355009592516614,0,0,0,0,0,0.609868530647977,0.397589304964456,0.580969714347592,0.518305275076852,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.354920400119532,0.337169380156203,0.482022059766964,0.441175890929576,0.435758888184812,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0.882926198829301,0.368965315629341,0,0,0,0.502644862058154,0.462942225792648,0.651616610620649,1.03993478527958,0,0.34779121492523,0,0.288732895522148,0.462985512576611,1.14152491340759,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0.16798212819886,0.141775097242386,1.07470227243418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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17303 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=219bp_to_BC024661_5end | |||
|description=CAGE_peak_2_at_TAF3_5end | |||
|id=chr10:8006992..8007014,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;8.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.03e-07,3;CL:0000825,7.03e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.75e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.95e-12!57;UBERON:0005068!7.95e-12!57;UBERON:0006241!7.95e-12!57;UBERON:0007135!7.95e-12!57;UBERON:0001017!2.37e-10!82;UBERON:0000955!1.46e-09!69;UBERON:0006238!1.46e-09!69;UBERON:0005743!1.47e-09!86;UBERON:0003080!2.85e-09!42;UBERON:0002780!5.74e-09!41;UBERON:0001890!5.74e-09!41;UBERON:0006240!5.74e-09!41;UBERON:0000073!1.58e-08!94;UBERON:0001016!1.58e-08!94;UBERON:0007023!4.53e-08!115;UBERON:0002616!6.69e-08!59;UBERON:0002020!6.90e-08!34;UBERON:0003528!6.90e-08!34;UBERON:0001893!3.61e-07!34;UBERON:0002791!4.59e-07!33;UBERON:0002346!5.26e-07!90;UBERON:0003075!9.72e-07!86;UBERON:0007284!9.72e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.21e-08;34!UBERON:0002020;8.21e-08;34!UBERON:0002619;5.09e-07;22 | |||
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| |||
|short_description=p2@TAF3 | |||
}} |
Revision as of 14:30, 10 September 2013
Short description: | p2@TAF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TAF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 219bp_to_BC024661_5end |
EntrezGene: | TAF3 |
HGNC: | 17303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 7.03e-07 | 3 |
pro-NK cell | 7.03e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.23e-11 | 81 |
brain | 2.05e-11 | 68 |
future brain | 2.05e-11 | 68 |
neural tube | 2.20e-11 | 56 |
neural rod | 2.20e-11 | 56 |
future spinal cord | 2.20e-11 | 56 |
neural keel | 2.20e-11 | 56 |
nervous system | 1.10e-10 | 89 |
regional part of nervous system | 8.44e-10 | 53 |
regional part of brain | 8.44e-10 | 53 |
brain grey matter | 2.00e-09 | 34 |
gray matter | 2.00e-09 | 34 |
neurectoderm | 1.36e-08 | 86 |
neural plate | 1.69e-08 | 82 |
presumptive neural plate | 1.69e-08 | 82 |
regional part of telencephalon | 2.36e-07 | 32 |
regional part of cerebral cortex | 3.68e-07 | 22 |
regional part of forebrain | 4.09e-07 | 41 |
forebrain | 4.09e-07 | 41 |
anterior neural tube | 4.09e-07 | 41 |
future forebrain | 4.09e-07 | 41 |
organ system subdivision | 4.75e-07 | 223 |
telencephalon | 9.16e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.